Protein–RNA interactions for Protein: P43378

PTPN9, Tyrosine-protein phosphatase non-receptor type 9, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9P43378 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC5.78□□□□□ -1.48
PTPN9P43378 FABP5P6-201ENST00000510588 409 ntBASIC5.78□□□□□ -1.48
PTPN9P43378 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC5.78□□□□□ -1.48
PTPN9P43378 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.78□□□□□ -1.48
PTPN9P43378 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC5.78□□□□□ -1.48
PTPN9P43378 IGLVIV-66-1-201ENST00000521832 460 ntBASIC5.78□□□□□ -1.48
PTPN9P43378 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC5.78□□□□□ -1.48
PTPN9P43378 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC5.78□□□□□ -1.48
PTPN9P43378 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC5.78□□□□□ -1.48
PTPN9P43378 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC5.78□□□□□ -1.48
PTPN9P43378 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
PTPN9P43378 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC5.78□□□□□ -1.48
PTPN9P43378 AC008147.3-201ENST00000548666 354 ntBASIC5.78□□□□□ -1.48
PTPN9P43378 MYL6-213ENST00000549017 502 ntTSL 3 BASIC5.78□□□□□ -1.48
PTPN9P43378 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
PTPN9P43378 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC5.78□□□□□ -1.48
PTPN9P43378 RBM22P12-201ENST00000567098 1255 ntBASIC5.78□□□□□ -1.48
PTPN9P43378 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC5.78□□□□□ -1.48
PTPN9P43378 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC5.78□□□□□ -1.48
PTPN9P43378 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC5.78□□□□□ -1.48
PTPN9P43378 BNIP3P27-201ENST00000599991 412 ntBASIC5.78□□□□□ -1.48
PTPN9P43378 AC012616.1-201ENST00000600294 197 ntBASIC5.78□□□□□ -1.48
PTPN9P43378 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC5.78□□□□□ -1.48
PTPN9P43378 HCG18-243ENST00000602498 327 ntTSL 3 BASIC5.78□□□□□ -1.48
PTPN9P43378 AC002069.2-201ENST00000603580 883 ntBASIC5.78□□□□□ -1.48
PTPN9P43378 AC007938.2-201ENST00000604666 2634 ntBASIC5.78□□□□□ -1.48
PTPN9P43378 AC127024.6-201ENST00000621598 424 ntBASIC5.78□□□□□ -1.48
PTPN9P43378 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
PTPN9P43378 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC5.78□□□□□ -1.48
PTPN9P43378 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
PTPN9P43378 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC5.78□□□□□ -1.48
PTPN9P43378 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.78□□□□□ -1.48
PTPN9P43378 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
PTPN9P43378 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
PTPN9P43378 AC079097.1-201ENST00000512187 1399 ntBASIC5.78□□□□□ -1.48
PTPN9P43378 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC5.78□□□□□ -1.48
PTPN9P43378 MAPK10-338ENST00000641647 3362 ntBASIC5.78□□□□□ -1.48
PTPN9P43378 AFP-201ENST00000226359 1914 ntTSL 5 BASIC5.78□□□□□ -1.48
PTPN9P43378 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
PTPN9P43378 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
PTPN9P43378 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC5.78□□□□□ -1.48
PTPN9P43378 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC5.77□□□□□ -1.49
PTPN9P43378 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
PTPN9P43378 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
PTPN9P43378 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
PTPN9P43378 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.77□□□□□ -1.49
PTPN9P43378 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC5.77□□□□□ -1.49
PTPN9P43378 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
PTPN9P43378 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
PTPN9P43378 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
PTPN9P43378 OFD1P8Y-201ENST00000449148 1433 ntBASIC5.77□□□□□ -1.49
PTPN9P43378 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
PTPN9P43378 AC092681.1-201ENST00000297369 291 ntBASIC5.77□□□□□ -1.49
PTPN9P43378 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
PTPN9P43378 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
PTPN9P43378 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC5.77□□□□□ -1.49
PTPN9P43378 RN7SKP6-201ENST00000364795 319 ntBASIC5.77□□□□□ -1.49
PTPN9P43378 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC5.77□□□□□ -1.49
PTPN9P43378 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
PTPN9P43378 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC5.77□□□□□ -1.49
PTPN9P43378 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC5.77□□□□□ -1.49
PTPN9P43378 AC073465.2-201ENST00000440938 498 ntBASIC5.77□□□□□ -1.49
PTPN9P43378 XKRY2-201ENST00000442362 1093 ntBASIC5.77□□□□□ -1.49
PTPN9P43378 AC092106.1-201ENST00000444291 373 ntBASIC5.77□□□□□ -1.49
PTPN9P43378 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC5.77□□□□□ -1.49
PTPN9P43378 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
PTPN9P43378 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC5.77□□□□□ -1.49
PTPN9P43378 AC074087.1-201ENST00000512059 724 ntBASIC5.77□□□□□ -1.49
PTPN9P43378 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC5.77□□□□□ -1.49
PTPN9P43378 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC5.77□□□□□ -1.49
PTPN9P43378 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC5.77□□□□□ -1.49
PTPN9P43378 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
PTPN9P43378 MIR4505-201ENST00000582238 73 ntBASIC5.77□□□□□ -1.49
PTPN9P43378 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC5.77□□□□□ -1.49
PTPN9P43378 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC5.77□□□□□ -1.49
PTPN9P43378 AC008521.2-201ENST00000591021 259 ntBASIC5.77□□□□□ -1.49
PTPN9P43378 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC5.77□□□□□ -1.49
PTPN9P43378 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC5.77□□□□□ -1.49
PTPN9P43378 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC5.77□□□□□ -1.49
PTPN9P43378 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC5.77□□□□□ -1.49
PTPN9P43378 QTRT1P1-201ENST00000604344 1078 ntBASIC5.77□□□□□ -1.49
PTPN9P43378 AC135178.6-201ENST00000605314 398 ntBASIC5.77□□□□□ -1.49
PTPN9P43378 RNA5SP440-201ENST00000612665 119 ntBASIC5.77□□□□□ -1.49
PTPN9P43378 MIR6133-201ENST00000617057 108 ntBASIC5.77□□□□□ -1.49
PTPN9P43378 AL445493.3-201ENST00000619568 477 ntBASIC5.77□□□□□ -1.49
PTPN9P43378 AC079298.2-201ENST00000623885 459 ntBASIC5.77□□□□□ -1.49
PTPN9P43378 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC5.77□□□□□ -1.49
PTPN9P43378 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
PTPN9P43378 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC5.77□□□□□ -1.49
PTPN9P43378 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.77□□□□□ -1.49
PTPN9P43378 SAMM50P1-201ENST00000455403 1399 ntBASIC5.77□□□□□ -1.49
PTPN9P43378 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC5.77□□□□□ -1.49
PTPN9P43378 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
PTPN9P43378 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.77□□□□□ -1.49
PTPN9P43378 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
PTPN9P43378 AL359715.3-201ENST00000569267 2123 ntBASIC5.77□□□□□ -1.49
PTPN9P43378 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
PTPN9P43378 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
PTPN9P43378 AL136520.1-201ENST00000600311 1322 ntBASIC5.76□□□□□ -1.49
PTPN9P43378 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC5.76□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms