Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC4.77□□□□□ -1.65
RHBDD3Q9Y3P4 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC4.77□□□□□ -1.65
RHBDD3Q9Y3P4 AC027369.5-201ENST00000533838 755 ntBASIC4.77□□□□□ -1.65
RHBDD3Q9Y3P4 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC4.77□□□□□ -1.65
RHBDD3Q9Y3P4 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC4.77□□□□□ -1.65
RHBDD3Q9Y3P4 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC4.77□□□□□ -1.65
RHBDD3Q9Y3P4 IGBP1P1-201ENST00000554337 1009 ntBASIC4.77□□□□□ -1.65
RHBDD3Q9Y3P4 AL359219.2-201ENST00000555184 348 ntBASIC4.77□□□□□ -1.65
RHBDD3Q9Y3P4 AC040958.1-201ENST00000561102 201 ntBASIC4.77□□□□□ -1.65
RHBDD3Q9Y3P4 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC4.77□□□□□ -1.65
RHBDD3Q9Y3P4 RN7SL290P-201ENST00000578661 300 ntBASIC4.77□□□□□ -1.65
RHBDD3Q9Y3P4 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC4.77□□□□□ -1.65
RHBDD3Q9Y3P4 AC100767.2-201ENST00000604840 693 ntBASIC4.77□□□□□ -1.65
RHBDD3Q9Y3P4 AC092944.2-201ENST00000605443 889 ntBASIC4.77□□□□□ -1.65
RHBDD3Q9Y3P4 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC4.77□□□□□ -1.65
RHBDD3Q9Y3P4 AC025574.2-201ENST00000615621 514 ntBASIC4.77□□□□□ -1.65
RHBDD3Q9Y3P4 AP003499.2-201ENST00000624100 483 ntBASIC4.77□□□□□ -1.65
RHBDD3Q9Y3P4 SAMMSON-209ENST00000641222 1100 ntBASIC4.77□□□□□ -1.65
RHBDD3Q9Y3P4 AC114786.1-201ENST00000512892 1415 ntBASIC4.77□□□□□ -1.65
RHBDD3Q9Y3P4 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
RHBDD3Q9Y3P4 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
RHBDD3Q9Y3P4 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
RHBDD3Q9Y3P4 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC4.77□□□□□ -1.65
RHBDD3Q9Y3P4 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
RHBDD3Q9Y3P4 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC4.77□□□□□ -1.65
RHBDD3Q9Y3P4 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
RHBDD3Q9Y3P4 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC4.77□□□□□ -1.65
RHBDD3Q9Y3P4 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
RHBDD3Q9Y3P4 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
RHBDD3Q9Y3P4 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
RHBDD3Q9Y3P4 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
RHBDD3Q9Y3P4 FGG-201ENST00000336098 1659 ntTSL 2 BASIC4.77□□□□□ -1.65
RHBDD3Q9Y3P4 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC4.77□□□□□ -1.65
RHBDD3Q9Y3P4 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC4.76□□□□□ -1.65
RHBDD3Q9Y3P4 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
RHBDD3Q9Y3P4 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
RHBDD3Q9Y3P4 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
RHBDD3Q9Y3P4 AC233968.1-201ENST00000611212 1300 ntBASIC4.76□□□□□ -1.65
RHBDD3Q9Y3P4 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
RHBDD3Q9Y3P4 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
RHBDD3Q9Y3P4 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
RHBDD3Q9Y3P4 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
RHBDD3Q9Y3P4 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
RHBDD3Q9Y3P4 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC4.76□□□□□ -1.65
RHBDD3Q9Y3P4 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC4.76□□□□□ -1.65
RHBDD3Q9Y3P4 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC4.76□□□□□ -1.65
RHBDD3Q9Y3P4 AL353625.1-202ENST00000366273 571 ntBASIC4.76□□□□□ -1.65
RHBDD3Q9Y3P4 ZCCHC6-203ENST00000375948 958 ntTSL 2 BASIC4.76□□□□□ -1.65
RHBDD3Q9Y3P4 RNA5SP241-201ENST00000391326 114 ntBASIC4.76□□□□□ -1.65
RHBDD3Q9Y3P4 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
RHBDD3Q9Y3P4 EEF1B2P8-201ENST00000414101 671 ntBASIC4.76□□□□□ -1.65
RHBDD3Q9Y3P4 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC4.76□□□□□ -1.65
RHBDD3Q9Y3P4 BX119321.1-201ENST00000428912 797 ntBASIC4.76□□□□□ -1.65
RHBDD3Q9Y3P4 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC4.76□□□□□ -1.65
RHBDD3Q9Y3P4 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC4.76□□□□□ -1.65
RHBDD3Q9Y3P4 NFYAP1-201ENST00000431953 972 ntBASIC4.76□□□□□ -1.65
RHBDD3Q9Y3P4 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC4.76□□□□□ -1.65
RHBDD3Q9Y3P4 LINC01773-201ENST00000437598 787 ntTSL 2 BASIC4.76□□□□□ -1.65
RHBDD3Q9Y3P4 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC4.76□□□□□ -1.65
RHBDD3Q9Y3P4 AL035090.1-201ENST00000454835 332 ntBASIC4.76□□□□□ -1.65
RHBDD3Q9Y3P4 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC4.76□□□□□ -1.65
RHBDD3Q9Y3P4 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC4.76□□□□□ -1.65
RHBDD3Q9Y3P4 SCARNA20.4-201ENST00000516969 131 ntBASIC4.76□□□□□ -1.65
RHBDD3Q9Y3P4 CYCSP22-201ENST00000517555 339 ntBASIC4.76□□□□□ -1.65
RHBDD3Q9Y3P4 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC4.76□□□□□ -1.65
RHBDD3Q9Y3P4 NOX4-213ENST00000531342 696 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
RHBDD3Q9Y3P4 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC4.76□□□□□ -1.65
RHBDD3Q9Y3P4 SULT1C2P2-201ENST00000562517 294 ntBASIC4.76□□□□□ -1.65
RHBDD3Q9Y3P4 MTCYBP13-201ENST00000578634 1093 ntBASIC4.76□□□□□ -1.65
RHBDD3Q9Y3P4 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
RHBDD3Q9Y3P4 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
RHBDD3Q9Y3P4 TMEM30CP-203ENST00000637814 1035 ntBASIC4.76□□□□□ -1.65
RHBDD3Q9Y3P4 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC4.76□□□□□ -1.65
RHBDD3Q9Y3P4 AC138627.1-204ENST00000641894 765 ntBASIC4.76□□□□□ -1.65
RHBDD3Q9Y3P4 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
RHBDD3Q9Y3P4 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
RHBDD3Q9Y3P4 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC4.76□□□□□ -1.65
RHBDD3Q9Y3P4 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
RHBDD3Q9Y3P4 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
RHBDD3Q9Y3P4 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
RHBDD3Q9Y3P4 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC4.75□□□□□ -1.65
RHBDD3Q9Y3P4 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
RHBDD3Q9Y3P4 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
RHBDD3Q9Y3P4 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC4.75□□□□□ -1.65
RHBDD3Q9Y3P4 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC4.75□□□□□ -1.65
RHBDD3Q9Y3P4 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
RHBDD3Q9Y3P4 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
RHBDD3Q9Y3P4 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
RHBDD3Q9Y3P4 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
RHBDD3Q9Y3P4 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
RHBDD3Q9Y3P4 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
RHBDD3Q9Y3P4 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC4.75□□□□□ -1.65
RHBDD3Q9Y3P4 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
RHBDD3Q9Y3P4 FHIT-201ENST00000341848 174 ntTSL 3 BASIC4.75□□□□□ -1.65
RHBDD3Q9Y3P4 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
RHBDD3Q9Y3P4 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
RHBDD3Q9Y3P4 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
RHBDD3Q9Y3P4 PPCS-201ENST00000372556 984 ntTSL 2 BASIC4.75□□□□□ -1.65
RHBDD3Q9Y3P4 MIR621-201ENST00000384919 96 ntBASIC4.75□□□□□ -1.65
RHBDD3Q9Y3P4 MT-RNR1-201ENST00000389680 954 ntBASIC4.75□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 137.7 ms