Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
APOC4P55056 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
APOC4P55056 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
APOC4P55056 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
APOC4P55056 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
APOC4P55056 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC4.12□□□□□ -1.75
APOC4P55056 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC4.12□□□□□ -1.75
APOC4P55056 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC4.12□□□□□ -1.75
APOC4P55056 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
APOC4P55056 MFSD8-239ENST00000641590 2479 ntBASIC4.12□□□□□ -1.75
APOC4P55056 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
APOC4P55056 SOCS5P3-201ENST00000425115 1576 ntBASIC4.12□□□□□ -1.75
APOC4P55056 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
APOC4P55056 RNU4-7P-201ENST00000364758 141 ntBASIC4.12□□□□□ -1.75
APOC4P55056 RN7SKP6-201ENST00000364795 319 ntBASIC4.12□□□□□ -1.75
APOC4P55056 GNG5P2-201ENST00000372054 207 ntBASIC4.12□□□□□ -1.75
APOC4P55056 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
APOC4P55056 RNA5SP91-201ENST00000390902 119 ntBASIC4.12□□□□□ -1.75
APOC4P55056 RN7SKP59-201ENST00000410520 314 ntBASIC4.12□□□□□ -1.75
APOC4P55056 AC093084.1-201ENST00000424233 687 ntBASIC4.12□□□□□ -1.75
APOC4P55056 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC4.12□□□□□ -1.75
APOC4P55056 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC4.12□□□□□ -1.75
APOC4P55056 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC4.12□□□□□ -1.75
APOC4P55056 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC4.12□□□□□ -1.75
APOC4P55056 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC4.12□□□□□ -1.75
APOC4P55056 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC4.12□□□□□ -1.75
APOC4P55056 RPS11P7-201ENST00000442125 465 ntBASIC4.12□□□□□ -1.75
APOC4P55056 AL591363.1-201ENST00000450091 483 ntBASIC4.12□□□□□ -1.75
APOC4P55056 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC4.12□□□□□ -1.75
APOC4P55056 MTND3P4-201ENST00000453537 303 ntBASIC4.12□□□□□ -1.75
APOC4P55056 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC4.12□□□□□ -1.75
APOC4P55056 AC026348.1-201ENST00000462549 1053 ntBASIC4.12□□□□□ -1.75
APOC4P55056 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
APOC4P55056 EIF1P7-201ENST00000487533 337 ntBASIC4.12□□□□□ -1.75
APOC4P55056 ENSA-211ENST00000503345 793 ntTSL 3 BASIC4.12□□□□□ -1.75
APOC4P55056 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC4.12□□□□□ -1.75
APOC4P55056 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC4.12□□□□□ -1.75
APOC4P55056 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC4.12□□□□□ -1.75
APOC4P55056 AC026616.1-201ENST00000523157 525 ntBASIC4.12□□□□□ -1.75
APOC4P55056 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC4.12□□□□□ -1.75
APOC4P55056 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC4.12□□□□□ -1.75
APOC4P55056 CASC22-201ENST00000569713 386 ntTSL 5 BASIC4.12□□□□□ -1.75
APOC4P55056 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
APOC4P55056 SUMO2P15-201ENST00000604285 278 ntBASIC4.12□□□□□ -1.75
APOC4P55056 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC4.12□□□□□ -1.75
APOC4P55056 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
APOC4P55056 AC007620.3-201ENST00000608131 497 ntBASIC4.12□□□□□ -1.75
APOC4P55056 OR51C1P-201ENST00000608504 942 ntBASIC4.12□□□□□ -1.75
APOC4P55056 AP000864.1-201ENST00000609424 650 ntBASIC4.12□□□□□ -1.75
APOC4P55056 AC004241.3-201ENST00000611728 517 ntBASIC4.12□□□□□ -1.75
APOC4P55056 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC4.12□□□□□ -1.75
APOC4P55056 AC022467.1-201ENST00000614738 749 ntBASIC4.12□□□□□ -1.75
APOC4P55056 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
APOC4P55056 MIR6886-201ENST00000619864 61 ntBASIC4.12□□□□□ -1.75
APOC4P55056 CGA-206ENST00000630630 832 ntTSL 2 BASIC4.12□□□□□ -1.75
APOC4P55056 UGP2-232ENST00000640075 567 ntTSL 5 BASIC4.12□□□□□ -1.75
APOC4P55056 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
APOC4P55056 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC4.12□□□□□ -1.75
APOC4P55056 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC4.12□□□□□ -1.75
APOC4P55056 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.12□□□□□ -1.75
APOC4P55056 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
APOC4P55056 EEF1A1P30-201ENST00000429708 1315 ntBASIC4.12□□□□□ -1.75
APOC4P55056 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
APOC4P55056 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC4.12□□□□□ -1.75
APOC4P55056 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
APOC4P55056 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC4.12□□□□□ -1.75
APOC4P55056 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
APOC4P55056 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
APOC4P55056 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
APOC4P55056 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC4.12□□□□□ -1.75
APOC4P55056 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC4.12□□□□□ -1.75
APOC4P55056 AL121950.1-201ENST00000624993 2077 ntBASIC4.12□□□□□ -1.75
APOC4P55056 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
APOC4P55056 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC4.12□□□□□ -1.75
APOC4P55056 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
APOC4P55056 RARSP1-201ENST00000542842 1418 ntBASIC4.12□□□□□ -1.75
APOC4P55056 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
APOC4P55056 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC4.11□□□□□ -1.75
APOC4P55056 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC4.11□□□□□ -1.75
APOC4P55056 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
APOC4P55056 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
APOC4P55056 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC4.11□□□□□ -1.75
APOC4P55056 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC4.11□□□□□ -1.75
APOC4P55056 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
APOC4P55056 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
APOC4P55056 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
APOC4P55056 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
APOC4P55056 PWAR1-201ENST00000624188 2414 ntBASIC4.11□□□□□ -1.75
APOC4P55056 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
APOC4P55056 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC4.11□□□□□ -1.75
APOC4P55056 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
APOC4P55056 MIR7-1-201ENST00000384871 110 ntBASIC4.11□□□□□ -1.75
APOC4P55056 AL391361.1-201ENST00000405580 489 ntBASIC4.11□□□□□ -1.75
APOC4P55056 AL009179.1-201ENST00000406085 265 ntBASIC4.11□□□□□ -1.75
APOC4P55056 NPM1P4-201ENST00000414095 812 ntBASIC4.11□□□□□ -1.75
APOC4P55056 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC4.11□□□□□ -1.75
APOC4P55056 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC4.11□□□□□ -1.75
APOC4P55056 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC4.11□□□□□ -1.75
APOC4P55056 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC4.11□□□□□ -1.75
APOC4P55056 GAPDHP48-201ENST00000436626 961 ntBASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms