Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC5.23□□□□□ -1.57
NKX2-2O95096 AP005431.1-201ENST00000618479 319 ntBASIC5.23□□□□□ -1.57
NKX2-2O95096 AL359742.1-201ENST00000622497 540 ntBASIC5.23□□□□□ -1.57
NKX2-2O95096 AC068880.4-201ENST00000623082 495 ntBASIC5.23□□□□□ -1.57
NKX2-2O95096 AC007683.2-201ENST00000624681 714 ntBASIC5.23□□□□□ -1.57
NKX2-2O95096 MIR1910-201ENST00000636955 80 ntBASIC5.23□□□□□ -1.57
NKX2-2O95096 RLIMP2-201ENST00000427891 1563 ntBASIC5.23□□□□□ -1.57
NKX2-2O95096 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.23□□□□□ -1.57
NKX2-2O95096 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC5.23□□□□□ -1.57
NKX2-2O95096 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
NKX2-2O95096 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
NKX2-2O95096 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC5.23□□□□□ -1.57
NKX2-2O95096 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
NKX2-2O95096 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
NKX2-2O95096 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
NKX2-2O95096 AL442128.2-201ENST00000620246 1824 ntBASIC5.23□□□□□ -1.57
NKX2-2O95096 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
NKX2-2O95096 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
NKX2-2O95096 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC5.22□□□□□ -1.57
NKX2-2O95096 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC5.22□□□□□ -1.57
NKX2-2O95096 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC5.22□□□□□ -1.57
NKX2-2O95096 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
NKX2-2O95096 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.22□□□□□ -1.57
NKX2-2O95096 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC5.22□□□□□ -1.57
NKX2-2O95096 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
NKX2-2O95096 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC5.22□□□□□ -1.57
NKX2-2O95096 LINC01963-201ENST00000562038 3148 ntBASIC5.22□□□□□ -1.57
NKX2-2O95096 OR13C1P-202ENST00000641378 2919 ntBASIC5.22□□□□□ -1.57
NKX2-2O95096 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC5.22□□□□□ -1.57
NKX2-2O95096 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC5.22□□□□□ -1.57
NKX2-2O95096 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
NKX2-2O95096 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC5.22□□□□□ -1.57
NKX2-2O95096 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
NKX2-2O95096 GAPDHP24-201ENST00000328713 983 ntBASIC5.22□□□□□ -1.57
NKX2-2O95096 RNA5SP131-201ENST00000365452 119 ntBASIC5.22□□□□□ -1.57
NKX2-2O95096 RPL7P58-201ENST00000402913 758 ntBASIC5.22□□□□□ -1.57
NKX2-2O95096 RPL5P19-201ENST00000404228 893 ntBASIC5.22□□□□□ -1.57
NKX2-2O95096 RNU2-17P-201ENST00000410290 190 ntBASIC5.22□□□□□ -1.57
NKX2-2O95096 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC5.22□□□□□ -1.57
NKX2-2O95096 HSPE1P16-201ENST00000426640 348 ntBASIC5.22□□□□□ -1.57
NKX2-2O95096 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC5.22□□□□□ -1.57
NKX2-2O95096 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC5.22□□□□□ -1.57
NKX2-2O95096 AL136988.2-201ENST00000440729 861 ntTSL 3 BASIC5.22□□□□□ -1.57
NKX2-2O95096 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC5.22□□□□□ -1.57
NKX2-2O95096 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC5.22□□□□□ -1.57
NKX2-2O95096 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC5.22□□□□□ -1.57
NKX2-2O95096 AC094085.1-201ENST00000468914 584 ntBASIC5.22□□□□□ -1.57
NKX2-2O95096 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC5.22□□□□□ -1.57
NKX2-2O95096 AC087672.1-201ENST00000479876 766 ntBASIC5.22□□□□□ -1.57
NKX2-2O95096 CDH12P2-201ENST00000504393 298 ntBASIC5.22□□□□□ -1.57
NKX2-2O95096 C1GALT1P2-201ENST00000510813 1104 ntBASIC5.22□□□□□ -1.57
NKX2-2O95096 AC111000.6-201ENST00000514471 709 ntBASIC5.22□□□□□ -1.57
NKX2-2O95096 RNU6-615P-201ENST00000516065 106 ntBASIC5.22□□□□□ -1.57
NKX2-2O95096 SNORA81.2-201ENST00000516868 170 ntBASIC5.22□□□□□ -1.57
NKX2-2O95096 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC5.22□□□□□ -1.57
NKX2-2O95096 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC5.22□□□□□ -1.57
NKX2-2O95096 AP003080.1-202ENST00000526526 915 ntBASIC5.22□□□□□ -1.57
NKX2-2O95096 AC068339.2-201ENST00000534395 618 ntBASIC5.22□□□□□ -1.57
NKX2-2O95096 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC5.22□□□□□ -1.57
NKX2-2O95096 IGBP1P1-201ENST00000554337 1009 ntBASIC5.22□□□□□ -1.57
NKX2-2O95096 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC5.22□□□□□ -1.57
NKX2-2O95096 WDR61-205ENST00000558459 884 ntTSL 3 BASIC5.22□□□□□ -1.57
NKX2-2O95096 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC5.22□□□□□ -1.57
NKX2-2O95096 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC5.22□□□□□ -1.57
NKX2-2O95096 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC5.22□□□□□ -1.57
NKX2-2O95096 AL583832.1-201ENST00000603227 784 ntBASIC5.22□□□□□ -1.57
NKX2-2O95096 SUMO2P14-201ENST00000604488 293 ntBASIC5.22□□□□□ -1.57
NKX2-2O95096 AL138955.1-201ENST00000622881 1040 ntBASIC5.22□□□□□ -1.57
NKX2-2O95096 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC5.22□□□□□ -1.57
NKX2-2O95096 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.22□□□□□ -1.57
NKX2-2O95096 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
NKX2-2O95096 AC083899.1-201ENST00000454465 3819 ntBASIC5.22□□□□□ -1.57
NKX2-2O95096 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC5.22□□□□□ -1.57
NKX2-2O95096 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
NKX2-2O95096 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC5.21□□□□□ -1.57
NKX2-2O95096 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
NKX2-2O95096 MRE11P1-201ENST00000464884 2127 ntBASIC5.21□□□□□ -1.57
NKX2-2O95096 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
NKX2-2O95096 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5.21□□□□□ -1.57
NKX2-2O95096 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
NKX2-2O95096 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
NKX2-2O95096 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC5.21□□□□□ -1.58
NKX2-2O95096 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC5.21□□□□□ -1.58
NKX2-2O95096 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC5.21□□□□□ -1.58
NKX2-2O95096 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
NKX2-2O95096 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC5.21□□□□□ -1.58
NKX2-2O95096 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
NKX2-2O95096 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
NKX2-2O95096 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
NKX2-2O95096 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC5.21□□□□□ -1.58
NKX2-2O95096 RN7SKP185-201ENST00000362813 326 ntBASIC5.21□□□□□ -1.58
NKX2-2O95096 MIR621-201ENST00000384919 96 ntBASIC5.21□□□□□ -1.58
NKX2-2O95096 ATP5HP3-201ENST00000396994 486 ntBASIC5.21□□□□□ -1.58
NKX2-2O95096 HMGB3P7-201ENST00000400214 611 ntBASIC5.21□□□□□ -1.58
NKX2-2O95096 AL354868.1-201ENST00000417077 482 ntBASIC5.21□□□□□ -1.58
NKX2-2O95096 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC5.21□□□□□ -1.58
NKX2-2O95096 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC5.21□□□□□ -1.58
NKX2-2O95096 AC093155.2-201ENST00000420734 937 ntBASIC5.21□□□□□ -1.58
NKX2-2O95096 AC113412.1-201ENST00000425840 504 ntBASIC5.21□□□□□ -1.58
NKX2-2O95096 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC5.21□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 93.1 ms