Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 RPS7P6-201ENST00000485777 579 ntBASIC5.09□□□□□ -1.59
NPIPA3F8WFD2 CSNK1A1P3-201ENST00000504105 330 ntBASIC5.09□□□□□ -1.59
NPIPA3F8WFD2 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
NPIPA3F8WFD2 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC5.09□□□□□ -1.59
NPIPA3F8WFD2 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC5.09□□□□□ -1.59
NPIPA3F8WFD2 AC087272.1-201ENST00000523624 533 ntBASIC5.09□□□□□ -1.59
NPIPA3F8WFD2 AC012414.2-201ENST00000559474 187 ntBASIC5.09□□□□□ -1.59
NPIPA3F8WFD2 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC5.09□□□□□ -1.59
NPIPA3F8WFD2 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC5.09□□□□□ -1.59
NPIPA3F8WFD2 FKBP1AP1-201ENST00000594588 318 ntBASIC5.09□□□□□ -1.59
NPIPA3F8WFD2 AP002884.5-201ENST00000595053 1132 ntBASIC5.09□□□□□ -1.59
NPIPA3F8WFD2 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC5.09□□□□□ -1.59
NPIPA3F8WFD2 AL360012.1-201ENST00000602813 131 ntBASIC5.09□□□□□ -1.59
NPIPA3F8WFD2 AL359513.1-201ENST00000614364 557 ntBASIC5.09□□□□□ -1.59
NPIPA3F8WFD2 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC5.09□□□□□ -1.59
NPIPA3F8WFD2 AC132068.1-201ENST00000623805 459 ntBASIC5.09□□□□□ -1.59
NPIPA3F8WFD2 CCT5-215ENST00000625723 135 ntTSL 5 BASIC5.09□□□□□ -1.59
NPIPA3F8WFD2 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC5.09□□□□□ -1.59
NPIPA3F8WFD2 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC5.09□□□□□ -1.59
NPIPA3F8WFD2 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC5.09□□□□□ -1.59
NPIPA3F8WFD2 AC068870.3-201ENST00000625077 2536 ntBASIC5.09□□□□□ -1.59
NPIPA3F8WFD2 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC5.09□□□□□ -1.59
NPIPA3F8WFD2 CDC27P2-201ENST00000425026 1922 ntBASIC5.09□□□□□ -1.6
NPIPA3F8WFD2 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
NPIPA3F8WFD2 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC5.09□□□□□ -1.6
NPIPA3F8WFD2 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC5.08□□□□□ -1.6
NPIPA3F8WFD2 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
NPIPA3F8WFD2 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
NPIPA3F8WFD2 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
NPIPA3F8WFD2 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
NPIPA3F8WFD2 CYP4Z2P-201ENST00000423332 1512 ntBASIC5.08□□□□□ -1.6
NPIPA3F8WFD2 FTO-203ENST00000460382 1517 ntTSL 5 BASIC5.08□□□□□ -1.6
NPIPA3F8WFD2 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
NPIPA3F8WFD2 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
NPIPA3F8WFD2 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
NPIPA3F8WFD2 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
NPIPA3F8WFD2 SAMM50P1-201ENST00000455403 1399 ntBASIC5.08□□□□□ -1.6
NPIPA3F8WFD2 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC5.08□□□□□ -1.6
NPIPA3F8WFD2 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
NPIPA3F8WFD2 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
NPIPA3F8WFD2 MIR421-201ENST00000365696 85 ntBASIC5.08□□□□□ -1.6
NPIPA3F8WFD2 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
NPIPA3F8WFD2 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
NPIPA3F8WFD2 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
NPIPA3F8WFD2 AC009804.1-201ENST00000400949 179 ntBASIC5.08□□□□□ -1.6
NPIPA3F8WFD2 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC5.08□□□□□ -1.6
NPIPA3F8WFD2 RPL35AP24-201ENST00000413846 330 ntBASIC5.08□□□□□ -1.6
NPIPA3F8WFD2 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC5.08□□□□□ -1.6
NPIPA3F8WFD2 NENFP1-201ENST00000419476 466 ntBASIC5.08□□□□□ -1.6
NPIPA3F8WFD2 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC5.08□□□□□ -1.6
NPIPA3F8WFD2 AC106901.1-201ENST00000425086 698 ntBASIC5.08□□□□□ -1.6
NPIPA3F8WFD2 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC5.08□□□□□ -1.6
NPIPA3F8WFD2 AL445528.1-201ENST00000426330 420 ntBASIC5.08□□□□□ -1.6
NPIPA3F8WFD2 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC5.08□□□□□ -1.6
NPIPA3F8WFD2 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC5.08□□□□□ -1.6
NPIPA3F8WFD2 MRPS33P4-201ENST00000434892 317 ntBASIC5.08□□□□□ -1.6
NPIPA3F8WFD2 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC5.08□□□□□ -1.6
NPIPA3F8WFD2 AL450023.1-201ENST00000450868 751 ntBASIC5.08□□□□□ -1.6
NPIPA3F8WFD2 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC5.08□□□□□ -1.6
NPIPA3F8WFD2 DUBR-205ENST00000495228 411 ntTSL 2 BASIC5.08□□□□□ -1.6
NPIPA3F8WFD2 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC5.08□□□□□ -1.6
NPIPA3F8WFD2 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC5.08□□□□□ -1.6
NPIPA3F8WFD2 RNU6-760P-201ENST00000516078 97 ntBASIC5.08□□□□□ -1.6
NPIPA3F8WFD2 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
NPIPA3F8WFD2 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC5.08□□□□□ -1.6
NPIPA3F8WFD2 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC5.08□□□□□ -1.6
NPIPA3F8WFD2 AC084824.2-201ENST00000548906 345 ntBASIC5.08□□□□□ -1.6
NPIPA3F8WFD2 AC074029.2-201ENST00000551045 634 ntBASIC5.08□□□□□ -1.6
NPIPA3F8WFD2 AC126615.2-201ENST00000553003 515 ntBASIC5.08□□□□□ -1.6
NPIPA3F8WFD2 HSPE1P2-201ENST00000554777 306 ntBASIC5.08□□□□□ -1.6
NPIPA3F8WFD2 AC092868.3-201ENST00000560515 784 ntBASIC5.08□□□□□ -1.6
NPIPA3F8WFD2 AGGF1P7-201ENST00000562369 913 ntBASIC5.08□□□□□ -1.6
NPIPA3F8WFD2 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.08□□□□□ -1.6
NPIPA3F8WFD2 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC5.08□□□□□ -1.6
NPIPA3F8WFD2 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC5.08□□□□□ -1.6
NPIPA3F8WFD2 SUGT1P3-202ENST00000604259 383 ntBASIC5.08□□□□□ -1.6
NPIPA3F8WFD2 PPATP2-201ENST00000605635 508 ntBASIC5.08□□□□□ -1.6
NPIPA3F8WFD2 AC211433.2-201ENST00000608433 387 ntBASIC5.08□□□□□ -1.6
NPIPA3F8WFD2 AP005131.7-201ENST00000610087 611 ntBASIC5.08□□□□□ -1.6
NPIPA3F8WFD2 PACRG-210ENST00000611387 279 ntTSL 5 BASIC5.08□□□□□ -1.6
NPIPA3F8WFD2 AC009032.1-201ENST00000617574 431 ntBASIC5.08□□□□□ -1.6
NPIPA3F8WFD2 RMST_5.1-201ENST00000618704 126 ntBASIC5.08□□□□□ -1.6
NPIPA3F8WFD2 LINC00216-201ENST00000623548 1126 ntBASIC5.08□□□□□ -1.6
NPIPA3F8WFD2 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC5.08□□□□□ -1.6
NPIPA3F8WFD2 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
NPIPA3F8WFD2 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
NPIPA3F8WFD2 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
NPIPA3F8WFD2 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC5.08□□□□□ -1.6
NPIPA3F8WFD2 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
NPIPA3F8WFD2 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
NPIPA3F8WFD2 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC5.08□□□□□ -1.6
NPIPA3F8WFD2 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
NPIPA3F8WFD2 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
NPIPA3F8WFD2 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.07□□□□□ -1.6
NPIPA3F8WFD2 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
NPIPA3F8WFD2 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
NPIPA3F8WFD2 AC016745.2-201ENST00000608834 3443 ntBASIC5.07□□□□□ -1.6
NPIPA3F8WFD2 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
NPIPA3F8WFD2 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
NPIPA3F8WFD2 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 143.5 ms