Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC7.87□□□□□ -1.15
RXRBP28702 AC092807.3-203ENST00000467530 2745 ntTSL 2 BASIC7.87□□□□□ -1.15
RXRBP28702 IGF2BP3-201ENST00000258729 4250 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
RXRBP28702 NCAPH-205ENST00000455200 2952 ntAPPRIS ALT2 TSL 5 BASIC7.86□□□□□ -1.15
RXRBP28702 ZNF841-201ENST00000389534 3503 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
RXRBP28702 HDAC1P2-201ENST00000453661 1398 ntBASIC7.86□□□□□ -1.15
RXRBP28702 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC7.86□□□□□ -1.15
RXRBP28702 C11orf54-207ENST00000528288 4094 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
RXRBP28702 TEX14-203ENST00000389934 4927 ntAPPRIS P4 TSL 1 (best) BASIC7.86□□□□□ -1.15
RXRBP28702 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC7.86□□□□□ -1.15
RXRBP28702 MTIF2-201ENST00000263629 2528 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
RXRBP28702 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
RXRBP28702 MEF2C-244ENST00000636998 5936 ntTSL 5 BASIC7.86□□□□□ -1.15
RXRBP28702 NOS1-206ENST00000618760 12283 ntTSL 5 BASIC7.86□□□□□ -1.15
RXRBP28702 NDUFA4-201ENST00000339600 2130 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
RXRBP28702 Y_RNA.194-201ENST00000363985 102 ntBASIC7.86□□□□□ -1.15
RXRBP28702 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
RXRBP28702 AF274854.1-201ENST00000413236 615 ntBASIC7.86□□□□□ -1.15
RXRBP28702 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC7.86□□□□□ -1.15
RXRBP28702 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC7.86□□□□□ -1.15
RXRBP28702 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
RXRBP28702 USP9YP26-201ENST00000421008 661 ntBASIC7.86□□□□□ -1.15
RXRBP28702 AL157400.1-201ENST00000428166 368 ntTSL 5 BASIC7.86□□□□□ -1.15
RXRBP28702 AL360081.1-201ENST00000428299 555 ntBASIC7.86□□□□□ -1.15
RXRBP28702 CCNB1IP1P1-201ENST00000428976 839 ntBASIC7.86□□□□□ -1.15
RXRBP28702 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC7.86□□□□□ -1.15
RXRBP28702 NPM1P33-201ENST00000438918 872 ntBASIC7.86□□□□□ -1.15
RXRBP28702 FRG2FP-204ENST00000453982 852 ntBASIC7.86□□□□□ -1.15
RXRBP28702 OFD1P7Y-201ENST00000454643 1155 ntBASIC7.86□□□□□ -1.15
RXRBP28702 MTCO2P18-201ENST00000457151 658 ntBASIC7.86□□□□□ -1.15
RXRBP28702 AC090114.3-201ENST00000479267 829 ntBASIC7.86□□□□□ -1.15
RXRBP28702 AC078788.1-201ENST00000498457 634 ntTSL 3 BASIC7.86□□□□□ -1.15
RXRBP28702 HPRT1P1-201ENST00000509498 657 ntBASIC7.86□□□□□ -1.15
RXRBP28702 MTCO2P32-201ENST00000514865 403 ntBASIC7.86□□□□□ -1.15
RXRBP28702 AC010476.1-201ENST00000519111 851 ntBASIC7.86□□□□□ -1.15
RXRBP28702 LINC00534-203ENST00000523406 812 ntTSL 3 BASIC7.86□□□□□ -1.15
RXRBP28702 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC7.86□□□□□ -1.15
RXRBP28702 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC7.86□□□□□ -1.15
RXRBP28702 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
RXRBP28702 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC7.86□□□□□ -1.15
RXRBP28702 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC7.86□□□□□ -1.15
RXRBP28702 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC7.86□□□□□ -1.15
RXRBP28702 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC7.86□□□□□ -1.15
RXRBP28702 AC023161.2-201ENST00000551218 780 ntBASIC7.86□□□□□ -1.15
RXRBP28702 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC7.86□□□□□ -1.15
RXRBP28702 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC7.86□□□□□ -1.15
RXRBP28702 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC7.86□□□□□ -1.15
RXRBP28702 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC7.86□□□□□ -1.15
RXRBP28702 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC7.86□□□□□ -1.15
RXRBP28702 AC084036.1-201ENST00000609190 508 ntBASIC7.86□□□□□ -1.15
RXRBP28702 AC092106.3-201ENST00000611308 722 ntBASIC7.86□□□□□ -1.15
RXRBP28702 AL450226.2-201ENST00000622913 439 ntBASIC7.86□□□□□ -1.15
RXRBP28702 AP002505.2-201ENST00000623585 696 ntBASIC7.86□□□□□ -1.15
RXRBP28702 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC7.86□□□□□ -1.15
RXRBP28702 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC7.86□□□□□ -1.15
RXRBP28702 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC7.86□□□□□ -1.15
RXRBP28702 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC7.86□□□□□ -1.15
RXRBP28702 CUBNP3-201ENST00000457461 1784 ntBASIC7.86□□□□□ -1.15
RXRBP28702 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
RXRBP28702 PCDH11Y-204ENST00000400457 9039 ntAPPRIS P5 TSL 1 (best) BASIC7.86□□□□□ -1.15
RXRBP28702 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC7.86□□□□□ -1.15
RXRBP28702 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
RXRBP28702 DLG2-209ENST00000418306 3027 ntTSL 2 BASIC7.86□□□□□ -1.15
RXRBP28702 ZNF271P-201ENST00000399070 5124 ntTSL 2 BASIC7.86□□□□□ -1.15
RXRBP28702 LINC02092-201ENST00000455366 2472 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
RXRBP28702 NEDD9-208ENST00000504387 3211 ntAPPRIS ALT2 TSL 2 BASIC7.86□□□□□ -1.15
RXRBP28702 ZNF780A-203ENST00000450241 7500 ntTSL 2 BASIC7.86□□□□□ -1.15
RXRBP28702 NCOR1-205ENST00000395857 9501 ntTSL 5 BASIC7.85□□□□□ -1.15
RXRBP28702 OR6J1-201ENST00000540461 4165 ntAPPRIS P1 BASIC7.85□□□□□ -1.15
RXRBP28702 TOGARAM2-201ENST00000379558 12691 ntAPPRIS P1 TSL 5 BASIC7.85□□□□□ -1.15
RXRBP28702 PSMC6-218ENST00000606149 1560 ntAPPRIS ALT1 TSL 1 (best) BASIC7.85□□□□□ -1.15
RXRBP28702 CPSF6-202ENST00000435070 6616 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
RXRBP28702 MEF2C-210ENST00000506554 3469 ntTSL 5 BASIC7.85□□□□□ -1.15
RXRBP28702 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
RXRBP28702 AC005839.1-201ENST00000624148 3213 ntBASIC7.85□□□□□ -1.15
RXRBP28702 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC7.85□□□□□ -1.15
RXRBP28702 RNU1-77P-201ENST00000390868 162 ntBASIC7.85□□□□□ -1.15
RXRBP28702 AL360271.1-201ENST00000395679 510 ntBASIC7.85□□□□□ -1.15
RXRBP28702 UBE2V1P10-201ENST00000414685 269 ntBASIC7.85□□□□□ -1.15
RXRBP28702 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC7.85□□□□□ -1.15
RXRBP28702 AJ239321.1-201ENST00000424255 564 ntBASIC7.85□□□□□ -1.15
RXRBP28702 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC7.85□□□□□ -1.15
RXRBP28702 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
RXRBP28702 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC7.85□□□□□ -1.15
RXRBP28702 MTCO3P7-201ENST00000510008 774 ntBASIC7.85□□□□□ -1.15
RXRBP28702 AC103833.1-201ENST00000517442 172 ntBASIC7.85□□□□□ -1.15
RXRBP28702 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC7.85□□□□□ -1.15
RXRBP28702 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC7.85□□□□□ -1.15
RXRBP28702 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC7.85□□□□□ -1.15
RXRBP28702 PCNPP1-201ENST00000552501 511 ntBASIC7.85□□□□□ -1.15
RXRBP28702 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC7.85□□□□□ -1.15
RXRBP28702 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC7.85□□□□□ -1.15
RXRBP28702 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC7.85□□□□□ -1.15
RXRBP28702 UBA2-208ENST00000592791 910 ntTSL 2 BASIC7.85□□□□□ -1.15
RXRBP28702 AC026741.1-201ENST00000605892 482 ntBASIC7.85□□□□□ -1.15
RXRBP28702 AC017083.3-201ENST00000609955 700 ntBASIC7.85□□□□□ -1.15
RXRBP28702 AC116165.2-201ENST00000616705 206 ntBASIC7.85□□□□□ -1.15
RXRBP28702 AC003992.1-201ENST00000635364 557 ntBASIC7.85□□□□□ -1.15
RXRBP28702 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC7.85□□□□□ -1.15
RXRBP28702 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC7.85□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 167.7 ms