Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC5.3□□□□□ -1.56
TMX2-CTNND1H3BSU7 AC087763.1-201ENST00000603391 286 ntBASIC5.3□□□□□ -1.56
TMX2-CTNND1H3BSU7 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
TMX2-CTNND1H3BSU7 WWOX-217ENST00000620008 450 ntTSL 2 BASIC5.3□□□□□ -1.56
TMX2-CTNND1H3BSU7 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC5.3□□□□□ -1.56
TMX2-CTNND1H3BSU7 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
TMX2-CTNND1H3BSU7 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
TMX2-CTNND1H3BSU7 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC5.3□□□□□ -1.56
TMX2-CTNND1H3BSU7 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
TMX2-CTNND1H3BSU7 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
TMX2-CTNND1H3BSU7 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
TMX2-CTNND1H3BSU7 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
TMX2-CTNND1H3BSU7 AL449283.1-201ENST00000602631 3403 ntBASIC5.3□□□□□ -1.56
TMX2-CTNND1H3BSU7 MFSD8-239ENST00000641590 2479 ntBASIC5.3□□□□□ -1.56
TMX2-CTNND1H3BSU7 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.3□□□□□ -1.56
TMX2-CTNND1H3BSU7 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
TMX2-CTNND1H3BSU7 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
TMX2-CTNND1H3BSU7 AL034549.2-201ENST00000618285 3373 ntBASIC5.29□□□□□ -1.56
TMX2-CTNND1H3BSU7 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC5.29□□□□□ -1.56
TMX2-CTNND1H3BSU7 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
TMX2-CTNND1H3BSU7 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
TMX2-CTNND1H3BSU7 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
TMX2-CTNND1H3BSU7 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
TMX2-CTNND1H3BSU7 U8.4-201ENST00000363626 134 ntBASIC5.29□□□□□ -1.56
TMX2-CTNND1H3BSU7 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
TMX2-CTNND1H3BSU7 MIR550A3-201ENST00000390735 95 ntBASIC5.29□□□□□ -1.56
TMX2-CTNND1H3BSU7 RNA5SP339-201ENST00000390987 122 ntBASIC5.29□□□□□ -1.56
TMX2-CTNND1H3BSU7 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC5.29□□□□□ -1.56
TMX2-CTNND1H3BSU7 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
TMX2-CTNND1H3BSU7 RPL12P17-201ENST00000432393 498 ntBASIC5.29□□□□□ -1.56
TMX2-CTNND1H3BSU7 TMEM183AP1-205ENST00000432739 290 ntBASIC5.29□□□□□ -1.56
TMX2-CTNND1H3BSU7 RPL12P3-201ENST00000440080 396 ntBASIC5.29□□□□□ -1.56
TMX2-CTNND1H3BSU7 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC5.29□□□□□ -1.56
TMX2-CTNND1H3BSU7 AL596266.1-201ENST00000448132 400 ntBASIC5.29□□□□□ -1.56
TMX2-CTNND1H3BSU7 RPS26P41-201ENST00000450370 284 ntBASIC5.29□□□□□ -1.56
TMX2-CTNND1H3BSU7 AL672138.1-201ENST00000450604 1015 ntBASIC5.29□□□□□ -1.56
TMX2-CTNND1H3BSU7 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC5.29□□□□□ -1.56
TMX2-CTNND1H3BSU7 AL389915.2-201ENST00000454576 441 ntBASIC5.29□□□□□ -1.56
TMX2-CTNND1H3BSU7 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC5.29□□□□□ -1.56
TMX2-CTNND1H3BSU7 OR5D15P-201ENST00000531671 942 ntBASIC5.29□□□□□ -1.56
TMX2-CTNND1H3BSU7 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC5.29□□□□□ -1.56
TMX2-CTNND1H3BSU7 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC5.29□□□□□ -1.56
TMX2-CTNND1H3BSU7 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC5.29□□□□□ -1.56
TMX2-CTNND1H3BSU7 AC009852.2-201ENST00000567898 485 ntBASIC5.29□□□□□ -1.56
TMX2-CTNND1H3BSU7 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC5.29□□□□□ -1.56
TMX2-CTNND1H3BSU7 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC5.29□□□□□ -1.56
TMX2-CTNND1H3BSU7 AL049539.1-201ENST00000611964 459 ntBASIC5.29□□□□□ -1.56
TMX2-CTNND1H3BSU7 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.29□□□□□ -1.56
TMX2-CTNND1H3BSU7 AP002799.1-201ENST00000623552 423 ntBASIC5.29□□□□□ -1.56
TMX2-CTNND1H3BSU7 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
TMX2-CTNND1H3BSU7 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
