Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
CD48P09326 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
CD48P09326 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
CD48P09326 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC5.49□□□□□ -1.53
CD48P09326 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
CD48P09326 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.49□□□□□ -1.53
CD48P09326 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CD48P09326 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.48□□□□□ -1.53
CD48P09326 AC233968.1-201ENST00000611212 1300 ntBASIC5.48□□□□□ -1.53
CD48P09326 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC5.48□□□□□ -1.53
CD48P09326 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CD48P09326 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.48□□□□□ -1.53
CD48P09326 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC5.48□□□□□ -1.53
CD48P09326 THAP12P5-201ENST00000405864 2275 ntBASIC5.48□□□□□ -1.53
CD48P09326 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CD48P09326 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CD48P09326 ELOC-201ENST00000284811 683 ntAPPRIS P1 TSL 3 BASIC5.48□□□□□ -1.53
CD48P09326 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC5.48□□□□□ -1.53
CD48P09326 MIR589-201ENST00000385238 99 ntBASIC5.48□□□□□ -1.53
CD48P09326 AL513325.1-201ENST00000417716 1034 ntBASIC5.48□□□□□ -1.53
CD48P09326 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC5.48□□□□□ -1.53
CD48P09326 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CD48P09326 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC5.48□□□□□ -1.53
CD48P09326 AC090018.1-201ENST00000434369 367 ntBASIC5.48□□□□□ -1.53
CD48P09326 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC5.48□□□□□ -1.53
CD48P09326 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC5.48□□□□□ -1.53
CD48P09326 OR52E3P-201ENST00000452083 936 ntBASIC5.48□□□□□ -1.53
CD48P09326 AC007386.1-201ENST00000455212 582 ntBASIC5.48□□□□□ -1.53
CD48P09326 RPL7P45-201ENST00000455851 743 ntBASIC5.48□□□□□ -1.53
CD48P09326 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.48□□□□□ -1.53
CD48P09326 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC5.48□□□□□ -1.53
CD48P09326 EIF3KP3-201ENST00000514461 639 ntBASIC5.48□□□□□ -1.53
CD48P09326 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC5.48□□□□□ -1.53
CD48P09326 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC5.48□□□□□ -1.53
CD48P09326 HMGB1P40-201ENST00000525121 540 ntBASIC5.48□□□□□ -1.53
CD48P09326 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC5.48□□□□□ -1.53
CD48P09326 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC5.48□□□□□ -1.53
CD48P09326 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC5.48□□□□□ -1.53
CD48P09326 AC106730.2-201ENST00000566641 540 ntBASIC5.48□□□□□ -1.53
CD48P09326 TMF1P1-201ENST00000576058 373 ntBASIC5.48□□□□□ -1.53
CD48P09326 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CD48P09326 AC015849.6-201ENST00000605454 474 ntBASIC5.48□□□□□ -1.53
CD48P09326 AC007620.3-201ENST00000608131 497 ntBASIC5.48□□□□□ -1.53
CD48P09326 AL354696.1-201ENST00000614652 497 ntBASIC5.48□□□□□ -1.53
CD48P09326 AC005840.5-201ENST00000619166 599 ntBASIC5.48□□□□□ -1.53
CD48P09326 AL353684.1-201ENST00000622677 1120 ntBASIC5.48□□□□□ -1.53
CD48P09326 AP000720.1-201ENST00000625091 483 ntBASIC5.48□□□□□ -1.53
CD48P09326 FRG1EP-201ENST00000634469 770 ntBASIC5.48□□□□□ -1.53
CD48P09326 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CD48P09326 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC5.48□□□□□ -1.53
CD48P09326 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
CD48P09326 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC5.48□□□□□ -1.53
CD48P09326 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.48□□□□□ -1.53
CD48P09326 CYP4Z2P-201ENST00000423332 1512 ntBASIC5.48□□□□□ -1.53
CD48P09326 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
CD48P09326 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
CD48P09326 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.47□□□□□ -1.53
CD48P09326 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
CD48P09326 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CD48P09326 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
CD48P09326 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC5.47□□□□□ -1.53
CD48P09326 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
CD48P09326 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.47□□□□□ -1.53
CD48P09326 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.47□□□□□ -1.53
CD48P09326 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
CD48P09326 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
CD48P09326 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CD48P09326 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CD48P09326 HSPA8P15-201ENST00000401676 786 ntBASIC5.47□□□□□ -1.53
CD48P09326 RNU6ATAC18P-201ENST00000408413 101 ntBASIC5.47□□□□□ -1.53
CD48P09326 RNA5SP487-201ENST00000410186 122 ntBASIC5.47□□□□□ -1.53
CD48P09326 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC5.47□□□□□ -1.53
CD48P09326 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC5.47□□□□□ -1.53
CD48P09326 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC5.47□□□□□ -1.53
CD48P09326 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC5.47□□□□□ -1.53
CD48P09326 MTND2P11-201ENST00000423638 648 ntBASIC5.47□□□□□ -1.53
CD48P09326 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC5.47□□□□□ -1.53
CD48P09326 ENPP7P11-201ENST00000505915 627 ntBASIC5.47□□□□□ -1.53
CD48P09326 AC098976.1-201ENST00000513014 541 ntBASIC5.47□□□□□ -1.53
CD48P09326 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC5.47□□□□□ -1.53
CD48P09326 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC5.47□□□□□ -1.53
CD48P09326 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC5.47□□□□□ -1.53
CD48P09326 PRPF19P1-201ENST00000584766 898 ntBASIC5.47□□□□□ -1.53
CD48P09326 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC5.47□□□□□ -1.53
CD48P09326 GMFG-202ENST00000594700 397 ntTSL 2 BASIC5.47□□□□□ -1.53
CD48P09326 AC245128.3-201ENST00000594721 748 ntBASIC5.47□□□□□ -1.53
CD48P09326 AC005252.1-201ENST00000604518 1063 ntBASIC5.47□□□□□ -1.53
CD48P09326 BNIP3P7-201ENST00000605641 516 ntBASIC5.47□□□□□ -1.53
CD48P09326 AC073592.7-201ENST00000623659 507 ntBASIC5.47□□□□□ -1.53
CD48P09326 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC5.47□□□□□ -1.53
CD48P09326 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
CD48P09326 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
CD48P09326 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
CD48P09326 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CD48P09326 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
CD48P09326 ADAM5-202ENST00000399789 1942 ntBASIC5.46□□□□□ -1.53
CD48P09326 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.53
CD48P09326 OR55B1P-203ENST00000641518 2602 ntBASIC5.46□□□□□ -1.53
CD48P09326 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
CD48P09326 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms