Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC5.19□□□□□ -1.58
TRIM49D1C9J1S8 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
TRIM49D1C9J1S8 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC5.19□□□□□ -1.58
TRIM49D1C9J1S8 AL132656.3-201ENST00000606384 1595 ntBASIC5.19□□□□□ -1.58
TRIM49D1C9J1S8 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC5.19□□□□□ -1.58
TRIM49D1C9J1S8 TET1P1-201ENST00000426627 2301 ntBASIC5.19□□□□□ -1.58
TRIM49D1C9J1S8 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5.19□□□□□ -1.58
TRIM49D1C9J1S8 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC5.19□□□□□ -1.58
TRIM49D1C9J1S8 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC5.18□□□□□ -1.58
TRIM49D1C9J1S8 OR5AQ1P-203ENST00000641818 1529 ntBASIC5.18□□□□□ -1.58
TRIM49D1C9J1S8 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC5.18□□□□□ -1.58
TRIM49D1C9J1S8 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
TRIM49D1C9J1S8 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
TRIM49D1C9J1S8 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
TRIM49D1C9J1S8 RN7SKP15-201ENST00000364742 309 ntBASIC5.18□□□□□ -1.58
TRIM49D1C9J1S8 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC5.18□□□□□ -1.58
TRIM49D1C9J1S8 SLC20A1P1-201ENST00000413906 956 ntBASIC5.18□□□□□ -1.58
TRIM49D1C9J1S8 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC5.18□□□□□ -1.58
TRIM49D1C9J1S8 AC017078.1-201ENST00000416146 368 ntBASIC5.18□□□□□ -1.58
TRIM49D1C9J1S8 AC013429.2-201ENST00000418798 781 ntBASIC5.18□□□□□ -1.58
TRIM49D1C9J1S8 PMCHL1-203ENST00000423301 697 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
TRIM49D1C9J1S8 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC5.18□□□□□ -1.58
TRIM49D1C9J1S8 CYCSP51-201ENST00000443545 318 ntBASIC5.18□□□□□ -1.58
TRIM49D1C9J1S8 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC5.18□□□□□ -1.58
TRIM49D1C9J1S8 AC073909.1-201ENST00000447112 999 ntBASIC5.18□□□□□ -1.58
TRIM49D1C9J1S8 MRPL35P2-201ENST00000448009 511 ntBASIC5.18□□□□□ -1.58
TRIM49D1C9J1S8 BTF3P6-201ENST00000448054 499 ntBASIC5.18□□□□□ -1.58
TRIM49D1C9J1S8 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC5.18□□□□□ -1.58
TRIM49D1C9J1S8 RN7SL51P-201ENST00000468230 285 ntBASIC5.18□□□□□ -1.58
TRIM49D1C9J1S8 AC012123.2-201ENST00000485809 248 ntBASIC5.18□□□□□ -1.58
TRIM49D1C9J1S8 AC005412.2-201ENST00000492004 341 ntBASIC5.18□□□□□ -1.58
TRIM49D1C9J1S8 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC5.18□□□□□ -1.58
TRIM49D1C9J1S8 LDHBP3-201ENST00000514909 822 ntBASIC5.18□□□□□ -1.58
TRIM49D1C9J1S8 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
TRIM49D1C9J1S8 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC5.18□□□□□ -1.58
TRIM49D1C9J1S8 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC5.18□□□□□ -1.58
TRIM49D1C9J1S8 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC5.18□□□□□ -1.58
TRIM49D1C9J1S8 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC5.18□□□□□ -1.58
TRIM49D1C9J1S8 PDCD6IPP2-207ENST00000566321 1069 ntBASIC5.18□□□□□ -1.58
TRIM49D1C9J1S8 AC010547.6-201ENST00000571789 193 ntBASIC5.18□□□□□ -1.58
TRIM49D1C9J1S8 MIR4310-201ENST00000582950 57 ntBASIC5.18□□□□□ -1.58
TRIM49D1C9J1S8 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC5.18□□□□□ -1.58
TRIM49D1C9J1S8 SLC8A1-AS1-218ENST00000610721 956 ntTSL 5 BASIC5.18□□□□□ -1.58
TRIM49D1C9J1S8 AL096712.1-201ENST00000614561 159 ntBASIC5.18□□□□□ -1.58
TRIM49D1C9J1S8 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC5.18□□□□□ -1.58
TRIM49D1C9J1S8 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
TRIM49D1C9J1S8 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
TRIM49D1C9J1S8 AC120036.2-201ENST00000509729 1474 ntBASIC5.18□□□□□ -1.58
TRIM49D1C9J1S8 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
TRIM49D1C9J1S8 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
TRIM49D1C9J1S8 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC5.18□□□□□ -1.58
TRIM49D1C9J1S8 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
TRIM49D1C9J1S8 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC5.18□□□□□ -1.58
TRIM49D1C9J1S8 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC5.17□□□□□ -1.58
TRIM49D1C9J1S8 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
TRIM49D1C9J1S8 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
TRIM49D1C9J1S8 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
TRIM49D1C9J1S8 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC5.17□□□□□ -1.58
TRIM49D1C9J1S8 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
TRIM49D1C9J1S8 RNA5SP335-201ENST00000363817 110 ntBASIC5.17□□□□□ -1.58
TRIM49D1C9J1S8 RNA5SP234-201ENST00000363916 119 ntBASIC5.17□□□□□ -1.58
TRIM49D1C9J1S8 RNA5SP90-201ENST00000364801 99 ntBASIC5.17□□□□□ -1.58
TRIM49D1C9J1S8 FIG4-202ENST00000368941 791 ntTSL 3 BASIC5.17□□□□□ -1.58
TRIM49D1C9J1S8 SSX3-202ENST00000376893 800 ntTSL 2 BASIC5.17□□□□□ -1.58
TRIM49D1C9J1S8 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
TRIM49D1C9J1S8 OR8V1P-201ENST00000395193 873 ntBASIC5.17□□□□□ -1.58
TRIM49D1C9J1S8 DSTNP5-201ENST00000427921 523 ntBASIC5.17□□□□□ -1.58
TRIM49D1C9J1S8 AC079807.1-201ENST00000429993 481 ntBASIC5.17□□□□□ -1.58
TRIM49D1C9J1S8 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC5.17□□□□□ -1.58
TRIM49D1C9J1S8 AL390119.1-201ENST00000440329 312 ntBASIC5.17□□□□□ -1.58
TRIM49D1C9J1S8 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC5.17□□□□□ -1.58
TRIM49D1C9J1S8 RANP1-206ENST00000455094 651 ntBASIC5.17□□□□□ -1.58
TRIM49D1C9J1S8 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC5.17□□□□□ -1.58
TRIM49D1C9J1S8 DAP3-209ENST00000465375 729 ntTSL 2 BASIC5.17□□□□□ -1.58
TRIM49D1C9J1S8 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC5.17□□□□□ -1.58
TRIM49D1C9J1S8 AC097173.1-201ENST00000505862 819 ntBASIC5.17□□□□□ -1.58
TRIM49D1C9J1S8 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC5.17□□□□□ -1.58
TRIM49D1C9J1S8 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC5.17□□□□□ -1.58
TRIM49D1C9J1S8 HMGB1P40-201ENST00000525121 540 ntBASIC5.17□□□□□ -1.58
TRIM49D1C9J1S8 OR8A2P-201ENST00000528631 952 ntBASIC5.17□□□□□ -1.58
TRIM49D1C9J1S8 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
TRIM49D1C9J1S8 AC127381.1-201ENST00000555979 939 ntBASIC5.17□□□□□ -1.58
TRIM49D1C9J1S8 AC015720.2-201ENST00000567709 334 ntBASIC5.17□□□□□ -1.58
TRIM49D1C9J1S8 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC5.17□□□□□ -1.58
TRIM49D1C9J1S8 MIR4505-201ENST00000582238 73 ntBASIC5.17□□□□□ -1.58
TRIM49D1C9J1S8 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC5.17□□□□□ -1.58
TRIM49D1C9J1S8 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC5.17□□□□□ -1.58
TRIM49D1C9J1S8 AC015914.2-201ENST00000618167 288 ntBASIC5.17□□□□□ -1.58
TRIM49D1C9J1S8 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
TRIM49D1C9J1S8 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
TRIM49D1C9J1S8 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
TRIM49D1C9J1S8 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
TRIM49D1C9J1S8 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
TRIM49D1C9J1S8 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
TRIM49D1C9J1S8 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
TRIM49D1C9J1S8 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
TRIM49D1C9J1S8 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC5.16□□□□□ -1.58
TRIM49D1C9J1S8 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
TRIM49D1C9J1S8 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
TRIM49D1C9J1S8 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 118.9 ms