TMX2-CTNND1H3BSU7 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC5.29□□□□□ -1.56
TMX2-CTNND1H3BSU7 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
TMX2-CTNND1H3BSU7 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
TMX2-CTNND1H3BSU7 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
TMX2-CTNND1H3BSU7 EEF1A1P14-201ENST00000421195 1376 ntBASIC5.29□□□□□ -1.56
TMX2-CTNND1H3BSU7 AC112255.1-201ENST00000624070 2493 ntBASIC5.29□□□□□ -1.56
TMX2-CTNND1H3BSU7 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
TMX2-CTNND1H3BSU7 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
TMX2-CTNND1H3BSU7 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
TMX2-CTNND1H3BSU7 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC5.28□□□□□ -1.56
TMX2-CTNND1H3BSU7 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
TMX2-CTNND1H3BSU7 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.28□□□□□ -1.56
TMX2-CTNND1H3BSU7 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
TMX2-CTNND1H3BSU7 NAP1L4P1-201ENST00000319092 1157 ntBASIC5.28□□□□□ -1.56
TMX2-CTNND1H3BSU7 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
TMX2-CTNND1H3BSU7 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC5.28□□□□□ -1.56
TMX2-CTNND1H3BSU7 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
TMX2-CTNND1H3BSU7 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC5.28□□□□□ -1.56
TMX2-CTNND1H3BSU7 AC245047.2-201ENST00000441060 530 ntBASIC5.28□□□□□ -1.56
TMX2-CTNND1H3BSU7 RPS18P6-201ENST00000476880 458 ntBASIC5.28□□□□□ -1.56
TMX2-CTNND1H3BSU7 AC008953.1-201ENST00000497334 318 ntBASIC5.28□□□□□ -1.56
TMX2-CTNND1H3BSU7 RPEP1-201ENST00000504507 658 ntBASIC5.28□□□□□ -1.56
TMX2-CTNND1H3BSU7 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC5.28□□□□□ -1.56
TMX2-CTNND1H3BSU7 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC5.28□□□□□ -1.56
TMX2-CTNND1H3BSU7 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC5.28□□□□□ -1.56
TMX2-CTNND1H3BSU7 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.28□□□□□ -1.56
TMX2-CTNND1H3BSU7 IGLV3-24-201ENST00000517477 197 ntBASIC5.28□□□□□ -1.56
TMX2-CTNND1H3BSU7 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC5.28□□□□□ -1.56
TMX2-CTNND1H3BSU7 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC5.28□□□□□ -1.56
TMX2-CTNND1H3BSU7 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.28□□□□□ -1.56
TMX2-CTNND1H3BSU7 LINC02281-201ENST00000549013 375 ntTSL 3 BASIC5.28□□□□□ -1.56
TMX2-CTNND1H3BSU7 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.28□□□□□ -1.56
TMX2-CTNND1H3BSU7 AC095055.1-201ENST00000603472 1113 ntBASIC5.28□□□□□ -1.56
TMX2-CTNND1H3BSU7 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC5.28□□□□□ -1.56
TMX2-CTNND1H3BSU7 PACRG-210ENST00000611387 279 ntTSL 5 BASIC5.28□□□□□ -1.56
TMX2-CTNND1H3BSU7 AC026367.3-201ENST00000619032 590 ntBASIC5.28□□□□□ -1.56
TMX2-CTNND1H3BSU7 AP002505.2-201ENST00000623585 696 ntBASIC5.28□□□□□ -1.56
TMX2-CTNND1H3BSU7 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC5.28□□□□□ -1.56
TMX2-CTNND1H3BSU7 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC5.28□□□□□ -1.56
TMX2-CTNND1H3BSU7 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC5.28□□□□□ -1.56
TMX2-CTNND1H3BSU7 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC5.28□□□□□ -1.56
TMX2-CTNND1H3BSU7 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
TMX2-CTNND1H3BSU7 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
TMX2-CTNND1H3BSU7 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
TMX2-CTNND1H3BSU7 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC5.28□□□□□ -1.56
TMX2-CTNND1H3BSU7 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
TMX2-CTNND1H3BSU7 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
TMX2-CTNND1H3BSU7 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.28□□□□□ -1.56
TMX2-CTNND1H3BSU7 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms