Protein–RNA interactions for Protein: P37268

FDFT1, Squalene synthase, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1P37268 AC010245.2-201ENST00000606908 1167 ntBASIC5.4□□□□□ -1.54
FDFT1P37268 AL691477.1-201ENST00000624398 162 ntBASIC5.4□□□□□ -1.54
FDFT1P37268 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
FDFT1P37268 HYAL4-202ENST00000476325 1616 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
FDFT1P37268 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
FDFT1P37268 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
FDFT1P37268 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC5.4□□□□□ -1.55
FDFT1P37268 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC5.4□□□□□ -1.55
FDFT1P37268 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC5.4□□□□□ -1.55
FDFT1P37268 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
FDFT1P37268 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.39□□□□□ -1.55
FDFT1P37268 AL022322.2-201ENST00000624072 20397 ntBASIC5.39□□□□□ -1.55
FDFT1P37268 AC006210.2-201ENST00000367074 1545 ntBASIC5.39□□□□□ -1.55
FDFT1P37268 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
FDFT1P37268 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
FDFT1P37268 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
FDFT1P37268 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
FDFT1P37268 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
FDFT1P37268 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
FDFT1P37268 RNA5SP234-201ENST00000363916 119 ntBASIC5.39□□□□□ -1.55
FDFT1P37268 BPHL-201ENST00000380368 797 ntTSL 5 BASIC5.39□□□□□ -1.55
FDFT1P37268 MIR621-201ENST00000384919 96 ntBASIC5.39□□□□□ -1.55
FDFT1P37268 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC5.39□□□□□ -1.55
FDFT1P37268 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC5.39□□□□□ -1.55
FDFT1P37268 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC5.39□□□□□ -1.55
FDFT1P37268 AL161722.2-201ENST00000434731 981 ntBASIC5.39□□□□□ -1.55
FDFT1P37268 AC046176.1-201ENST00000435260 1170 ntBASIC5.39□□□□□ -1.55
FDFT1P37268 AC012512.1-201ENST00000446594 718 ntBASIC5.39□□□□□ -1.55
FDFT1P37268 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC5.39□□□□□ -1.55
FDFT1P37268 RPS27AP2-201ENST00000457576 465 ntBASIC5.39□□□□□ -1.55
FDFT1P37268 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC5.39□□□□□ -1.55
FDFT1P37268 EIF1P7-201ENST00000487533 337 ntBASIC5.39□□□□□ -1.55
FDFT1P37268 MYL12BP2-201ENST00000503948 512 ntBASIC5.39□□□□□ -1.55
FDFT1P37268 AC100784.1-201ENST00000522790 310 ntBASIC5.39□□□□□ -1.55
FDFT1P37268 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC5.39□□□□□ -1.55
FDFT1P37268 HMGB1P40-201ENST00000525121 540 ntBASIC5.39□□□□□ -1.55
FDFT1P37268 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC5.39□□□□□ -1.55
FDFT1P37268 OR8A2P-201ENST00000528631 952 ntBASIC5.39□□□□□ -1.55
FDFT1P37268 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC5.39□□□□□ -1.55
FDFT1P37268 AC006349.1-201ENST00000555526 235 ntBASIC5.39□□□□□ -1.55
FDFT1P37268 RN7SL708P-201ENST00000580952 299 ntBASIC5.39□□□□□ -1.55
FDFT1P37268 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC5.39□□□□□ -1.55
FDFT1P37268 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
FDFT1P37268 HOTTIP_3.1-201ENST00000619957 337 ntBASIC5.39□□□□□ -1.55
FDFT1P37268 AP005432.1-201ENST00000580891 3485 ntBASIC5.39□□□□□ -1.55
FDFT1P37268 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
FDFT1P37268 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
FDFT1P37268 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
FDFT1P37268 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.39□□□□□ -1.55
FDFT1P37268 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
FDFT1P37268 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.39□□□□□ -1.55
FDFT1P37268 AC133552.1-201ENST00000569988 4007 ntBASIC5.39□□□□□ -1.55
FDFT1P37268 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
FDFT1P37268 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
FDFT1P37268 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.39□□□□□ -1.55
FDFT1P37268 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC5.39□□□□□ -1.55
FDFT1P37268 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC5.39□□□□□ -1.55
FDFT1P37268 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
FDFT1P37268 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
FDFT1P37268 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
FDFT1P37268 BMPR1APS1-201ENST00000403332 1598 ntBASIC5.38□□□□□ -1.55
FDFT1P37268 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
FDFT1P37268 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
FDFT1P37268 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
FDFT1P37268 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
FDFT1P37268 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
FDFT1P37268 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
FDFT1P37268 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
FDFT1P37268 RNA5SP335-201ENST00000363817 110 ntBASIC5.38□□□□□ -1.55
FDFT1P37268 RN7SKP124-201ENST00000364730 341 ntBASIC5.38□□□□□ -1.55
FDFT1P37268 RNA5SP223-201ENST00000365174 120 ntBASIC5.38□□□□□ -1.55
FDFT1P37268 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
FDFT1P37268 AL391422.1-201ENST00000402155 436 ntBASIC5.38□□□□□ -1.55
FDFT1P37268 RN7SKP286-201ENST00000410894 299 ntBASIC5.38□□□□□ -1.55
FDFT1P37268 AL445213.1-201ENST00000412589 747 ntBASIC5.38□□□□□ -1.55
FDFT1P37268 AC211486.3-201ENST00000412694 621 ntBASIC5.38□□□□□ -1.55
FDFT1P37268 RPL31P15-201ENST00000449770 338 ntBASIC5.38□□□□□ -1.55
FDFT1P37268 BX842559.2-201ENST00000451418 605 ntBASIC5.38□□□□□ -1.55
FDFT1P37268 RANP1-206ENST00000455094 651 ntBASIC5.38□□□□□ -1.55
FDFT1P37268 AC021660.1-201ENST00000465006 554 ntBASIC5.38□□□□□ -1.55
FDFT1P37268 RN7SL189P-201ENST00000468631 289 ntBASIC5.38□□□□□ -1.55
FDFT1P37268 AC100832.1-201ENST00000471945 383 ntBASIC5.38□□□□□ -1.55
FDFT1P37268 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC5.38□□□□□ -1.55
FDFT1P37268 RN7SL447P-201ENST00000494711 245 ntBASIC5.38□□□□□ -1.55
FDFT1P37268 AC006427.1-201ENST00000514359 712 ntBASIC5.38□□□□□ -1.55
FDFT1P37268 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC5.38□□□□□ -1.55
FDFT1P37268 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC5.38□□□□□ -1.55
FDFT1P37268 KCTD9P6-201ENST00000522306 950 ntBASIC5.38□□□□□ -1.55
FDFT1P37268 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC5.38□□□□□ -1.55
FDFT1P37268 AC018767.2-201ENST00000562361 600 ntTSL 5 BASIC5.38□□□□□ -1.55
FDFT1P37268 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC5.38□□□□□ -1.55
FDFT1P37268 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC5.38□□□□□ -1.55
FDFT1P37268 RNA5SP440-201ENST00000612665 119 ntBASIC5.38□□□□□ -1.55
FDFT1P37268 RN7SL787P-201ENST00000613000 284 ntBASIC5.38□□□□□ -1.55
FDFT1P37268 AC127024.6-201ENST00000621598 424 ntBASIC5.38□□□□□ -1.55
FDFT1P37268 MTCO1P1-201ENST00000624263 1081 ntBASIC5.38□□□□□ -1.55
FDFT1P37268 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC5.38□□□□□ -1.55
FDFT1P37268 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC5.38□□□□□ -1.55
FDFT1P37268 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
FDFT1P37268 AC074101.1-201ENST00000637861 241 ntBASIC5.38□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 113 ms