Protein–RNA interactions for Protein: P47902

CDX1, Homeobox protein CDX-1, humanhuman

Predicted RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1P47902 AC113412.1-201ENST00000425840 504 ntBASIC4.75□□□□□ -1.65
CDX1P47902 DPY19L1P2-201ENST00000426647 915 ntBASIC4.75□□□□□ -1.65
CDX1P47902 AC079807.1-201ENST00000429993 481 ntBASIC4.75□□□□□ -1.65
CDX1P47902 KCTD9P1-201ENST00000430462 1167 ntBASIC4.75□□□□□ -1.65
CDX1P47902 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC4.75□□□□□ -1.65
CDX1P47902 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC4.75□□□□□ -1.65
CDX1P47902 MTCYBP21-201ENST00000443300 1113 ntBASIC4.75□□□□□ -1.65
CDX1P47902 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC4.75□□□□□ -1.65
CDX1P47902 FTLP8-201ENST00000446770 267 ntBASIC4.75□□□□□ -1.65
CDX1P47902 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC4.75□□□□□ -1.65
CDX1P47902 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC4.75□□□□□ -1.65
CDX1P47902 EIF4A2P4-201ENST00000458691 1196 ntBASIC4.75□□□□□ -1.65
CDX1P47902 NDUFA5P5-201ENST00000468361 342 ntBASIC4.75□□□□□ -1.65
CDX1P47902 AC008410.1-201ENST00000483777 339 ntBASIC4.75□□□□□ -1.65
CDX1P47902 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC4.75□□□□□ -1.65
CDX1P47902 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC4.75□□□□□ -1.65
CDX1P47902 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC4.75□□□□□ -1.65
CDX1P47902 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC4.75□□□□□ -1.65
CDX1P47902 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC4.75□□□□□ -1.65
CDX1P47902 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC4.75□□□□□ -1.65
CDX1P47902 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC4.75□□□□□ -1.65
CDX1P47902 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC4.75□□□□□ -1.65
CDX1P47902 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC4.75□□□□□ -1.65
CDX1P47902 OSBPL9P3-201ENST00000534523 595 ntBASIC4.75□□□□□ -1.65
CDX1P47902 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC4.75□□□□□ -1.65
CDX1P47902 AC079905.1-201ENST00000549280 475 ntBASIC4.75□□□□□ -1.65
CDX1P47902 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC4.75□□□□□ -1.65
CDX1P47902 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC4.75□□□□□ -1.65
CDX1P47902 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC4.75□□□□□ -1.65
CDX1P47902 AC090826.1-203ENST00000569235 490 ntBASIC4.75□□□□□ -1.65
CDX1P47902 MIR3189-201ENST00000578735 73 ntBASIC4.75□□□□□ -1.65
CDX1P47902 CBX3P2-202ENST00000583365 535 ntBASIC4.75□□□□□ -1.65
CDX1P47902 AC027229.1-201ENST00000583887 253 ntBASIC4.75□□□□□ -1.65
CDX1P47902 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC4.75□□□□□ -1.65
CDX1P47902 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC4.75□□□□□ -1.65
CDX1P47902 AC067773.1-201ENST00000603284 1094 ntBASIC4.75□□□□□ -1.65
CDX1P47902 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC4.75□□□□□ -1.65
CDX1P47902 AC025175.1-201ENST00000606482 759 ntBASIC4.75□□□□□ -1.65
CDX1P47902 AL645933.2-201ENST00000606743 1207 ntBASIC4.75□□□□□ -1.65
CDX1P47902 AC141002.1-201ENST00000607025 279 ntBASIC4.75□□□□□ -1.65
CDX1P47902 AL391834.1-201ENST00000609609 560 ntBASIC4.75□□□□□ -1.65
CDX1P47902 AL365181.4-201ENST00000609800 547 ntBASIC4.75□□□□□ -1.65
CDX1P47902 AC110792.4-201ENST00000609843 298 ntBASIC4.75□□□□□ -1.65
CDX1P47902 AL512506.1-201ENST00000613918 449 ntBASIC4.75□□□□□ -1.65
CDX1P47902 AL445493.3-201ENST00000619568 477 ntBASIC4.75□□□□□ -1.65
CDX1P47902 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
CDX1P47902 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
CDX1P47902 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC4.75□□□□□ -1.65
CDX1P47902 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CDX1P47902 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CDX1P47902 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC4.75□□□□□ -1.65
CDX1P47902 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CDX1P47902 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC4.74□□□□□ -1.65
CDX1P47902 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
CDX1P47902 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC4.74□□□□□ -1.65
CDX1P47902 AP001541.1-201ENST00000623322 1904 ntBASIC4.74□□□□□ -1.65
CDX1P47902 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CDX1P47902 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CDX1P47902 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC4.74□□□□□ -1.65
CDX1P47902 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC4.74□□□□□ -1.65
CDX1P47902 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CDX1P47902 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
CDX1P47902 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
CDX1P47902 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CDX1P47902 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CDX1P47902 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC4.74□□□□□ -1.65
CDX1P47902 RNU105B-201ENST00000364478 208 ntBASIC4.74□□□□□ -1.65
CDX1P47902 RNU6-650P-201ENST00000365658 111 ntBASIC4.74□□□□□ -1.65
CDX1P47902 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC4.74□□□□□ -1.65
CDX1P47902 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC4.74□□□□□ -1.65
CDX1P47902 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CDX1P47902 RN7SKP97-201ENST00000410966 333 ntBASIC4.74□□□□□ -1.65
CDX1P47902 RNA5SP498-201ENST00000411342 120 ntBASIC4.74□□□□□ -1.65
CDX1P47902 CTSL3P-202ENST00000412179 788 ntBASIC4.74□□□□□ -1.65
CDX1P47902 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC4.74□□□□□ -1.65
CDX1P47902 OR5M12P-201ENST00000423388 929 ntBASIC4.74□□□□□ -1.65
CDX1P47902 AL160175.1-201ENST00000428124 247 ntBASIC4.74□□□□□ -1.65
CDX1P47902 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC4.74□□□□□ -1.65
CDX1P47902 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC4.74□□□□□ -1.65
CDX1P47902 ELOCP3-201ENST00000439303 348 ntBASIC4.74□□□□□ -1.65
CDX1P47902 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC4.74□□□□□ -1.65
CDX1P47902 AC005077.1-201ENST00000449226 375 ntBASIC4.74□□□□□ -1.65
CDX1P47902 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC4.74□□□□□ -1.65
CDX1P47902 RPL23AP60-201ENST00000450011 454 ntBASIC4.74□□□□□ -1.65
CDX1P47902 HMGB1P5-202ENST00000451497 985 ntBASIC4.74□□□□□ -1.65
CDX1P47902 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC4.74□□□□□ -1.65
CDX1P47902 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC4.74□□□□□ -1.65
CDX1P47902 AC107398.1-201ENST00000486904 505 ntBASIC4.74□□□□□ -1.65
CDX1P47902 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC4.74□□□□□ -1.65
CDX1P47902 ENPP7P11-201ENST00000505915 627 ntBASIC4.74□□□□□ -1.65
CDX1P47902 AC025458.1-201ENST00000506046 166 ntBASIC4.74□□□□□ -1.65
CDX1P47902 TOMM22P4-201ENST00000511318 336 ntBASIC4.74□□□□□ -1.65
CDX1P47902 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CDX1P47902 HAUS1P3-201ENST00000523909 662 ntBASIC4.74□□□□□ -1.65
CDX1P47902 TRIM77BP-201ENST00000524985 1119 ntBASIC4.74□□□□□ -1.65
CDX1P47902 AP003049.1-201ENST00000529418 457 ntBASIC4.74□□□□□ -1.65
CDX1P47902 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC4.74□□□□□ -1.65
CDX1P47902 ASB8-203ENST00000535988 679 ntTSL 2 BASIC4.74□□□□□ -1.65
CDX1P47902 AC079148.1-201ENST00000565944 819 ntBASIC4.74□□□□□ -1.65
CDX1P47902 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC4.74□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 127.9 ms