Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 AL133482.1-201ENST00000415988 498 ntBASIC5.55□□□□□ -1.52
HLA-DPA1P20036 AC007064.3-201ENST00000422608 359 ntBASIC5.55□□□□□ -1.52
HLA-DPA1P20036 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC5.55□□□□□ -1.52
HLA-DPA1P20036 NDUFB4P8-201ENST00000435351 367 ntBASIC5.55□□□□□ -1.52
HLA-DPA1P20036 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC5.55□□□□□ -1.52
HLA-DPA1P20036 AL359265.1-201ENST00000440296 795 ntBASIC5.55□□□□□ -1.52
HLA-DPA1P20036 AC009963.4-201ENST00000448535 339 ntBASIC5.55□□□□□ -1.52
HLA-DPA1P20036 CCRL1P1-201ENST00000449542 1053 ntBASIC5.55□□□□□ -1.52
HLA-DPA1P20036 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC5.55□□□□□ -1.52
HLA-DPA1P20036 HNRNPDLP3-201ENST00000456745 380 ntBASIC5.55□□□□□ -1.52
HLA-DPA1P20036 RN7SL717P-201ENST00000478343 297 ntBASIC5.55□□□□□ -1.52
HLA-DPA1P20036 LARP7P4-201ENST00000481075 878 ntBASIC5.55□□□□□ -1.52
HLA-DPA1P20036 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC5.55□□□□□ -1.52
HLA-DPA1P20036 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC5.55□□□□□ -1.52
HLA-DPA1P20036 AC106872.4-201ENST00000510050 523 ntBASIC5.55□□□□□ -1.52
HLA-DPA1P20036 AC091912.1-201ENST00000511351 248 ntBASIC5.55□□□□□ -1.52
HLA-DPA1P20036 TMEM97P2-201ENST00000517841 403 ntBASIC5.55□□□□□ -1.52
HLA-DPA1P20036 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC5.55□□□□□ -1.52
HLA-DPA1P20036 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC5.55□□□□□ -1.52
HLA-DPA1P20036 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC5.55□□□□□ -1.52
HLA-DPA1P20036 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.55□□□□□ -1.52
HLA-DPA1P20036 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC5.55□□□□□ -1.52
HLA-DPA1P20036 RNA5SP440-201ENST00000612665 119 ntBASIC5.55□□□□□ -1.52
HLA-DPA1P20036 AL391597.1-201ENST00000618707 694 ntBASIC5.55□□□□□ -1.52
HLA-DPA1P20036 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC5.55□□□□□ -1.52
HLA-DPA1P20036 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC5.55□□□□□ -1.52
HLA-DPA1P20036 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC5.55□□□□□ -1.52
HLA-DPA1P20036 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
HLA-DPA1P20036 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
HLA-DPA1P20036 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
HLA-DPA1P20036 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
HLA-DPA1P20036 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
HLA-DPA1P20036 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.55□□□□□ -1.52
HLA-DPA1P20036 AC087565.3-202ENST00000642085 1603 ntBASIC5.55□□□□□ -1.52
HLA-DPA1P20036 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
HLA-DPA1P20036 AC003973.3-201ENST00000624863 2822 ntBASIC5.55□□□□□ -1.52
HLA-DPA1P20036 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.55□□□□□ -1.52
HLA-DPA1P20036 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.55□□□□□ -1.52
HLA-DPA1P20036 CASC19-281ENST00000642118 1554 ntBASIC5.55□□□□□ -1.52
HLA-DPA1P20036 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
HLA-DPA1P20036 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
HLA-DPA1P20036 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
HLA-DPA1P20036 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC5.54□□□□□ -1.52
HLA-DPA1P20036 ALB-202ENST00000401494 1659 ntTSL 5 BASIC5.54□□□□□ -1.52
HLA-DPA1P20036 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.54□□□□□ -1.52
HLA-DPA1P20036 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
HLA-DPA1P20036 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
HLA-DPA1P20036 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
HLA-DPA1P20036 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
HLA-DPA1P20036 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
HLA-DPA1P20036 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
HLA-DPA1P20036 RNU4-23P-201ENST00000362839 140 ntBASIC5.54□□□□□ -1.52
HLA-DPA1P20036 RN7SKP145-201ENST00000363291 303 ntBASIC5.54□□□□□ -1.52
HLA-DPA1P20036 AL512422.1-201ENST00000407033 553 ntBASIC5.54□□□□□ -1.52
HLA-DPA1P20036 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC5.54□□□□□ -1.52
HLA-DPA1P20036 AC005008.2-201ENST00000431501 715 ntTSL 3 BASIC5.54□□□□□ -1.52
HLA-DPA1P20036 NPM1P18-201ENST00000434232 732 ntBASIC5.54□□□□□ -1.52
HLA-DPA1P20036 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC5.54□□□□□ -1.52
HLA-DPA1P20036 AC037198.2-201ENST00000478845 733 ntBASIC5.54□□□□□ -1.52
HLA-DPA1P20036 RN7SL101P-201ENST00000496350 279 ntBASIC5.54□□□□□ -1.52
HLA-DPA1P20036 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC5.54□□□□□ -1.52
HLA-DPA1P20036 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC5.54□□□□□ -1.52
HLA-DPA1P20036 AC074087.1-201ENST00000512059 724 ntBASIC5.54□□□□□ -1.52
HLA-DPA1P20036 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC5.54□□□□□ -1.52
HLA-DPA1P20036 AC079064.1-201ENST00000528365 362 ntBASIC5.54□□□□□ -1.52
HLA-DPA1P20036 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC5.54□□□□□ -1.52
HLA-DPA1P20036 AC022404.1-201ENST00000555320 273 ntBASIC5.54□□□□□ -1.52
HLA-DPA1P20036 AC020978.7-201ENST00000575953 1187 ntBASIC5.54□□□□□ -1.52
HLA-DPA1P20036 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC5.54□□□□□ -1.52
HLA-DPA1P20036 MIR7853-201ENST00000584820 132 ntBASIC5.54□□□□□ -1.52
HLA-DPA1P20036 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC5.54□□□□□ -1.52
HLA-DPA1P20036 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC5.54□□□□□ -1.52
HLA-DPA1P20036 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC5.54□□□□□ -1.52
HLA-DPA1P20036 XIST-210ENST00000602863 775 ntTSL 3 BASIC5.54□□□□□ -1.52
HLA-DPA1P20036 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC5.54□□□□□ -1.52
HLA-DPA1P20036 AC004477.3-201ENST00000614061 590 ntBASIC5.54□□□□□ -1.52
HLA-DPA1P20036 AL118522.2-201ENST00000616045 615 ntBASIC5.54□□□□□ -1.52
HLA-DPA1P20036 AL356274.1-201ENST00000617064 410 ntBASIC5.54□□□□□ -1.52
HLA-DPA1P20036 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC5.54□□□□□ -1.52
HLA-DPA1P20036 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
HLA-DPA1P20036 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
HLA-DPA1P20036 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
HLA-DPA1P20036 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
HLA-DPA1P20036 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
HLA-DPA1P20036 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
HLA-DPA1P20036 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
HLA-DPA1P20036 SAMMSON-213ENST00000641336 1521 ntBASIC5.53□□□□□ -1.52
HLA-DPA1P20036 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
HLA-DPA1P20036 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.53□□□□□ -1.52
HLA-DPA1P20036 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
HLA-DPA1P20036 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
HLA-DPA1P20036 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
HLA-DPA1P20036 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
HLA-DPA1P20036 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.53□□□□□ -1.52
HLA-DPA1P20036 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC5.53□□□□□ -1.52
HLA-DPA1P20036 RNA5SP242-201ENST00000364171 118 ntBASIC5.53□□□□□ -1.52
HLA-DPA1P20036 SNORA70.6-201ENST00000383934 134 ntBASIC5.53□□□□□ -1.52
HLA-DPA1P20036 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
HLA-DPA1P20036 RPL10P10-201ENST00000403509 664 ntBASIC5.53□□□□□ -1.52
HLA-DPA1P20036 RN7SKP206-201ENST00000410823 293 ntBASIC5.53□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 125.9 ms