Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 AL133325.1-201ENST00000421090 382 ntBASIC5.35□□□□□ -1.55
PDX1P52945 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC5.35□□□□□ -1.55
PDX1P52945 AJ239321.1-201ENST00000424255 564 ntBASIC5.35□□□□□ -1.55
PDX1P52945 VN1R21P-201ENST00000426703 765 ntBASIC5.35□□□□□ -1.55
PDX1P52945 MTATP6P11-201ENST00000428071 670 ntBASIC5.35□□□□□ -1.55
PDX1P52945 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC5.35□□□□□ -1.55
PDX1P52945 PSMD10P3-201ENST00000437000 448 ntBASIC5.35□□□□□ -1.55
PDX1P52945 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC5.35□□□□□ -1.55
PDX1P52945 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
PDX1P52945 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC5.35□□□□□ -1.55
PDX1P52945 RPS23P1-201ENST00000491662 432 ntBASIC5.35□□□□□ -1.55
PDX1P52945 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC5.35□□□□□ -1.55
PDX1P52945 COL6A4P2-205ENST00000509855 506 ntBASIC5.35□□□□□ -1.55
PDX1P52945 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC5.35□□□□□ -1.55
PDX1P52945 NPM1P52-201ENST00000518264 846 ntBASIC5.35□□□□□ -1.55
PDX1P52945 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC5.35□□□□□ -1.55
PDX1P52945 OR5D2P-201ENST00000524390 911 ntBASIC5.35□□□□□ -1.55
PDX1P52945 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
PDX1P52945 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC5.35□□□□□ -1.55
PDX1P52945 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC5.35□□□□□ -1.55
PDX1P52945 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
PDX1P52945 OR11J2P-201ENST00000555298 907 ntBASIC5.35□□□□□ -1.55
PDX1P52945 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC5.35□□□□□ -1.55
PDX1P52945 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC5.35□□□□□ -1.55
PDX1P52945 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC5.35□□□□□ -1.55
PDX1P52945 AC126915.2-201ENST00000610957 190 ntBASIC5.35□□□□□ -1.55
PDX1P52945 AL121612.2-201ENST00000612261 482 ntBASIC5.35□□□□□ -1.55
PDX1P52945 AC090510.2-201ENST00000617465 629 ntBASIC5.35□□□□□ -1.55
PDX1P52945 AC009032.1-201ENST00000617574 431 ntBASIC5.35□□□□□ -1.55
PDX1P52945 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
PDX1P52945 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC5.35□□□□□ -1.55
PDX1P52945 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
PDX1P52945 AC140134.1-201ENST00000511830 3544 ntBASIC5.35□□□□□ -1.55
PDX1P52945 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
PDX1P52945 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.35□□□□□ -1.55
PDX1P52945 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
PDX1P52945 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
PDX1P52945 AC232271.1-201ENST00000602455 2715 ntBASIC5.35□□□□□ -1.55
PDX1P52945 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
PDX1P52945 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC5.35□□□□□ -1.55
PDX1P52945 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
PDX1P52945 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
PDX1P52945 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
PDX1P52945 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
PDX1P52945 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC5.35□□□□□ -1.55
PDX1P52945 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
PDX1P52945 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC5.34□□□□□ -1.55
PDX1P52945 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.55
PDX1P52945 AL132656.3-201ENST00000606384 1595 ntBASIC5.34□□□□□ -1.55
PDX1P52945 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
PDX1P52945 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
PDX1P52945 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
PDX1P52945 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
PDX1P52945 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.55
PDX1P52945 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.34□□□□□ -1.55
PDX1P52945 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
PDX1P52945 AC005261.6-201ENST00000623072 1387 ntBASIC5.34□□□□□ -1.55
PDX1P52945 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
PDX1P52945 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
PDX1P52945 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC5.34□□□□□ -1.55
PDX1P52945 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
PDX1P52945 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
PDX1P52945 RPL23P2-201ENST00000320371 421 ntBASIC5.34□□□□□ -1.55
PDX1P52945 MIR133B-201ENST00000362210 119 ntBASIC5.34□□□□□ -1.55
PDX1P52945 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
PDX1P52945 GLS-203ENST00000409215 632 ntTSL 4 BASIC5.34□□□□□ -1.55
PDX1P52945 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC5.34□□□□□ -1.55
PDX1P52945 ARAFP1-201ENST00000422172 605 ntBASIC5.34□□□□□ -1.55
PDX1P52945 AC108075.1-201ENST00000424692 529 ntBASIC5.34□□□□□ -1.55
PDX1P52945 AL590623.1-201ENST00000427864 105 ntBASIC5.34□□□□□ -1.55
PDX1P52945 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC5.34□□□□□ -1.55
PDX1P52945 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC5.34□□□□□ -1.55
PDX1P52945 MTCO1P57-201ENST00000432182 261 ntBASIC5.34□□□□□ -1.55
PDX1P52945 MTCO3P43-201ENST00000440974 771 ntBASIC5.34□□□□□ -1.55
PDX1P52945 MORF4L1P4-201ENST00000450245 976 ntBASIC5.34□□□□□ -1.55
PDX1P52945 RPL35AP28-201ENST00000459730 331 ntBASIC5.34□□□□□ -1.55
PDX1P52945 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC5.34□□□□□ -1.55
PDX1P52945 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
PDX1P52945 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC5.34□□□□□ -1.55
PDX1P52945 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC5.34□□□□□ -1.55
PDX1P52945 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC5.34□□□□□ -1.55
PDX1P52945 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC5.34□□□□□ -1.55
PDX1P52945 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
PDX1P52945 AC012414.2-201ENST00000559474 187 ntBASIC5.34□□□□□ -1.55
PDX1P52945 MIR3691-201ENST00000578066 90 ntBASIC5.34□□□□□ -1.55
PDX1P52945 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
PDX1P52945 MIR4311-201ENST00000580794 100 ntBASIC5.34□□□□□ -1.55
PDX1P52945 Mico1.1-201ENST00000611698 204 ntBASIC5.34□□□□□ -1.55
PDX1P52945 AC026367.3-201ENST00000619032 590 ntBASIC5.34□□□□□ -1.55
PDX1P52945 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC5.34□□□□□ -1.55
PDX1P52945 AC091948.2-201ENST00000636510 279 ntBASIC5.34□□□□□ -1.55
PDX1P52945 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
PDX1P52945 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
PDX1P52945 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC5.34□□□□□ -1.55
PDX1P52945 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
PDX1P52945 NLRP3P1-201ENST00000622303 1785 ntBASIC5.34□□□□□ -1.56
PDX1P52945 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC5.34□□□□□ -1.56
PDX1P52945 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
PDX1P52945 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
PDX1P52945 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 84 ms