Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 AC095055.1-201ENST00000603472 1113 ntBASIC5.68□□□□□ -1.5
LHX1P48742 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC5.68□□□□□ -1.5
LHX1P48742 AC016911.1-201ENST00000613297 452 ntBASIC5.68□□□□□ -1.5
LHX1P48742 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC5.68□□□□□ -1.5
LHX1P48742 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC5.68□□□□□ -1.5
LHX1P48742 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC5.68□□□□□ -1.5
LHX1P48742 SAMMSON-227ENST00000642114 1199 ntBASIC5.68□□□□□ -1.5
LHX1P48742 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC5.68□□□□□ -1.5
LHX1P48742 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
LHX1P48742 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.68□□□□□ -1.5
LHX1P48742 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
LHX1P48742 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
LHX1P48742 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
LHX1P48742 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
LHX1P48742 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.68□□□□□ -1.5
LHX1P48742 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC5.67□□□□□ -1.5
LHX1P48742 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
LHX1P48742 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC5.67□□□□□ -1.5
LHX1P48742 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
LHX1P48742 C4BPAP1-201ENST00000415474 1893 ntBASIC5.67□□□□□ -1.5
LHX1P48742 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC5.67□□□□□ -1.5
LHX1P48742 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
LHX1P48742 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
LHX1P48742 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.67□□□□□ -1.5
LHX1P48742 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.67□□□□□ -1.5
LHX1P48742 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
LHX1P48742 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
LHX1P48742 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
LHX1P48742 U3.2-201ENST00000362981 210 ntBASIC5.67□□□□□ -1.5
LHX1P48742 RNU1-43P-201ENST00000365052 165 ntBASIC5.67□□□□□ -1.5
LHX1P48742 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
LHX1P48742 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
LHX1P48742 MIR105-2-201ENST00000385083 81 ntBASIC5.67□□□□□ -1.5
LHX1P48742 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC5.67□□□□□ -1.5
LHX1P48742 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC5.67□□□□□ -1.5
LHX1P48742 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC5.67□□□□□ -1.5
LHX1P48742 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC5.67□□□□□ -1.5
LHX1P48742 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC5.67□□□□□ -1.5
LHX1P48742 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC5.67□□□□□ -1.5
LHX1P48742 AC099670.2-201ENST00000435130 321 ntBASIC5.67□□□□□ -1.5
LHX1P48742 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC5.67□□□□□ -1.5
LHX1P48742 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
LHX1P48742 SNRPCP3-201ENST00000474888 476 ntBASIC5.67□□□□□ -1.5
LHX1P48742 AP000797.2-201ENST00000475768 606 ntBASIC5.67□□□□□ -1.5
LHX1P48742 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC5.67□□□□□ -1.5
LHX1P48742 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC5.67□□□□□ -1.5
LHX1P48742 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC5.67□□□□□ -1.5
LHX1P48742 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC5.67□□□□□ -1.5
LHX1P48742 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC5.67□□□□□ -1.5
LHX1P48742 AC022832.1-201ENST00000530718 645 ntBASIC5.67□□□□□ -1.5
LHX1P48742 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
LHX1P48742 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC5.67□□□□□ -1.5
LHX1P48742 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC5.67□□□□□ -1.5
LHX1P48742 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC5.67□□□□□ -1.5
LHX1P48742 AP002505.2-201ENST00000623585 696 ntBASIC5.67□□□□□ -1.5
LHX1P48742 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
LHX1P48742 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.67□□□□□ -1.5
LHX1P48742 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC5.67□□□□□ -1.5
LHX1P48742 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
LHX1P48742 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
LHX1P48742 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC5.67□□□□□ -1.5
LHX1P48742 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC5.67□□□□□ -1.5
LHX1P48742 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC5.67□□□□□ -1.5
LHX1P48742 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
LHX1P48742 AC079298.1-201ENST00000625026 1619 ntBASIC5.66□□□□□ -1.5
LHX1P48742 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC5.66□□□□□ -1.5
LHX1P48742 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
LHX1P48742 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
LHX1P48742 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC5.66□□□□□ -1.5
LHX1P48742 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
LHX1P48742 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
LHX1P48742 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC5.66□□□□□ -1.5
LHX1P48742 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
LHX1P48742 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
LHX1P48742 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
LHX1P48742 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
LHX1P48742 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
LHX1P48742 AL158827.1-201ENST00000416300 391 ntBASIC5.66□□□□□ -1.5
LHX1P48742 AC023271.1-201ENST00000445936 1090 ntBASIC5.66□□□□□ -1.5
LHX1P48742 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC5.66□□□□□ -1.5
LHX1P48742 AC104634.1-201ENST00000452720 462 ntBASIC5.66□□□□□ -1.5
LHX1P48742 AL389915.2-201ENST00000454576 441 ntBASIC5.66□□□□□ -1.5
LHX1P48742 Z92846.1-201ENST00000456203 268 ntBASIC5.66□□□□□ -1.5
LHX1P48742 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC5.66□□□□□ -1.5
LHX1P48742 RN7SL222P-201ENST00000476452 299 ntBASIC5.66□□□□□ -1.5
LHX1P48742 RPS24P16-201ENST00000497294 392 ntBASIC5.66□□□□□ -1.5
LHX1P48742 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC5.66□□□□□ -1.5
LHX1P48742 SNRPCP2-201ENST00000504370 475 ntBASIC5.66□□□□□ -1.5
LHX1P48742 AC022360.1-201ENST00000521058 340 ntBASIC5.66□□□□□ -1.5
LHX1P48742 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC5.66□□□□□ -1.5
LHX1P48742 AC016180.1-201ENST00000567945 403 ntBASIC5.66□□□□□ -1.5
LHX1P48742 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC5.66□□□□□ -1.5
LHX1P48742 IGLCOR22-2-201ENST00000605398 313 ntBASIC5.66□□□□□ -1.5
LHX1P48742 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC5.66□□□□□ -1.5
LHX1P48742 OR7M1P-201ENST00000608946 533 ntBASIC5.66□□□□□ -1.5
LHX1P48742 AL121612.2-201ENST00000612261 482 ntBASIC5.66□□□□□ -1.5
LHX1P48742 MIR6133-201ENST00000617057 108 ntBASIC5.66□□□□□ -1.5
LHX1P48742 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC5.66□□□□□ -1.5
LHX1P48742 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
LHX1P48742 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 122.8 ms