Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 OR2AH1P-201ENST00000425717 928 ntBASIC5.81□□□□□ -1.48
TPM1P09493 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC5.81□□□□□ -1.48
TPM1P09493 LRRC37A14P-201ENST00000452297 462 ntBASIC5.81□□□□□ -1.48
TPM1P09493 AC079168.1-201ENST00000458741 345 ntBASIC5.81□□□□□ -1.48
TPM1P09493 NIFKP7-201ENST00000503365 834 ntBASIC5.81□□□□□ -1.48
TPM1P09493 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC5.81□□□□□ -1.48
TPM1P09493 HMGB3P16-201ENST00000508037 287 ntBASIC5.81□□□□□ -1.48
TPM1P09493 RN7SKP46-201ENST00000515942 234 ntBASIC5.81□□□□□ -1.48
TPM1P09493 AC026826.3-201ENST00000561747 158 ntBASIC5.81□□□□□ -1.48
TPM1P09493 CNEP1R1-204ENST00000562576 656 ntTSL 5 BASIC5.81□□□□□ -1.48
TPM1P09493 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC5.81□□□□□ -1.48
TPM1P09493 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC5.81□□□□□ -1.48
TPM1P09493 HTR1DP1-201ENST00000616500 888 ntBASIC5.81□□□□□ -1.48
TPM1P09493 MIR6806-201ENST00000622141 64 ntBASIC5.81□□□□□ -1.48
TPM1P09493 AC015871.5-202ENST00000623252 701 ntBASIC5.81□□□□□ -1.48
TPM1P09493 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC5.81□□□□□ -1.48
TPM1P09493 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
TPM1P09493 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
TPM1P09493 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC5.81□□□□□ -1.48
TPM1P09493 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC5.81□□□□□ -1.48
TPM1P09493 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
TPM1P09493 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
TPM1P09493 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
TPM1P09493 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
TPM1P09493 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.8□□□□□ -1.48
TPM1P09493 AC090181.3-201ENST00000624777 1514 ntBASIC5.8□□□□□ -1.48
TPM1P09493 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
TPM1P09493 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
TPM1P09493 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
TPM1P09493 ODF3-202ENST00000342593 386 ntTSL 5 BASIC5.8□□□□□ -1.48
TPM1P09493 RN7SKP292-201ENST00000365522 317 ntBASIC5.8□□□□□ -1.48
TPM1P09493 AC004386.1-201ENST00000393214 761 ntBASIC5.8□□□□□ -1.48
TPM1P09493 RNU2-22P-201ENST00000411266 212 ntBASIC5.8□□□□□ -1.48
TPM1P09493 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC5.8□□□□□ -1.48
TPM1P09493 AC106900.1-201ENST00000418620 456 ntTSL 5 BASIC5.8□□□□□ -1.48
TPM1P09493 AC069154.1-201ENST00000432914 542 ntBASIC5.8□□□□□ -1.48
TPM1P09493 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC5.8□□□□□ -1.48
TPM1P09493 AC118758.1-202ENST00000454719 225 ntBASIC5.8□□□□□ -1.48
TPM1P09493 LDHBP2-201ENST00000456969 1005 ntBASIC5.8□□□□□ -1.48
TPM1P09493 AP000942.1-201ENST00000463969 747 ntBASIC5.8□□□□□ -1.48
TPM1P09493 RN7SL814P-201ENST00000487715 300 ntBASIC5.8□□□□□ -1.48
TPM1P09493 HMGB1P44-201ENST00000508597 572 ntBASIC5.8□□□□□ -1.48
TPM1P09493 AC109481.1-201ENST00000509173 282 ntBASIC5.8□□□□□ -1.48
TPM1P09493 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC5.8□□□□□ -1.48
TPM1P09493 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC5.8□□□□□ -1.48
TPM1P09493 AC006512.2-201ENST00000543250 486 ntBASIC5.8□□□□□ -1.48
TPM1P09493 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
TPM1P09493 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC5.8□□□□□ -1.48
TPM1P09493 CCDC58P1-201ENST00000578567 430 ntBASIC5.8□□□□□ -1.48
TPM1P09493 AC090227.1-201ENST00000590532 936 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
TPM1P09493 LINC01355-202ENST00000604481 400 ntTSL 2 BASIC5.8□□□□□ -1.48
TPM1P09493 AC005252.1-201ENST00000604518 1063 ntBASIC5.8□□□□□ -1.48
TPM1P09493 AC009597.2-201ENST00000604659 592 ntBASIC5.8□□□□□ -1.48
TPM1P09493 MIR6813-201ENST00000621638 56 ntBASIC5.8□□□□□ -1.48
TPM1P09493 AC015660.5-201ENST00000623238 564 ntBASIC5.8□□□□□ -1.48
TPM1P09493 5S_rRNA.28-201ENST00000638107 119 ntBASIC5.8□□□□□ -1.48
TPM1P09493 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
TPM1P09493 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
TPM1P09493 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
TPM1P09493 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC5.79□□□□□ -1.48
TPM1P09493 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC5.79□□□□□ -1.48
TPM1P09493 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC5.79□□□□□ -1.48
TPM1P09493 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
TPM1P09493 EEF1A1P21-201ENST00000512363 1344 ntBASIC5.79□□□□□ -1.48
TPM1P09493 AL020995.1-201ENST00000427524 1680 ntTSL 2 BASIC5.79□□□□□ -1.48
TPM1P09493 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
TPM1P09493 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
TPM1P09493 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC5.79□□□□□ -1.48
TPM1P09493 AC005294.1-201ENST00000355509 281 ntBASIC5.79□□□□□ -1.48
TPM1P09493 RNA5SP394-201ENST00000364216 119 ntBASIC5.79□□□□□ -1.48
TPM1P09493 AC002524.1-201ENST00000411687 547 ntBASIC5.79□□□□□ -1.48
TPM1P09493 OR2AT2P-201ENST00000413438 905 ntBASIC5.79□□□□□ -1.48
TPM1P09493 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC5.79□□□□□ -1.48
TPM1P09493 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC5.79□□□□□ -1.48
TPM1P09493 GSTM5P1-201ENST00000434751 660 ntBASIC5.79□□□□□ -1.48
TPM1P09493 AP006222.1-205ENST00000450734 457 ntBASIC5.79□□□□□ -1.48
TPM1P09493 BX842559.2-201ENST00000451418 605 ntBASIC5.79□□□□□ -1.48
TPM1P09493 AL359839.1-201ENST00000451975 1160 ntBASIC5.79□□□□□ -1.48
TPM1P09493 RN7SL189P-201ENST00000468631 289 ntBASIC5.79□□□□□ -1.48
TPM1P09493 AL671862.1-201ENST00000515851 349 ntBASIC5.79□□□□□ -1.48
TPM1P09493 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC5.79□□□□□ -1.48
TPM1P09493 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC5.79□□□□□ -1.48
TPM1P09493 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC5.79□□□□□ -1.48
TPM1P09493 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
TPM1P09493 AC079600.1-201ENST00000550326 297 ntBASIC5.79□□□□□ -1.48
TPM1P09493 AC068305.2-201ENST00000550567 1205 ntBASIC5.79□□□□□ -1.48
TPM1P09493 AC138207.8-204ENST00000579588 527 ntBASIC5.79□□□□□ -1.48
TPM1P09493 AC011840.5-201ENST00000582125 771 ntBASIC5.79□□□□□ -1.48
TPM1P09493 Metazoa_SRP.207-201ENST00000612254 285 ntBASIC5.79□□□□□ -1.48
TPM1P09493 AC037198.3-201ENST00000616754 526 ntBASIC5.79□□□□□ -1.48
TPM1P09493 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
TPM1P09493 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
TPM1P09493 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
TPM1P09493 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC5.79□□□□□ -1.48
TPM1P09493 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
TPM1P09493 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC5.78□□□□□ -1.48
TPM1P09493 SLC9B1P1-201ENST00000331172 1337 ntBASIC5.78□□□□□ -1.48
TPM1P09493 LCMT1-AS2-202ENST00000565214 5666 ntBASIC5.78□□□□□ -1.48
TPM1P09493 YES1P1-201ENST00000418510 1628 ntBASIC5.78□□□□□ -1.48
TPM1P09493 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC5.78□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 89.5 ms