Protein–RNA interactions for Protein: P28067

HLA-DMA, HLA class II histocompatibility antigen, DM alpha chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMAP28067 E2F6P2-201ENST00000420708 748 ntBASIC4.59□□□□□ -1.67
HLA-DMAP28067 MIPEPP2-201ENST00000422560 1819 ntBASIC4.59□□□□□ -1.67
HLA-DMAP28067 AC006335.2-201ENST00000437993 330 ntBASIC4.59□□□□□ -1.67
HLA-DMAP28067 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
HLA-DMAP28067 ATP5LP2-201ENST00000440646 311 ntBASIC4.59□□□□□ -1.67
HLA-DMAP28067 UBQLN1P1-207ENST00000441056 1169 ntBASIC4.59□□□□□ -1.67
HLA-DMAP28067 RBMY2AP-201ENST00000445405 1157 ntBASIC4.59□□□□□ -1.67
HLA-DMAP28067 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC4.59□□□□□ -1.67
HLA-DMAP28067 RBMY2CP-201ENST00000448575 1157 ntBASIC4.59□□□□□ -1.67
HLA-DMAP28067 RBMY2DP-202ENST00000448881 1157 ntBASIC4.59□□□□□ -1.67
HLA-DMAP28067 RBMY2BP-202ENST00000451071 1156 ntBASIC4.59□□□□□ -1.67
HLA-DMAP28067 KARSP1-201ENST00000451871 1752 ntBASIC4.59□□□□□ -1.67
HLA-DMAP28067 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC4.59□□□□□ -1.67
HLA-DMAP28067 AL645937.3-201ENST00000453647 936 ntBASIC4.59□□□□□ -1.67
HLA-DMAP28067 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC4.59□□□□□ -1.67
HLA-DMAP28067 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC4.59□□□□□ -1.67
HLA-DMAP28067 RPL5P16-201ENST00000471467 790 ntBASIC4.59□□□□□ -1.67
HLA-DMAP28067 RPL21P6-201ENST00000479171 504 ntBASIC4.59□□□□□ -1.67
HLA-DMAP28067 AC093827.1-201ENST00000480094 861 ntBASIC4.59□□□□□ -1.67
HLA-DMAP28067 AC022133.1-201ENST00000490961 571 ntBASIC4.59□□□□□ -1.67
HLA-DMAP28067 RPL9P15-201ENST00000491096 532 ntBASIC4.59□□□□□ -1.67
HLA-DMAP28067 AC073073.1-201ENST00000493920 463 ntBASIC4.59□□□□□ -1.67
HLA-DMAP28067 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC4.59□□□□□ -1.67
HLA-DMAP28067 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC4.59□□□□□ -1.67
HLA-DMAP28067 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC4.59□□□□□ -1.67
HLA-DMAP28067 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC4.59□□□□□ -1.67
HLA-DMAP28067 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC4.59□□□□□ -1.67
HLA-DMAP28067 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.59□□□□□ -1.67
HLA-DMAP28067 ATP5G2-205ENST00000549748 728 ntTSL 2 BASIC4.59□□□□□ -1.67
HLA-DMAP28067 LINC02259-202ENST00000565543 438 ntTSL 2 BASIC4.59□□□□□ -1.67
HLA-DMAP28067 MT1CP-201ENST00000567054 174 ntBASIC4.59□□□□□ -1.67
HLA-DMAP28067 RN7SL176P-201ENST00000580352 264 ntBASIC4.59□□□□□ -1.67
HLA-DMAP28067 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC4.59□□□□□ -1.67
HLA-DMAP28067 AC018695.5-201ENST00000605872 315 ntBASIC4.59□□□□□ -1.67
HLA-DMAP28067 AL512413.1-201ENST00000606489 382 ntBASIC4.59□□□□□ -1.67
HLA-DMAP28067 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
HLA-DMAP28067 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC4.59□□□□□ -1.67
HLA-DMAP28067 MIR6793-201ENST00000612376 63 ntBASIC4.59□□□□□ -1.67
HLA-DMAP28067 MIR6883-201ENST00000614952 78 ntBASIC4.59□□□□□ -1.67
HLA-DMAP28067 AL356752.1-201ENST00000615844 593 ntBASIC4.59□□□□□ -1.67
HLA-DMAP28067 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC4.59□□□□□ -1.67
HLA-DMAP28067 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.59□□□□□ -1.68
HLA-DMAP28067 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
HLA-DMAP28067 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.59□□□□□ -1.68
HLA-DMAP28067 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC4.59□□□□□ -1.68
HLA-DMAP28067 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.59□□□□□ -1.68
HLA-DMAP28067 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
HLA-DMAP28067 AC005332.5-201ENST00000591222 2919 ntBASIC4.58□□□□□ -1.68
HLA-DMAP28067 AC093225.1-201ENST00000506867 1408 ntBASIC4.58□□□□□ -1.68
HLA-DMAP28067 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC4.58□□□□□ -1.68
HLA-DMAP28067 MGP-201ENST00000228938 694 ntTSL 3 BASIC4.58□□□□□ -1.68
HLA-DMAP28067 OCM2-201ENST00000257627 696 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
HLA-DMAP28067 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC4.58□□□□□ -1.68
HLA-DMAP28067 IL6STP1-201ENST00000346911 1020 ntBASIC4.58□□□□□ -1.68
HLA-DMAP28067 RNU1-94P-201ENST00000362627 173 ntBASIC4.58□□□□□ -1.68
HLA-DMAP28067 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC4.58□□□□□ -1.68
HLA-DMAP28067 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC4.58□□□□□ -1.68
HLA-DMAP28067 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
HLA-DMAP28067 SNORA68.2-201ENST00000391263 128 ntBASIC4.58□□□□□ -1.68
HLA-DMAP28067 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC4.58□□□□□ -1.68
HLA-DMAP28067 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
HLA-DMAP28067 NFU1P1-201ENST00000413128 774 ntBASIC4.58□□□□□ -1.68
HLA-DMAP28067 MTND4LP21-201ENST00000415303 295 ntBASIC4.58□□□□□ -1.68
HLA-DMAP28067 BX284632.2-201ENST00000421091 399 ntBASIC4.58□□□□□ -1.68
HLA-DMAP28067 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC4.58□□□□□ -1.68
HLA-DMAP28067 FABP7P2-201ENST00000429946 379 ntBASIC4.58□□□□□ -1.68
HLA-DMAP28067 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC4.58□□□□□ -1.68
HLA-DMAP28067 RPSAP32-201ENST00000432681 526 ntBASIC4.58□□□□□ -1.68
HLA-DMAP28067 HMGB3P10-201ENST00000434734 572 ntBASIC4.58□□□□□ -1.68
HLA-DMAP28067 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC4.58□□□□□ -1.68
HLA-DMAP28067 AL512605.1-202ENST00000441919 381 ntBASIC4.58□□□□□ -1.68
HLA-DMAP28067 RPL5P7-201ENST00000444235 813 ntBASIC4.58□□□□□ -1.68
HLA-DMAP28067 AL359955.2-201ENST00000445380 353 ntBASIC4.58□□□□□ -1.68
HLA-DMAP28067 AC004890.1-201ENST00000461005 181 ntBASIC4.58□□□□□ -1.68
HLA-DMAP28067 AP002884.1-201ENST00000479691 655 ntBASIC4.58□□□□□ -1.68
HLA-DMAP28067 RN7SL362P-201ENST00000494228 267 ntBASIC4.58□□□□□ -1.68
HLA-DMAP28067 GUSBP9-201ENST00000510138 584 ntBASIC4.58□□□□□ -1.68
HLA-DMAP28067 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.58□□□□□ -1.68
HLA-DMAP28067 NR1I3-229ENST00000511748 480 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
HLA-DMAP28067 SCARNA18.1-201ENST00000516330 83 ntBASIC4.58□□□□□ -1.68
HLA-DMAP28067 LINC02237-201ENST00000521753 805 ntTSL 3 BASIC4.58□□□□□ -1.68
HLA-DMAP28067 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC4.58□□□□□ -1.68
HLA-DMAP28067 AC024940.3-201ENST00000538551 316 ntBASIC4.58□□□□□ -1.68
HLA-DMAP28067 AL355838.1-201ENST00000554814 559 ntTSL 4 BASIC4.58□□□□□ -1.68
HLA-DMAP28067 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC4.58□□□□□ -1.68
HLA-DMAP28067 CD24P2-201ENST00000565486 219 ntBASIC4.58□□□□□ -1.68
HLA-DMAP28067 AC090283.1-201ENST00000582101 265 ntTSL 3 BASIC4.58□□□□□ -1.68
HLA-DMAP28067 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC4.58□□□□□ -1.68
HLA-DMAP28067 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC4.58□□□□□ -1.68
HLA-DMAP28067 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC4.58□□□□□ -1.68
HLA-DMAP28067 XIST-210ENST00000602863 775 ntTSL 3 BASIC4.58□□□□□ -1.68
HLA-DMAP28067 AL159169.2-201ENST00000610061 1269 ntBASIC4.58□□□□□ -1.68
HLA-DMAP28067 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC4.58□□□□□ -1.68
HLA-DMAP28067 AC011346.1-204ENST00000638089 1210 ntAPPRIS P5 TSL 3 BASIC4.58□□□□□ -1.68
HLA-DMAP28067 5S_rRNA.29-201ENST00000641250 107 ntBASIC4.58□□□□□ -1.68
HLA-DMAP28067 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC4.58□□□□□ -1.68
HLA-DMAP28067 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
HLA-DMAP28067 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
HLA-DMAP28067 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
HLA-DMAP28067 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 144.2 ms