Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 AC106730.2-201ENST00000566641 540 ntBASIC5.35□□□□□ -1.55
XRCC1P18887 AC009852.2-201ENST00000567898 485 ntBASIC5.35□□□□□ -1.55
XRCC1P18887 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC5.35□□□□□ -1.55
XRCC1P18887 AC060766.1-201ENST00000590824 627 ntBASIC5.35□□□□□ -1.55
XRCC1P18887 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC5.35□□□□□ -1.55
XRCC1P18887 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.35□□□□□ -1.55
XRCC1P18887 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC5.35□□□□□ -1.55
XRCC1P18887 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.35□□□□□ -1.55
XRCC1P18887 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC5.35□□□□□ -1.55
XRCC1P18887 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC5.35□□□□□ -1.55
XRCC1P18887 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
XRCC1P18887 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC5.35□□□□□ -1.55
XRCC1P18887 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.35□□□□□ -1.55
XRCC1P18887 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
XRCC1P18887 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.35□□□□□ -1.55
XRCC1P18887 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
XRCC1P18887 AC093849.1-201ENST00000563631 2209 ntBASIC5.35□□□□□ -1.55
XRCC1P18887 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
XRCC1P18887 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
XRCC1P18887 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
XRCC1P18887 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
XRCC1P18887 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
XRCC1P18887 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.34□□□□□ -1.55
XRCC1P18887 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
XRCC1P18887 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
XRCC1P18887 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
XRCC1P18887 RNA5SP335-201ENST00000363817 110 ntBASIC5.34□□□□□ -1.55
XRCC1P18887 AL390774.1-201ENST00000411924 246 ntBASIC5.34□□□□□ -1.55
XRCC1P18887 AP000534.2-201ENST00000412729 568 ntBASIC5.34□□□□□ -1.55
XRCC1P18887 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC5.34□□□□□ -1.55
XRCC1P18887 AC087380.1-202ENST00000415970 1163 ntTSL 2 BASIC5.34□□□□□ -1.55
XRCC1P18887 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC5.34□□□□□ -1.55
XRCC1P18887 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC5.34□□□□□ -1.55
XRCC1P18887 NPM1P19-201ENST00000450070 712 ntBASIC5.34□□□□□ -1.55
XRCC1P18887 AZGP1P2-201ENST00000454506 345 ntBASIC5.34□□□□□ -1.55
XRCC1P18887 RN7SL447P-201ENST00000494711 245 ntBASIC5.34□□□□□ -1.55
XRCC1P18887 ENPP7P11-201ENST00000505915 627 ntBASIC5.34□□□□□ -1.55
XRCC1P18887 HMGB1P44-201ENST00000508597 572 ntBASIC5.34□□□□□ -1.55
XRCC1P18887 AC021106.1-201ENST00000509020 1058 ntBASIC5.34□□□□□ -1.55
XRCC1P18887 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC5.34□□□□□ -1.55
XRCC1P18887 AC091912.1-201ENST00000511351 248 ntBASIC5.34□□□□□ -1.55
XRCC1P18887 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC5.34□□□□□ -1.55
XRCC1P18887 RNA5SP34-201ENST00000516887 130 ntBASIC5.34□□□□□ -1.55
XRCC1P18887 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC5.34□□□□□ -1.55
XRCC1P18887 AL049779.2-201ENST00000553847 315 ntBASIC5.34□□□□□ -1.55
XRCC1P18887 NMNAT1P5-201ENST00000559657 841 ntBASIC5.34□□□□□ -1.55
XRCC1P18887 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
XRCC1P18887 AC115989.2-201ENST00000578640 563 ntBASIC5.34□□□□□ -1.55
XRCC1P18887 MIR1269B-201ENST00000580405 75 ntBASIC5.34□□□□□ -1.55
XRCC1P18887 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC5.34□□□□□ -1.55
XRCC1P18887 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
XRCC1P18887 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC5.34□□□□□ -1.55
XRCC1P18887 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
XRCC1P18887 AP003400.2-201ENST00000624036 666 ntBASIC5.34□□□□□ -1.55
XRCC1P18887 AC136428.4-201ENST00000634254 1155 ntBASIC5.34□□□□□ -1.55
XRCC1P18887 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC5.34□□□□□ -1.55
XRCC1P18887 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
XRCC1P18887 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
XRCC1P18887 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.34□□□□□ -1.55
XRCC1P18887 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
XRCC1P18887 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.34□□□□□ -1.55
XRCC1P18887 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
XRCC1P18887 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
XRCC1P18887 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
XRCC1P18887 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
XRCC1P18887 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.34□□□□□ -1.56
XRCC1P18887 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
XRCC1P18887 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
XRCC1P18887 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
XRCC1P18887 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC5.33□□□□□ -1.56
XRCC1P18887 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
XRCC1P18887 AC235565.1-201ENST00000456962 1325 ntBASIC5.33□□□□□ -1.56
XRCC1P18887 AC100757.1-201ENST00000616872 1835 ntBASIC5.33□□□□□ -1.56
XRCC1P18887 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
XRCC1P18887 OR9K1P-201ENST00000326513 941 ntBASIC5.33□□□□□ -1.56
XRCC1P18887 RNU1-77P-201ENST00000390868 162 ntBASIC5.33□□□□□ -1.56
XRCC1P18887 PPIAP9-201ENST00000403866 498 ntBASIC5.33□□□□□ -1.56
XRCC1P18887 AC013268.2-201ENST00000420753 337 ntBASIC5.33□□□□□ -1.56
XRCC1P18887 AL133325.1-201ENST00000421090 382 ntBASIC5.33□□□□□ -1.56
XRCC1P18887 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.33□□□□□ -1.56
XRCC1P18887 SRSF1P1-201ENST00000424058 520 ntBASIC5.33□□□□□ -1.56
XRCC1P18887 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC5.33□□□□□ -1.56
XRCC1P18887 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC5.33□□□□□ -1.56
XRCC1P18887 PRUNEP1-201ENST00000425846 705 ntBASIC5.33□□□□□ -1.56
XRCC1P18887 CYCSP6-201ENST00000434498 302 ntBASIC5.33□□□□□ -1.56
XRCC1P18887 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC5.33□□□□□ -1.56
XRCC1P18887 RPL12P18-201ENST00000437175 325 ntBASIC5.33□□□□□ -1.56
XRCC1P18887 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC5.33□□□□□ -1.56
XRCC1P18887 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC5.33□□□□□ -1.56
XRCC1P18887 RN7SL188P-201ENST00000469842 285 ntBASIC5.33□□□□□ -1.56
XRCC1P18887 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC5.33□□□□□ -1.56
XRCC1P18887 RPS21P4-201ENST00000487122 248 ntBASIC5.33□□□□□ -1.56
XRCC1P18887 RN7SL30P-201ENST00000488416 306 ntBASIC5.33□□□□□ -1.56
XRCC1P18887 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC5.33□□□□□ -1.56
XRCC1P18887 AC008638.1-201ENST00000506035 866 ntBASIC5.33□□□□□ -1.56
XRCC1P18887 PGAM1P13-201ENST00000507497 754 ntBASIC5.33□□□□□ -1.56
XRCC1P18887 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC5.33□□□□□ -1.56
XRCC1P18887 SCARNA16.4-201ENST00000516956 187 ntBASIC5.33□□□□□ -1.56
XRCC1P18887 RN7SKP5-201ENST00000517045 272 ntBASIC5.33□□□□□ -1.56
XRCC1P18887 IGLV2-28-201ENST00000520681 304 ntBASIC5.33□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 221.6 ms