Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 AC108161.1-201ENST00000461060 402 ntBASIC4.02□□□□□ -1.77
CXCL1P09341 KDELR2-206ENST00000490996 655 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CXCL1P09341 AC073073.1-201ENST00000493920 463 ntBASIC4.02□□□□□ -1.77
CXCL1P09341 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CXCL1P09341 IGKV3D-25-201ENST00000519599 235 ntBASIC4.02□□□□□ -1.77
CXCL1P09341 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC4.02□□□□□ -1.77
CXCL1P09341 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC4.02□□□□□ -1.77
CXCL1P09341 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC4.02□□□□□ -1.77
CXCL1P09341 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC4.02□□□□□ -1.77
CXCL1P09341 AC090774.2-201ENST00000584708 322 ntBASIC4.02□□□□□ -1.77
CXCL1P09341 AC091132.1-201ENST00000588189 547 ntTSL 5 BASIC4.02□□□□□ -1.77
CXCL1P09341 WBP1LP12-201ENST00000604449 331 ntBASIC4.02□□□□□ -1.77
CXCL1P09341 AC011626.1-201ENST00000604710 562 ntBASIC4.02□□□□□ -1.77
CXCL1P09341 AC026979.4-201ENST00000606555 645 ntBASIC4.02□□□□□ -1.77
CXCL1P09341 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.02□□□□□ -1.77
CXCL1P09341 MTCO1P46-201ENST00000451639 1491 ntBASIC4.02□□□□□ -1.77
CXCL1P09341 ELOC-205ENST00000520210 1451 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CXCL1P09341 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
CXCL1P09341 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
CXCL1P09341 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CXCL1P09341 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CXCL1P09341 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
CXCL1P09341 AL592182.3-201ENST00000642132 3304 ntBASIC4.01□□□□□ -1.77
CXCL1P09341 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
CXCL1P09341 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CXCL1P09341 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
CXCL1P09341 SSXP3-201ENST00000442971 1300 ntBASIC4.01□□□□□ -1.77
CXCL1P09341 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.01□□□□□ -1.77
CXCL1P09341 AC068254.2-201ENST00000623938 3577 ntBASIC4.01□□□□□ -1.77
CXCL1P09341 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CXCL1P09341 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CXCL1P09341 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CXCL1P09341 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CXCL1P09341 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.01□□□□□ -1.77
CXCL1P09341 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
CXCL1P09341 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
CXCL1P09341 OR7E25P-201ENST00000344844 931 ntBASIC4.01□□□□□ -1.77
CXCL1P09341 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
CXCL1P09341 SNORA64.1-201ENST00000362600 132 ntBASIC4.01□□□□□ -1.77
CXCL1P09341 DBIP1-201ENST00000401435 260 ntBASIC4.01□□□□□ -1.77
CXCL1P09341 AL592291.1-201ENST00000403830 352 ntBASIC4.01□□□□□ -1.77
CXCL1P09341 AP000580.1-201ENST00000404439 358 ntBASIC4.01□□□□□ -1.77
CXCL1P09341 AL121834.1-202ENST00000404494 277 ntBASIC4.01□□□□□ -1.77
CXCL1P09341 TMBIM7P-201ENST00000418074 855 ntBASIC4.01□□□□□ -1.77
CXCL1P09341 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC4.01□□□□□ -1.77
CXCL1P09341 GAPDHP59-201ENST00000435908 267 ntBASIC4.01□□□□□ -1.77
CXCL1P09341 PNKDP1-201ENST00000435914 430 ntBASIC4.01□□□□□ -1.77
CXCL1P09341 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC4.01□□□□□ -1.77
CXCL1P09341 PCNPP2-201ENST00000441651 455 ntBASIC4.01□□□□□ -1.77
CXCL1P09341 PA2G4P1-201ENST00000442248 1197 ntBASIC4.01□□□□□ -1.77
CXCL1P09341 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC4.01□□□□□ -1.77
CXCL1P09341 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC4.01□□□□□ -1.77
CXCL1P09341 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC4.01□□□□□ -1.77
CXCL1P09341 GYG1P1-201ENST00000460864 698 ntBASIC4.01□□□□□ -1.77
CXCL1P09341 FCRL2-205ENST00000469986 902 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CXCL1P09341 AC087672.1-201ENST00000479876 766 ntBASIC4.01□□□□□ -1.77
CXCL1P09341 RN7SL193P-201ENST00000491708 276 ntBASIC4.01□□□□□ -1.77
CXCL1P09341 SNRPCP11-201ENST00000492453 205 ntBASIC4.01□□□□□ -1.77
CXCL1P09341 STMN1P2-201ENST00000508435 439 ntBASIC4.01□□□□□ -1.77
CXCL1P09341 CENPK-211ENST00000510693 1040 ntTSL 5 BASIC4.01□□□□□ -1.77
CXCL1P09341 ENPP7P9-201ENST00000514456 627 ntBASIC4.01□□□□□ -1.77
CXCL1P09341 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC4.01□□□□□ -1.77
CXCL1P09341 AC113191.1-201ENST00000517759 403 ntBASIC4.01□□□□□ -1.77
CXCL1P09341 AC099805.1-205ENST00000521794 837 ntTSL 2 BASIC4.01□□□□□ -1.77
CXCL1P09341 IGHVIII-11-1-201ENST00000522733 267 ntBASIC4.01□□□□□ -1.77
CXCL1P09341 MINCR-206ENST00000524335 499 ntTSL 2 BASIC4.01□□□□□ -1.77
CXCL1P09341 AP001000.1-201ENST00000526843 742 ntBASIC4.01□□□□□ -1.77
CXCL1P09341 AC005868.1-201ENST00000536421 331 ntBASIC4.01□□□□□ -1.77
CXCL1P09341 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC4.01□□□□□ -1.77
CXCL1P09341 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC4.01□□□□□ -1.77
CXCL1P09341 RN7SL356P-201ENST00000582228 248 ntBASIC4.01□□□□□ -1.77
CXCL1P09341 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC4.01□□□□□ -1.77
CXCL1P09341 AC091979.2-201ENST00000607514 214 ntBASIC4.01□□□□□ -1.77
CXCL1P09341 AC108359.1-201ENST00000616451 1211 ntBASIC4.01□□□□□ -1.77
CXCL1P09341 AP005431.1-201ENST00000618479 319 ntBASIC4.01□□□□□ -1.77
CXCL1P09341 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
CXCL1P09341 AP003400.3-201ENST00000624904 346 ntBASIC4.01□□□□□ -1.77
CXCL1P09341 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
CXCL1P09341 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC4.01□□□□□ -1.77
CXCL1P09341 AC138627.1-204ENST00000641894 765 ntBASIC4.01□□□□□ -1.77
CXCL1P09341 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CXCL1P09341 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CXCL1P09341 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CXCL1P09341 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC4.01□□□□□ -1.77
CXCL1P09341 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CXCL1P09341 SCN1A-220ENST00000641603 12506 ntBASIC4.01□□□□□ -1.77
CXCL1P09341 TLK1P1-201ENST00000456760 2440 ntBASIC4.01□□□□□ -1.77
CXCL1P09341 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.01□□□□□ -1.77
CXCL1P09341 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CXCL1P09341 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
CXCL1P09341 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4□□□□□ -1.77
CXCL1P09341 NAMPTP1-201ENST00000440465 2514 ntBASIC4□□□□□ -1.77
CXCL1P09341 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC4□□□□□ -1.77
CXCL1P09341 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC4□□□□□ -1.77
CXCL1P09341 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC4□□□□□ -1.77
CXCL1P09341 AC023421.1-201ENST00000590535 1785 ntBASIC4□□□□□ -1.77
CXCL1P09341 AL138820.1-201ENST00000617901 5305 ntBASIC4□□□□□ -1.77
CXCL1P09341 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4□□□□□ -1.77
CXCL1P09341 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC4□□□□□ -1.77
CXCL1P09341 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 158.6 ms