Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
CCNA1P78396 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
CCNA1P78396 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
CCNA1P78396 SNURFL-201ENST00000309296 343 ntBASIC6.11□□□□□ -1.43
CCNA1P78396 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
CCNA1P78396 RNA5SP123-201ENST00000363244 119 ntBASIC6.11□□□□□ -1.43
CCNA1P78396 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC6.11□□□□□ -1.43
CCNA1P78396 AL078599.1-201ENST00000402075 293 ntBASIC6.11□□□□□ -1.43
CCNA1P78396 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC6.11□□□□□ -1.43
CCNA1P78396 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC6.11□□□□□ -1.43
CCNA1P78396 MGAT2P2-201ENST00000427194 797 ntBASIC6.11□□□□□ -1.43
CCNA1P78396 RPL34P27-201ENST00000428810 349 ntBASIC6.11□□□□□ -1.43
CCNA1P78396 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC6.11□□□□□ -1.43
CCNA1P78396 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC6.11□□□□□ -1.43
CCNA1P78396 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC6.11□□□□□ -1.43
CCNA1P78396 RPS3AP53-201ENST00000454716 778 ntBASIC6.11□□□□□ -1.43
CCNA1P78396 PSAT1P4-201ENST00000466500 526 ntBASIC6.11□□□□□ -1.43
CCNA1P78396 AC097484.1-201ENST00000471148 389 ntBASIC6.11□□□□□ -1.43
CCNA1P78396 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC6.11□□□□□ -1.43
CCNA1P78396 RPS17P5-201ENST00000498293 408 ntBASIC6.11□□□□□ -1.43
CCNA1P78396 ASNSP4-201ENST00000511103 447 ntBASIC6.11□□□□□ -1.43
CCNA1P78396 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC6.11□□□□□ -1.43
CCNA1P78396 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC6.11□□□□□ -1.43
CCNA1P78396 AP002373.2-201ENST00000541631 1060 ntBASIC6.11□□□□□ -1.43
CCNA1P78396 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC6.11□□□□□ -1.43
CCNA1P78396 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
CCNA1P78396 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC6.11□□□□□ -1.43
CCNA1P78396 AC093799.2-201ENST00000610062 578 ntBASIC6.11□□□□□ -1.43
CCNA1P78396 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
CCNA1P78396 AC073869.8-201ENST00000641806 335 ntBASIC6.11□□□□□ -1.43
CCNA1P78396 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
CCNA1P78396 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
CCNA1P78396 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
CCNA1P78396 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
CCNA1P78396 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC6.11□□□□□ -1.43
CCNA1P78396 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
CCNA1P78396 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC6.11□□□□□ -1.43
CCNA1P78396 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
CCNA1P78396 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
CCNA1P78396 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
CCNA1P78396 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC6.1□□□□□ -1.43
CCNA1P78396 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
CCNA1P78396 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
CCNA1P78396 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
CCNA1P78396 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC6.1□□□□□ -1.43
CCNA1P78396 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC6.1□□□□□ -1.43
CCNA1P78396 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC6.1□□□□□ -1.43
CCNA1P78396 SNORA56-201ENST00000383966 129 ntBASIC6.1□□□□□ -1.43
CCNA1P78396 NUDT19P3-201ENST00000404698 555 ntBASIC6.1□□□□□ -1.43
CCNA1P78396 RPS26P38-201ENST00000414476 348 ntBASIC6.1□□□□□ -1.43
CCNA1P78396 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC6.1□□□□□ -1.43
CCNA1P78396 RPL31P44-201ENST00000447680 377 ntBASIC6.1□□□□□ -1.43
CCNA1P78396 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
CCNA1P78396 AC104634.1-201ENST00000452720 462 ntBASIC6.1□□□□□ -1.43
CCNA1P78396 AC092647.2-201ENST00000452998 253 ntBASIC6.1□□□□□ -1.43
CCNA1P78396 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
CCNA1P78396 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC6.1□□□□□ -1.43
CCNA1P78396 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC6.1□□□□□ -1.43
CCNA1P78396 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC6.1□□□□□ -1.43
CCNA1P78396 AC012400.1-201ENST00000518452 381 ntBASIC6.1□□□□□ -1.43
CCNA1P78396 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC6.1□□□□□ -1.43
CCNA1P78396 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC6.1□□□□□ -1.43
CCNA1P78396 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC6.1□□□□□ -1.43
CCNA1P78396 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC6.1□□□□□ -1.43
CCNA1P78396 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC6.1□□□□□ -1.43
CCNA1P78396 AL138960.1-201ENST00000613838 513 ntBASIC6.1□□□□□ -1.43
CCNA1P78396 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC6.1□□□□□ -1.43
CCNA1P78396 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
CCNA1P78396 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC6.1□□□□□ -1.43
CCNA1P78396 DPY19L2P2-203ENST00000435536 1858 ntBASIC6.1□□□□□ -1.43
CCNA1P78396 AP005432.1-201ENST00000580891 3485 ntBASIC6.1□□□□□ -1.43
CCNA1P78396 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
CCNA1P78396 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
CCNA1P78396 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
CCNA1P78396 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
CCNA1P78396 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
CCNA1P78396 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC6.09□□□□□ -1.43
CCNA1P78396 AC092747.4-201ENST00000620519 1861 ntBASIC6.09□□□□□ -1.43
CCNA1P78396 AC011933.2-201ENST00000578539 2790 ntBASIC6.09□□□□□ -1.43
CCNA1P78396 C5orf51-204ENST00000612065 1391 ntTSL 5 BASIC6.09□□□□□ -1.43
CCNA1P78396 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
CCNA1P78396 RN7SKP104-201ENST00000362605 328 ntBASIC6.09□□□□□ -1.43
CCNA1P78396 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.43
CCNA1P78396 DDX39BP1-205ENST00000422507 192 ntBASIC6.09□□□□□ -1.43
CCNA1P78396 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC6.09□□□□□ -1.43
CCNA1P78396 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC6.09□□□□□ -1.43
CCNA1P78396 snoU13.20-201ENST00000459180 104 ntBASIC6.09□□□□□ -1.43
CCNA1P78396 AC092324.1-201ENST00000468671 324 ntBASIC6.09□□□□□ -1.43
CCNA1P78396 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC6.09□□□□□ -1.43
CCNA1P78396 RN7SKP260-201ENST00000516907 149 ntBASIC6.09□□□□□ -1.43
CCNA1P78396 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC6.09□□□□□ -1.43
CCNA1P78396 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC6.09□□□□□ -1.43
CCNA1P78396 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
CCNA1P78396 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC6.09□□□□□ -1.43
CCNA1P78396 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
CCNA1P78396 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
CCNA1P78396 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC6.09□□□□□ -1.43
CCNA1P78396 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC6.09□□□□□ -1.43
CCNA1P78396 AC010435.1-201ENST00000623353 1177 ntBASIC6.09□□□□□ -1.43
CCNA1P78396 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC6.09□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 133.6 ms