Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 CASC19-221ENST00000641309 1382 ntBASIC3.58□□□□□ -1.84
RPL39P62891 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
RPL39P62891 AC090181.3-201ENST00000624777 1514 ntBASIC3.58□□□□□ -1.84
RPL39P62891 GTDC1-212ENST00000463875 1563 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
RPL39P62891 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
RPL39P62891 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC3.58□□□□□ -1.84
RPL39P62891 AC092747.4-201ENST00000620519 1861 ntBASIC3.58□□□□□ -1.84
RPL39P62891 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
RPL39P62891 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
RPL39P62891 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC3.57□□□□□ -1.84
RPL39P62891 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC3.57□□□□□ -1.84
RPL39P62891 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
RPL39P62891 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
RPL39P62891 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
RPL39P62891 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
RPL39P62891 FPGT-TNNI3K-201ENST00000370893 1195 ntTSL 2 BASIC3.57□□□□□ -1.84
RPL39P62891 MRRF-207ENST00000373729 870 ntTSL 3 BASIC3.57□□□□□ -1.84
RPL39P62891 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
RPL39P62891 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC3.57□□□□□ -1.84
RPL39P62891 AC068138.1-201ENST00000412635 217 ntBASIC3.57□□□□□ -1.84
RPL39P62891 OR2AT2P-201ENST00000413438 905 ntBASIC3.57□□□□□ -1.84
RPL39P62891 OR6E1P-201ENST00000414424 923 ntBASIC3.57□□□□□ -1.84
RPL39P62891 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC3.57□□□□□ -1.84
RPL39P62891 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC3.57□□□□□ -1.84
RPL39P62891 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
RPL39P62891 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC3.57□□□□□ -1.84
RPL39P62891 PQLC2L-202ENST00000426338 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
RPL39P62891 AC007283.1-201ENST00000434645 445 ntTSL 5 BASIC3.57□□□□□ -1.84
RPL39P62891 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC3.57□□□□□ -1.84
RPL39P62891 RPS29P10-201ENST00000439197 166 ntBASIC3.57□□□□□ -1.84
RPL39P62891 AC004980.3-201ENST00000447046 365 ntBASIC3.57□□□□□ -1.84
RPL39P62891 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC3.57□□□□□ -1.84
RPL39P62891 CYCSP34-201ENST00000458172 304 ntBASIC3.57□□□□□ -1.84
RPL39P62891 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC3.57□□□□□ -1.84
RPL39P62891 RPL9P15-201ENST00000491096 532 ntBASIC3.57□□□□□ -1.84
RPL39P62891 RN7SL346P-201ENST00000491561 294 ntBASIC3.57□□□□□ -1.84
RPL39P62891 CBX1-205ENST00000495350 550 ntTSL 2 BASIC3.57□□□□□ -1.84
RPL39P62891 AC006499.4-201ENST00000510947 694 ntBASIC3.57□□□□□ -1.84
RPL39P62891 AK6-204ENST00000512561 587 ntTSL 5 BASIC3.57□□□□□ -1.84
RPL39P62891 ENPP7P9-201ENST00000514456 627 ntBASIC3.57□□□□□ -1.84
RPL39P62891 NRBF2P4-201ENST00000520874 850 ntBASIC3.57□□□□□ -1.84
RPL39P62891 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC3.57□□□□□ -1.84
RPL39P62891 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC3.57□□□□□ -1.84
RPL39P62891 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC3.57□□□□□ -1.84
RPL39P62891 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC3.57□□□□□ -1.84
RPL39P62891 LINC02281-201ENST00000549013 375 ntTSL 3 BASIC3.57□□□□□ -1.84
RPL39P62891 BLZF2P-201ENST00000553776 1130 ntBASIC3.57□□□□□ -1.84
RPL39P62891 AL049830.4-201ENST00000555149 351 ntBASIC3.57□□□□□ -1.84
RPL39P62891 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC3.57□□□□□ -1.84
RPL39P62891 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC3.57□□□□□ -1.84
