Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC6.03□□□□□ -1.44
HMGCS2P54868 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC6.03□□□□□ -1.44
HMGCS2P54868 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC6.03□□□□□ -1.44
HMGCS2P54868 TEK-204ENST00000519097 3836 ntTSL 2 BASIC6.03□□□□□ -1.44
HMGCS2P54868 AL162431.4-201ENST00000604674 411 ntBASIC6.03□□□□□ -1.44
HMGCS2P54868 MEMO1P5-201ENST00000604810 406 ntBASIC6.03□□□□□ -1.44
HMGCS2P54868 AP005131.7-201ENST00000610087 611 ntBASIC6.03□□□□□ -1.44
HMGCS2P54868 uc_338.7-201ENST00000621834 124 ntBASIC6.03□□□□□ -1.44
HMGCS2P54868 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
HMGCS2P54868 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC6.03□□□□□ -1.44
HMGCS2P54868 OR52B5P-204ENST00000641744 3467 ntBASIC6.03□□□□□ -1.44
HMGCS2P54868 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC6.03□□□□□ -1.44
HMGCS2P54868 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
HMGCS2P54868 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
HMGCS2P54868 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC6.02□□□□□ -1.45
HMGCS2P54868 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC6.02□□□□□ -1.45
HMGCS2P54868 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC6.02□□□□□ -1.45
HMGCS2P54868 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC6.02□□□□□ -1.45
HMGCS2P54868 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC6.02□□□□□ -1.45
HMGCS2P54868 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
HMGCS2P54868 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC6.02□□□□□ -1.45
HMGCS2P54868 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
HMGCS2P54868 MIR192-201ENST00000384915 110 ntBASIC6.02□□□□□ -1.45
HMGCS2P54868 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC6.02□□□□□ -1.45
HMGCS2P54868 LINC02506-201ENST00000513211 734 ntTSL 3 BASIC6.02□□□□□ -1.45
HMGCS2P54868 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC6.02□□□□□ -1.45
HMGCS2P54868 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC6.02□□□□□ -1.45
HMGCS2P54868 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC6.02□□□□□ -1.45
HMGCS2P54868 OR7E128P-201ENST00000532736 1024 ntBASIC6.02□□□□□ -1.45
HMGCS2P54868 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC6.02□□□□□ -1.45
HMGCS2P54868 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
HMGCS2P54868 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC6.02□□□□□ -1.45
HMGCS2P54868 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC6.02□□□□□ -1.45
HMGCS2P54868 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC6.02□□□□□ -1.45
HMGCS2P54868 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC6.02□□□□□ -1.45
HMGCS2P54868 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
HMGCS2P54868 AP004289.1-201ENST00000436307 2205 ntBASIC6.02□□□□□ -1.45
HMGCS2P54868 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC6.02□□□□□ -1.45
HMGCS2P54868 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC6.02□□□□□ -1.45
HMGCS2P54868 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
HMGCS2P54868 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC6.01□□□□□ -1.45
HMGCS2P54868 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
HMGCS2P54868 AL117378.2-201ENST00000622916 1337 ntBASIC6.01□□□□□ -1.45
HMGCS2P54868 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
HMGCS2P54868 USP8-204ENST00000425032 3559 ntTSL 2 BASIC6.01□□□□□ -1.45
HMGCS2P54868 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
HMGCS2P54868 TINAG-201ENST00000259782 1754 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
HMGCS2P54868 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC6.01□□□□□ -1.45
HMGCS2P54868 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC6.01□□□□□ -1.45
HMGCS2P54868 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
HMGCS2P54868 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
HMGCS2P54868 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
HMGCS2P54868 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
HMGCS2P54868 AL590139.1-201ENST00000416267 400 ntBASIC6.01□□□□□ -1.45
HMGCS2P54868 AC245028.1-201ENST00000423259 256 ntBASIC6.01□□□□□ -1.45
HMGCS2P54868 AL590399.2-201ENST00000427536 309 ntBASIC6.01□□□□□ -1.45
HMGCS2P54868 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC6.01□□□□□ -1.45
HMGCS2P54868 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC6.01□□□□□ -1.45
HMGCS2P54868 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC6.01□□□□□ -1.45
HMGCS2P54868 RN7SL244P-201ENST00000493405 297 ntBASIC6.01□□□□□ -1.45
HMGCS2P54868 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
HMGCS2P54868 COX6B1P5-201ENST00000509843 249 ntBASIC6.01□□□□□ -1.45
HMGCS2P54868 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC6.01□□□□□ -1.45
HMGCS2P54868 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC6.01□□□□□ -1.45
HMGCS2P54868 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
HMGCS2P54868 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC6.01□□□□□ -1.45
HMGCS2P54868 AF230666.2-201ENST00000602328 725 ntBASIC6.01□□□□□ -1.45
HMGCS2P54868 AL133406.3-201ENST00000606817 541 ntBASIC6.01□□□□□ -1.45
HMGCS2P54868 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC6.01□□□□□ -1.45
HMGCS2P54868 MIR378J-201ENST00000611988 109 ntBASIC6.01□□□□□ -1.45
HMGCS2P54868 AC105105.5-201ENST00000622635 1294 ntBASIC6.01□□□□□ -1.45
HMGCS2P54868 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC6.01□□□□□ -1.45
HMGCS2P54868 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
HMGCS2P54868 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
HMGCS2P54868 ZFX-202ENST00000338565 2906 ntTSL 5 BASIC6.01□□□□□ -1.45
HMGCS2P54868 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
HMGCS2P54868 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC6□□□□□ -1.45
HMGCS2P54868 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC6□□□□□ -1.45
HMGCS2P54868 TMPRSS11F-201ENST00000356291 2088 ntAPPRIS P1 TSL 2 BASIC6□□□□□ -1.45
HMGCS2P54868 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC6□□□□□ -1.45
HMGCS2P54868 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC6□□□□□ -1.45
HMGCS2P54868 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC6□□□□□ -1.45
HMGCS2P54868 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC6□□□□□ -1.45
HMGCS2P54868 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC6□□□□□ -1.45
HMGCS2P54868 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC6□□□□□ -1.45
HMGCS2P54868 AC112498.1-201ENST00000444401 332 ntBASIC6□□□□□ -1.45
HMGCS2P54868 AC073072.2-201ENST00000447425 348 ntBASIC6□□□□□ -1.45
HMGCS2P54868 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC6□□□□□ -1.45
HMGCS2P54868 AC093827.1-201ENST00000480094 861 ntBASIC6□□□□□ -1.45
HMGCS2P54868 RN7SL459P-201ENST00000481078 302 ntBASIC6□□□□□ -1.45
HMGCS2P54868 AC006427.1-201ENST00000514359 712 ntBASIC6□□□□□ -1.45
HMGCS2P54868 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC6□□□□□ -1.45
HMGCS2P54868 LDHBP3-201ENST00000514909 822 ntBASIC6□□□□□ -1.45
HMGCS2P54868 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC6□□□□□ -1.45
HMGCS2P54868 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC6□□□□□ -1.45
HMGCS2P54868 OR4A17P-201ENST00000526032 904 ntBASIC6□□□□□ -1.45
HMGCS2P54868 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC6□□□□□ -1.45
HMGCS2P54868 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC6□□□□□ -1.45
HMGCS2P54868 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC6□□□□□ -1.45
HMGCS2P54868 AP001267.4-201ENST00000602598 545 ntBASIC6□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms