Protein–RNA interactions for Protein: O75351

VPS4B, Vacuolar protein sorting-associated protein 4B, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4BO75351 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC5.92□□□□□ -1.46
VPS4BO75351 AL360012.1-201ENST00000602813 131 ntBASIC5.92□□□□□ -1.46
VPS4BO75351 AC013244.1-201ENST00000604279 193 ntBASIC5.92□□□□□ -1.46
VPS4BO75351 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC5.92□□□□□ -1.46
VPS4BO75351 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC5.92□□□□□ -1.46
VPS4BO75351 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC5.92□□□□□ -1.46
VPS4BO75351 AC108359.1-201ENST00000616451 1211 ntBASIC5.92□□□□□ -1.46
VPS4BO75351 AL035461.2-201ENST00000619201 524 ntBASIC5.92□□□□□ -1.46
VPS4BO75351 FAM27E2-201ENST00000619668 403 ntBASIC5.92□□□□□ -1.46
VPS4BO75351 AC024884.1-201ENST00000620583 399 ntBASIC5.92□□□□□ -1.46
VPS4BO75351 AC127024.6-201ENST00000621598 424 ntBASIC5.92□□□□□ -1.46
VPS4BO75351 AC138907.10-201ENST00000623708 983 ntBASIC5.92□□□□□ -1.46
VPS4BO75351 AC004777.1-201ENST00000624317 287 ntBASIC5.92□□□□□ -1.46
VPS4BO75351 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
VPS4BO75351 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
VPS4BO75351 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
VPS4BO75351 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC5.92□□□□□ -1.46
VPS4BO75351 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
VPS4BO75351 AC012078.1-201ENST00000405035 1646 ntBASIC5.92□□□□□ -1.46
VPS4BO75351 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
VPS4BO75351 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC5.92□□□□□ -1.46
VPS4BO75351 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC5.92□□□□□ -1.46
VPS4BO75351 AC079298.1-201ENST00000625026 1619 ntBASIC5.92□□□□□ -1.46
VPS4BO75351 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
VPS4BO75351 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
VPS4BO75351 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
VPS4BO75351 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
VPS4BO75351 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC5.91□□□□□ -1.46
VPS4BO75351 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
VPS4BO75351 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
VPS4BO75351 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
VPS4BO75351 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
VPS4BO75351 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
VPS4BO75351 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
VPS4BO75351 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
VPS4BO75351 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC5.91□□□□□ -1.46
VPS4BO75351 THAP12P9-201ENST00000503971 2360 ntBASIC5.91□□□□□ -1.46
VPS4BO75351 SNORD56.4-201ENST00000363883 71 ntBASIC5.91□□□□□ -1.46
VPS4BO75351 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
VPS4BO75351 RNU6-31P-201ENST00000384388 108 ntBASIC5.91□□□□□ -1.46
VPS4BO75351 HMGB1P10-201ENST00000395823 563 ntBASIC5.91□□□□□ -1.46
VPS4BO75351 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC5.91□□□□□ -1.46
VPS4BO75351 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC5.91□□□□□ -1.46
VPS4BO75351 AL160275.1-201ENST00000423632 476 ntAPPRIS P1 TSL 2 BASIC5.91□□□□□ -1.46
VPS4BO75351 RPS7P14-201ENST00000426405 583 ntBASIC5.91□□□□□ -1.46
VPS4BO75351 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
VPS4BO75351 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
VPS4BO75351 RPL12P28-201ENST00000430852 489 ntBASIC5.91□□□□□ -1.46
VPS4BO75351 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC5.91□□□□□ -1.46
VPS4BO75351 MTCYBP31-201ENST00000438855 1122 ntBASIC5.91□□□□□ -1.46
VPS4BO75351 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
VPS4BO75351 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC5.91□□□□□ -1.46
VPS4BO75351 AC097463.1-201ENST00000447288 481 ntBASIC5.91□□□□□ -1.46
VPS4BO75351 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC5.91□□□□□ -1.46
VPS4BO75351 ACA64.1-201ENST00000459171 127 ntBASIC5.91□□□□□ -1.46
VPS4BO75351 RPL12P30-201ENST00000488389 499 ntBASIC5.91□□□□□ -1.46
VPS4BO75351 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC5.91□□□□□ -1.46
VPS4BO75351 CCDC11P1-201ENST00000503137 1162 ntBASIC5.91□□□□□ -1.46
VPS4BO75351 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC5.91□□□□□ -1.46
VPS4BO75351 OR4D12P-201ENST00000509361 911 ntBASIC5.91□□□□□ -1.46
VPS4BO75351 HPRT1P1-201ENST00000509498 657 ntBASIC5.91□□□□□ -1.46
VPS4BO75351 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC5.91□□□□□ -1.46
VPS4BO75351 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC5.91□□□□□ -1.46
VPS4BO75351 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
VPS4BO75351 AC079905.1-201ENST00000549280 475 ntBASIC5.91□□□□□ -1.46
VPS4BO75351 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC5.91□□□□□ -1.46
VPS4BO75351 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC5.91□□□□□ -1.46
VPS4BO75351 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC5.91□□□□□ -1.46
VPS4BO75351 UBA2-208ENST00000592791 910 ntTSL 2 BASIC5.91□□□□□ -1.46
VPS4BO75351 AC125494.2-201ENST00000602431 657 ntBASIC5.91□□□□□ -1.46
VPS4BO75351 MTCO2P22-201ENST00000603246 681 ntBASIC5.91□□□□□ -1.46
VPS4BO75351 AC141002.1-201ENST00000607025 279 ntBASIC5.91□□□□□ -1.46
VPS4BO75351 AC092266.1-201ENST00000610958 165 ntBASIC5.91□□□□□ -1.46
VPS4BO75351 AL355493.4-201ENST00000618530 292 ntBASIC5.91□□□□□ -1.46
VPS4BO75351 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC5.91□□□□□ -1.46
VPS4BO75351 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
VPS4BO75351 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
VPS4BO75351 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC5.91□□□□□ -1.46
VPS4BO75351 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
VPS4BO75351 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC5.91□□□□□ -1.46
VPS4BO75351 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC5.91□□□□□ -1.46
VPS4BO75351 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
VPS4BO75351 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
VPS4BO75351 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.46
VPS4BO75351 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC5.9□□□□□ -1.46
VPS4BO75351 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
VPS4BO75351 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
VPS4BO75351 AL442128.2-201ENST00000620246 1824 ntBASIC5.9□□□□□ -1.46
VPS4BO75351 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC5.9□□□□□ -1.46
VPS4BO75351 AL355488.2-201ENST00000609909 2850 ntBASIC5.9□□□□□ -1.46
VPS4BO75351 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
VPS4BO75351 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC5.9□□□□□ -1.46
VPS4BO75351 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC5.9□□□□□ -1.46
VPS4BO75351 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
VPS4BO75351 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
VPS4BO75351 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC5.9□□□□□ -1.46
VPS4BO75351 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
VPS4BO75351 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC5.9□□□□□ -1.46
VPS4BO75351 MYL6P5-201ENST00000412707 459 ntBASIC5.9□□□□□ -1.46
VPS4BO75351 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC5.9□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 74.3 ms