Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC5.54□□□□□ -1.52
PCNAP12004 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC5.54□□□□□ -1.52
PCNAP12004 AC093770.1-201ENST00000511559 571 ntBASIC5.54□□□□□ -1.52
PCNAP12004 AL671862.1-201ENST00000515851 349 ntBASIC5.54□□□□□ -1.52
PCNAP12004 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC5.54□□□□□ -1.52
PCNAP12004 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC5.54□□□□□ -1.52
PCNAP12004 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
PCNAP12004 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC5.54□□□□□ -1.52
PCNAP12004 AL356801.1-201ENST00000559320 294 ntBASIC5.54□□□□□ -1.52
PCNAP12004 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC5.54□□□□□ -1.52
PCNAP12004 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC5.54□□□□□ -1.52
PCNAP12004 ZNF322P1-201ENST00000568013 1209 ntBASIC5.54□□□□□ -1.52
PCNAP12004 AC027216.1-201ENST00000577726 685 ntBASIC5.54□□□□□ -1.52
PCNAP12004 MIR4260-201ENST00000583107 67 ntBASIC5.54□□□□□ -1.52
PCNAP12004 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC5.54□□□□□ -1.52
PCNAP12004 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC5.54□□□□□ -1.52
PCNAP12004 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC5.54□□□□□ -1.52
PCNAP12004 BNIP3P35-201ENST00000604530 490 ntBASIC5.54□□□□□ -1.52
PCNAP12004 AL139022.2-201ENST00000606934 443 ntBASIC5.54□□□□□ -1.52
PCNAP12004 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC5.54□□□□□ -1.52
PCNAP12004 Six3os1_2.1-201ENST00000616963 217 ntBASIC5.54□□□□□ -1.52
PCNAP12004 AL133370.2-201ENST00000619934 439 ntBASIC5.54□□□□□ -1.52
PCNAP12004 AC022400.9-201ENST00000623633 273 ntBASIC5.54□□□□□ -1.52
PCNAP12004 AC129778.1-202ENST00000623812 261 ntBASIC5.54□□□□□ -1.52
PCNAP12004 AC019080.5-201ENST00000624891 757 ntBASIC5.54□□□□□ -1.52
PCNAP12004 AL591379.1-207ENST00000635982 261 ntBASIC5.54□□□□□ -1.52
PCNAP12004 AMYH02020865.1-205ENST00000636189 261 ntBASIC5.54□□□□□ -1.52
PCNAP12004 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
PCNAP12004 AL158152.1-201ENST00000602652 1435 ntBASIC5.54□□□□□ -1.52
PCNAP12004 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
PCNAP12004 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
PCNAP12004 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
PCNAP12004 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC5.54□□□□□ -1.52
PCNAP12004 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.54□□□□□ -1.52
PCNAP12004 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.54□□□□□ -1.52
PCNAP12004 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
PCNAP12004 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
PCNAP12004 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
PCNAP12004 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
PCNAP12004 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC5.53□□□□□ -1.52
PCNAP12004 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.53□□□□□ -1.52
PCNAP12004 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
PCNAP12004 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC5.53□□□□□ -1.52
PCNAP12004 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC5.53□□□□□ -1.52
PCNAP12004 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
PCNAP12004 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
PCNAP12004 RN7SKP69-201ENST00000365390 305 ntBASIC5.53□□□□□ -1.52
PCNAP12004 GCNT6-201ENST00000379591 934 ntBASIC5.53□□□□□ -1.52
PCNAP12004 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
PCNAP12004 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC5.53□□□□□ -1.52
PCNAP12004 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC5.53□□□□□ -1.52
PCNAP12004 AL606490.7-201ENST00000433136 191 ntBASIC5.53□□□□□ -1.52
PCNAP12004 AC242426.1-201ENST00000435270 960 ntBASIC5.53□□□□□ -1.52
PCNAP12004 MTND2P40-201ENST00000436718 841 ntBASIC5.53□□□□□ -1.52
PCNAP12004 AC245517.2-201ENST00000442890 346 ntBASIC5.53□□□□□ -1.52
PCNAP12004 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC5.53□□□□□ -1.52
PCNAP12004 GAS5-218ENST00000448718 565 ntTSL 2 BASIC5.53□□□□□ -1.52
PCNAP12004 AL591623.2-201ENST00000449978 222 ntBASIC5.53□□□□□ -1.52
PCNAP12004 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC5.53□□□□□ -1.52
PCNAP12004 RPS23P2-201ENST00000463671 415 ntBASIC5.53□□□□□ -1.52
PCNAP12004 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
PCNAP12004 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC5.53□□□□□ -1.52
PCNAP12004 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
PCNAP12004 RPL23AP73-201ENST00000492507 471 ntBASIC5.53□□□□□ -1.52
PCNAP12004 OR9N1P-202ENST00000494289 481 ntBASIC5.53□□□□□ -1.52
PCNAP12004 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC5.53□□□□□ -1.52
PCNAP12004 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC5.53□□□□□ -1.52
PCNAP12004 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC5.53□□□□□ -1.52
PCNAP12004 AC016550.3-201ENST00000515706 767 ntBASIC5.53□□□□□ -1.52
PCNAP12004 AC139365.2-201ENST00000517972 253 ntBASIC5.53□□□□□ -1.52
PCNAP12004 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC5.53□□□□□ -1.52
PCNAP12004 MTND5P21-201ENST00000531961 522 ntBASIC5.53□□□□□ -1.52
PCNAP12004 AC024405.1-201ENST00000532521 1042 ntBASIC5.53□□□□□ -1.52
PCNAP12004 OR4A43P-201ENST00000532938 908 ntBASIC5.53□□□□□ -1.52
PCNAP12004 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC5.53□□□□□ -1.52
PCNAP12004 AC068305.2-201ENST00000550567 1205 ntBASIC5.53□□□□□ -1.52
PCNAP12004 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC5.53□□□□□ -1.52
PCNAP12004 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC5.53□□□□□ -1.52
PCNAP12004 DNAJC19P3-201ENST00000594491 331 ntBASIC5.53□□□□□ -1.52
PCNAP12004 ABI1P1-201ENST00000603375 1120 ntBASIC5.53□□□□□ -1.52
PCNAP12004 AC135178.6-201ENST00000605314 398 ntBASIC5.53□□□□□ -1.52
PCNAP12004 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC5.53□□□□□ -1.52
PCNAP12004 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC5.53□□□□□ -1.52
PCNAP12004 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
PCNAP12004 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
PCNAP12004 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.53□□□□□ -1.52
PCNAP12004 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
PCNAP12004 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC5.53□□□□□ -1.52
PCNAP12004 AL138820.1-201ENST00000617901 5305 ntBASIC5.53□□□□□ -1.52
PCNAP12004 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC5.52□□□□□ -1.53
PCNAP12004 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
PCNAP12004 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.52□□□□□ -1.53
PCNAP12004 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
PCNAP12004 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.52□□□□□ -1.53
PCNAP12004 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
PCNAP12004 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
PCNAP12004 RNA5SP500-201ENST00000364486 119 ntBASIC5.52□□□□□ -1.53
PCNAP12004 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
PCNAP12004 HIST1H3PS1-201ENST00000404612 417 ntBASIC5.52□□□□□ -1.53
PCNAP12004 Z86062.1-201ENST00000406773 777 ntBASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 87.6 ms