Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 RFPL4AP6-201ENST00000616792 846 ntBASIC5.19□□□□□ -1.58
SOX2P48431 AL122023.1-201ENST00000622847 530 ntBASIC5.19□□□□□ -1.58
SOX2P48431 AC099654.15-201ENST00000639802 509 ntBASIC5.19□□□□□ -1.58
SOX2P48431 UGP2-232ENST00000640075 567 ntTSL 5 BASIC5.19□□□□□ -1.58
SOX2P48431 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC5.19□□□□□ -1.58
SOX2P48431 AC079776.5-201ENST00000641920 211 ntBASIC5.19□□□□□ -1.58
SOX2P48431 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.19□□□□□ -1.58
SOX2P48431 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
SOX2P48431 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SOX2P48431 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC5.19□□□□□ -1.58
SOX2P48431 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.19□□□□□ -1.58
SOX2P48431 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SOX2P48431 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SOX2P48431 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
SOX2P48431 AC232271.1-201ENST00000602455 2715 ntBASIC5.18□□□□□ -1.58
SOX2P48431 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.18□□□□□ -1.58
SOX2P48431 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC5.18□□□□□ -1.58
SOX2P48431 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
SOX2P48431 MTND5P23-201ENST00000430812 1655 ntBASIC5.18□□□□□ -1.58
SOX2P48431 AC245100.2-201ENST00000454544 1679 ntBASIC5.18□□□□□ -1.58
SOX2P48431 AC126755.2-201ENST00000545114 1522 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SOX2P48431 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
SOX2P48431 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SOX2P48431 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.18□□□□□ -1.58
SOX2P48431 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SOX2P48431 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SOX2P48431 GRXCR2-201ENST00000377976 2002 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
SOX2P48431 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SOX2P48431 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
SOX2P48431 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SOX2P48431 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SOX2P48431 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SOX2P48431 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
SOX2P48431 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SOX2P48431 TERB2-201ENST00000340827 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SOX2P48431 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
SOX2P48431 RNA5SP453-201ENST00000362503 119 ntBASIC5.18□□□□□ -1.58
SOX2P48431 AL132875.1-201ENST00000403623 949 ntBASIC5.18□□□□□ -1.58
SOX2P48431 AC233289.1-201ENST00000403700 508 ntBASIC5.18□□□□□ -1.58
SOX2P48431 SNRPEP6-201ENST00000407465 277 ntBASIC5.18□□□□□ -1.58
SOX2P48431 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
SOX2P48431 RNA5SP231-201ENST00000410496 138 ntBASIC5.18□□□□□ -1.58
SOX2P48431 AL445213.1-201ENST00000412589 747 ntBASIC5.18□□□□□ -1.58
SOX2P48431 AC107081.1-201ENST00000414975 361 ntBASIC5.18□□□□□ -1.58
SOX2P48431 MEAF6P1-201ENST00000416092 327 ntBASIC5.18□□□□□ -1.58
SOX2P48431 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC5.18□□□□□ -1.58
SOX2P48431 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC5.18□□□□□ -1.58
SOX2P48431 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC5.18□□□□□ -1.58
SOX2P48431 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC5.18□□□□□ -1.58
SOX2P48431 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SOX2P48431 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SOX2P48431 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC5.18□□□□□ -1.58
SOX2P48431 AC136489.1-203ENST00000450246 736 ntTSL 5 BASIC5.18□□□□□ -1.58
SOX2P48431 ZNF886P-201ENST00000450781 723 ntBASIC5.18□□□□□ -1.58
SOX2P48431 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC5.18□□□□□ -1.58
SOX2P48431 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC5.18□□□□□ -1.58
SOX2P48431 AC104164.1-201ENST00000460282 590 ntBASIC5.18□□□□□ -1.58
SOX2P48431 RPL38P3-201ENST00000484463 213 ntBASIC5.18□□□□□ -1.58
SOX2P48431 AC083795.1-201ENST00000491760 320 ntBASIC5.18□□□□□ -1.58
SOX2P48431 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC5.18□□□□□ -1.58
SOX2P48431 AC008413.2-201ENST00000507398 342 ntTSL 3 BASIC5.18□□□□□ -1.58
SOX2P48431 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC5.18□□□□□ -1.58
SOX2P48431 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC5.18□□□□□ -1.58
SOX2P48431 AC095052.1-201ENST00000509955 863 ntBASIC5.18□□□□□ -1.58
SOX2P48431 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC5.18□□□□□ -1.58
SOX2P48431 RNA5SP434-201ENST00000516647 121 ntBASIC5.18□□□□□ -1.58
SOX2P48431 AC037450.1-201ENST00000518129 647 ntTSL 3 BASIC5.18□□□□□ -1.58
SOX2P48431 IGHV7-34-1-201ENST00000519200 350 ntBASIC5.18□□□□□ -1.58
SOX2P48431 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC5.18□□□□□ -1.58
SOX2P48431 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC5.18□□□□□ -1.58
SOX2P48431 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC5.18□□□□□ -1.58
SOX2P48431 AC131935.1-201ENST00000524621 333 ntBASIC5.18□□□□□ -1.58
SOX2P48431 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SOX2P48431 CASP1P2-201ENST00000526830 1258 ntBASIC5.18□□□□□ -1.58
SOX2P48431 CASP1-216ENST00000534497 825 ntTSL 5 BASIC5.18□□□□□ -1.58
SOX2P48431 TDGP1-201ENST00000543961 1229 ntBASIC5.18□□□□□ -1.58
SOX2P48431 AC009097.3-201ENST00000563557 1018 ntBASIC5.18□□□□□ -1.58
SOX2P48431 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
SOX2P48431 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC5.18□□□□□ -1.58
SOX2P48431 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC5.18□□□□□ -1.58
SOX2P48431 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5.18□□□□□ -1.58
SOX2P48431 MIR212-201ENST00000586026 110 ntBASIC5.18□□□□□ -1.58
SOX2P48431 AC012593.1-208ENST00000587791 696 ntTSL 5 BASIC5.18□□□□□ -1.58
SOX2P48431 AC063977.7-201ENST00000594454 337 ntBASIC5.18□□□□□ -1.58
SOX2P48431 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC5.18□□□□□ -1.58
SOX2P48431 AC114878.2-201ENST00000604863 1251 ntBASIC5.18□□□□□ -1.58
SOX2P48431 RPSAP75-201ENST00000605848 301 ntBASIC5.18□□□□□ -1.58
SOX2P48431 AL355974.3-201ENST00000617383 467 ntBASIC5.18□□□□□ -1.58
SOX2P48431 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC5.18□□□□□ -1.58
SOX2P48431 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC5.18□□□□□ -1.58
SOX2P48431 FRG1EP-201ENST00000634469 770 ntBASIC5.18□□□□□ -1.58
SOX2P48431 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SOX2P48431 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.18□□□□□ -1.58
SOX2P48431 SLC10A7-204ENST00000502607 1638 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SOX2P48431 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SOX2P48431 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SOX2P48431 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC5.18□□□□□ -1.58
SOX2P48431 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.18□□□□□ -1.58
SOX2P48431 NXF4-202ENST00000416098 1465 ntBASIC5.18□□□□□ -1.58
SOX2P48431 AC217777.1-201ENST00000570034 1471 ntBASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 96.3 ms