RPL39P62891 AC068446.1-201ENST00000556425 1549 ntBASIC3.57□□□□□ -1.84
RPL39P62891 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC3.57□□□□□ -1.84
RPL39P62891 AC000068.2-201ENST00000608816 460 ntBASIC3.57□□□□□ -1.84
RPL39P62891 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC3.57□□□□□ -1.84
RPL39P62891 AC097641.3-201ENST00000613523 464 ntBASIC3.57□□□□□ -1.84
RPL39P62891 MIR6813-201ENST00000621638 56 ntBASIC3.57□□□□□ -1.84
RPL39P62891 AL683826.1-201ENST00000624104 627 ntBASIC3.57□□□□□ -1.84
RPL39P62891 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC3.57□□□□□ -1.84
RPL39P62891 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC3.57□□□□□ -1.84
RPL39P62891 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
RPL39P62891 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC3.57□□□□□ -1.84
RPL39P62891 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
RPL39P62891 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
RPL39P62891 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
RPL39P62891 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
RPL39P62891 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
RPL39P62891 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
RPL39P62891 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
RPL39P62891 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
RPL39P62891 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC3.56□□□□□ -1.84
RPL39P62891 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC3.56□□□□□ -1.84
RPL39P62891 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC3.56□□□□□ -1.84
RPL39P62891 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC3.56□□□□□ -1.84
RPL39P62891 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
RPL39P62891 OR52B3P-201ENST00000314715 928 ntBASIC3.56□□□□□ -1.84
RPL39P62891 TMEM31-201ENST00000319560 728 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
RPL39P62891 ODF3-202ENST00000342593 386 ntTSL 5 BASIC3.56□□□□□ -1.84
RPL39P62891 SNORA2.3-201ENST00000383920 135 ntBASIC3.56□□□□□ -1.84
RPL39P62891 RN7SKP286-201ENST00000410894 299 ntBASIC3.56□□□□□ -1.84
RPL39P62891 GABARAPL3-201ENST00000412799 354 ntBASIC3.56□□□□□ -1.84
RPL39P62891 AC106900.1-201ENST00000418620 456 ntTSL 5 BASIC3.56□□□□□ -1.84
RPL39P62891 REREP1Y-201ENST00000422655 198 ntBASIC3.56□□□□□ -1.84
RPL39P62891 AC069154.1-201ENST00000432914 542 ntBASIC3.56□□□□□ -1.84
RPL39P62891 AC110602.1-201ENST00000437414 318 ntBASIC3.56□□□□□ -1.84
RPL39P62891 REREP2Y-201ENST00000439103 200 ntBASIC3.56□□□□□ -1.84
RPL39P62891 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC3.56□□□□□ -1.84
RPL39P62891 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC3.56□□□□□ -1.84
RPL39P62891 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC3.56□□□□□ -1.84
RPL39P62891 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC3.56□□□□□ -1.84
RPL39P62891 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
RPL39P62891 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC3.56□□□□□ -1.84
RPL39P62891 AC011476.1-201ENST00000466725 307 ntBASIC3.56□□□□□ -1.84
RPL39P62891 SIAH1P1-201ENST00000479411 923 ntBASIC3.56□□□□□ -1.84
RPL39P62891 EEF1A1P25-201ENST00000495704 1267 ntBASIC3.56□□□□□ -1.84
RPL39P62891 NPM1P21-201ENST00000513394 762 ntBASIC3.56□□□□□ -1.84
RPL39P62891 RNA5SP373-201ENST00000517271 95 ntBASIC3.56□□□□□ -1.84
RPL39P62891 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC3.56□□□□□ -1.84
RPL39P62891 HMGB1P40-201ENST00000525121 540 ntBASIC3.56□□□□□ -1.84
RPL39P62891 CCDC60-203ENST00000536742 886 ntAPPRIS ALT2 TSL 2 BASIC3.56□□□□□ -1.84
RPL39P62891 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms