Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CXCL12P48061 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
CXCL12P48061 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CXCL12P48061 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CXCL12P48061 ATP5A1P1-201ENST00000454088 1321 ntBASIC5.27□□□□□ -1.57
CXCL12P48061 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
CXCL12P48061 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CXCL12P48061 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.27□□□□□ -1.57
CXCL12P48061 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5.27□□□□□ -1.57
CXCL12P48061 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.27□□□□□ -1.57
CXCL12P48061 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC5.27□□□□□ -1.57
CXCL12P48061 CDKL4-201ENST00000378803 1567 ntAPPRIS P2 TSL 1 (best) BASIC5.27□□□□□ -1.57
CXCL12P48061 DBIP1-201ENST00000401435 260 ntBASIC5.27□□□□□ -1.57
CXCL12P48061 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CXCL12P48061 AC119751.6-201ENST00000416712 186 ntBASIC5.27□□□□□ -1.57
CXCL12P48061 EI24P4-201ENST00000423683 1078 ntBASIC5.27□□□□□ -1.57
CXCL12P48061 OR10T1P-201ENST00000424327 947 ntBASIC5.27□□□□□ -1.57
CXCL12P48061 AC068287.1-201ENST00000430283 295 ntBASIC5.27□□□□□ -1.57
CXCL12P48061 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC5.27□□□□□ -1.57
CXCL12P48061 RPS29P10-201ENST00000439197 166 ntBASIC5.27□□□□□ -1.57
CXCL12P48061 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC5.27□□□□□ -1.57
CXCL12P48061 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC5.27□□□□□ -1.57
CXCL12P48061 AC009963.2-201ENST00000453431 138 ntBASIC5.27□□□□□ -1.57
CXCL12P48061 SNORD125-201ENST00000459538 96 ntBASIC5.27□□□□□ -1.57
CXCL12P48061 SLC25A51P1-201ENST00000468432 871 ntBASIC5.27□□□□□ -1.57
CXCL12P48061 RN7SL354P-201ENST00000469282 294 ntBASIC5.27□□□□□ -1.57
CXCL12P48061 AP000797.2-201ENST00000475768 606 ntBASIC5.27□□□□□ -1.57
CXCL12P48061 C1GALT1P3-201ENST00000522049 819 ntBASIC5.27□□□□□ -1.57
CXCL12P48061 ARL6IP1P3-201ENST00000524544 560 ntBASIC5.27□□□□□ -1.57
CXCL12P48061 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CXCL12P48061 AP006289.1-201ENST00000538089 277 ntBASIC5.27□□□□□ -1.57
CXCL12P48061 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CXCL12P48061 UBE2FP2-201ENST00000566646 462 ntBASIC5.27□□□□□ -1.57
CXCL12P48061 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC5.27□□□□□ -1.57
CXCL12P48061 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC5.27□□□□□ -1.57
CXCL12P48061 AC005034.3-201ENST00000604845 1747 ntBASIC5.27□□□□□ -1.57
CXCL12P48061 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC5.27□□□□□ -1.57
CXCL12P48061 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC5.27□□□□□ -1.57
CXCL12P48061 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC5.27□□□□□ -1.57
CXCL12P48061 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CXCL12P48061 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC5.27□□□□□ -1.57
CXCL12P48061 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CXCL12P48061 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
CXCL12P48061 SELE-204ENST00000367776 3576 ntTSL 5 BASIC5.27□□□□□ -1.57
CXCL12P48061 SELE-205ENST00000367777 3576 ntTSL 5 BASIC5.27□□□□□ -1.57
CXCL12P48061 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
CXCL12P48061 LINC01138-208ENST00000639159 1521 ntTSL 5 BASIC5.27□□□□□ -1.57
CXCL12P48061 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CXCL12P48061 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC5.27□□□□□ -1.57
CXCL12P48061 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CXCL12P48061 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CXCL12P48061 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CXCL12P48061 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
CXCL12P48061 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC5.26□□□□□ -1.57
CXCL12P48061 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CXCL12P48061 CDY3P-201ENST00000454543 1618 ntBASIC5.26□□□□□ -1.57
CXCL12P48061 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CXCL12P48061 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CXCL12P48061 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC5.26□□□□□ -1.57
CXCL12P48061 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
CXCL12P48061 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CXCL12P48061 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC5.26□□□□□ -1.57
CXCL12P48061 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
CXCL12P48061 ZCCHC6-204ENST00000375957 2262 ntTSL 2 BASIC5.26□□□□□ -1.57
CXCL12P48061 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CXCL12P48061 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CXCL12P48061 AC079741.1-201ENST00000321498 212 ntBASIC5.26□□□□□ -1.57
CXCL12P48061 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
CXCL12P48061 OR8V1P-201ENST00000395193 873 ntBASIC5.26□□□□□ -1.57
CXCL12P48061 Z97832.1-201ENST00000402490 328 ntBASIC5.26□□□□□ -1.57
CXCL12P48061 AP002530.1-201ENST00000405705 684 ntBASIC5.26□□□□□ -1.57
CXCL12P48061 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC5.26□□□□□ -1.57
CXCL12P48061 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC5.26□□□□□ -1.57
CXCL12P48061 AL606490.8-201ENST00000441624 319 ntBASIC5.26□□□□□ -1.57
CXCL12P48061 AC112498.1-201ENST00000444401 332 ntBASIC5.26□□□□□ -1.57
CXCL12P48061 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC5.26□□□□□ -1.57
CXCL12P48061 AL513533.1-201ENST00000453728 415 ntBASIC5.26□□□□□ -1.57
CXCL12P48061 AC079168.1-201ENST00000458741 345 ntBASIC5.26□□□□□ -1.57
CXCL12P48061 AC068587.1-201ENST00000483613 781 ntBASIC5.26□□□□□ -1.57
CXCL12P48061 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC5.26□□□□□ -1.57
CXCL12P48061 SUMO2P19-201ENST00000518920 295 ntBASIC5.26□□□□□ -1.57
CXCL12P48061 OR7E128P-201ENST00000532736 1024 ntBASIC5.26□□□□□ -1.57
CXCL12P48061 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC5.26□□□□□ -1.57
CXCL12P48061 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC5.26□□□□□ -1.57
CXCL12P48061 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC5.26□□□□□ -1.57
CXCL12P48061 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC5.26□□□□□ -1.57
CXCL12P48061 AC209154.1-201ENST00000582156 337 ntBASIC5.26□□□□□ -1.57
CXCL12P48061 AC009027.1-201ENST00000604510 479 ntBASIC5.26□□□□□ -1.57
CXCL12P48061 MIR6780A-201ENST00000615089 68 ntBASIC5.26□□□□□ -1.57
CXCL12P48061 AC009120.7-201ENST00000623452 780 ntBASIC5.26□□□□□ -1.57
CXCL12P48061 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
CXCL12P48061 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC5.26□□□□□ -1.57
CXCL12P48061 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CXCL12P48061 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
CXCL12P48061 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CXCL12P48061 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
CXCL12P48061 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CXCL12P48061 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC5.26□□□□□ -1.57
CXCL12P48061 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC5.26□□□□□ -1.57
CXCL12P48061 BPIFC-204ENST00000534972 1809 ntTSL 5 BASIC5.25□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 135.2 ms