Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 RPL12P43-201ENST00000420608 499 ntBASIC5.06□□□□□ -1.6
NPIPA1Q9UND3 AL133325.1-201ENST00000421090 382 ntBASIC5.06□□□□□ -1.6
NPIPA1Q9UND3 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
NPIPA1Q9UND3 AL139148.1-201ENST00000427122 680 ntBASIC5.06□□□□□ -1.6
NPIPA1Q9UND3 FTLP19-201ENST00000433300 394 ntBASIC5.06□□□□□ -1.6
NPIPA1Q9UND3 AC138761.5-201ENST00000433967 325 ntBASIC5.06□□□□□ -1.6
NPIPA1Q9UND3 GAPDHP58-201ENST00000438477 1006 ntBASIC5.06□□□□□ -1.6
NPIPA1Q9UND3 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC5.06□□□□□ -1.6
NPIPA1Q9UND3 AURKAPS1-201ENST00000451805 1212 ntBASIC5.06□□□□□ -1.6
NPIPA1Q9UND3 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC5.06□□□□□ -1.6
NPIPA1Q9UND3 SNORD125-201ENST00000459538 96 ntBASIC5.06□□□□□ -1.6
NPIPA1Q9UND3 ABCC13-202ENST00000463099 3842 ntBASIC5.06□□□□□ -1.6
NPIPA1Q9UND3 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC5.06□□□□□ -1.6
NPIPA1Q9UND3 DEFB109A-201ENST00000482450 265 ntBASIC5.06□□□□□ -1.6
NPIPA1Q9UND3 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC5.06□□□□□ -1.6
NPIPA1Q9UND3 AC008953.1-201ENST00000497334 318 ntBASIC5.06□□□□□ -1.6
NPIPA1Q9UND3 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC5.06□□□□□ -1.6
NPIPA1Q9UND3 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.06□□□□□ -1.6
NPIPA1Q9UND3 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC5.06□□□□□ -1.6
NPIPA1Q9UND3 AL118522.2-201ENST00000616045 615 ntBASIC5.06□□□□□ -1.6
NPIPA1Q9UND3 AC037198.3-201ENST00000616754 526 ntBASIC5.06□□□□□ -1.6
NPIPA1Q9UND3 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC5.06□□□□□ -1.6
NPIPA1Q9UND3 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC5.06□□□□□ -1.6
NPIPA1Q9UND3 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
NPIPA1Q9UND3 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC5.06□□□□□ -1.6
NPIPA1Q9UND3 AC087516.1-201ENST00000561236 2428 ntBASIC5.06□□□□□ -1.6
NPIPA1Q9UND3 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.06□□□□□ -1.6
NPIPA1Q9UND3 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
NPIPA1Q9UND3 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
NPIPA1Q9UND3 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
NPIPA1Q9UND3 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC5.06□□□□□ -1.6
NPIPA1Q9UND3 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
NPIPA1Q9UND3 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5.06□□□□□ -1.6
NPIPA1Q9UND3 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
NPIPA1Q9UND3 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
NPIPA1Q9UND3 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC5.06□□□□□ -1.6
NPIPA1Q9UND3 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
NPIPA1Q9UND3 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC5.06□□□□□ -1.6
NPIPA1Q9UND3 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC5.05□□□□□ -1.6
NPIPA1Q9UND3 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC5.05□□□□□ -1.6
NPIPA1Q9UND3 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
NPIPA1Q9UND3 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.05□□□□□ -1.6
NPIPA1Q9UND3 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
NPIPA1Q9UND3 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
NPIPA1Q9UND3 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.05□□□□□ -1.6
NPIPA1Q9UND3 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
NPIPA1Q9UND3 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.05□□□□□ -1.6
NPIPA1Q9UND3 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
NPIPA1Q9UND3 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
NPIPA1Q9UND3 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
NPIPA1Q9UND3 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
NPIPA1Q9UND3 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC5.05□□□□□ -1.6
NPIPA1Q9UND3 AC006484.1-201ENST00000435086 1884 ntBASIC5.05□□□□□ -1.6
NPIPA1Q9UND3 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
NPIPA1Q9UND3 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.05□□□□□ -1.6
NPIPA1Q9UND3 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
NPIPA1Q9UND3 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC5.05□□□□□ -1.6
NPIPA1Q9UND3 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
NPIPA1Q9UND3 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.05□□□□□ -1.6
NPIPA1Q9UND3 AC092681.1-201ENST00000297369 291 ntBASIC5.05□□□□□ -1.6
NPIPA1Q9UND3 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
NPIPA1Q9UND3 RNA5SP453-201ENST00000362503 119 ntBASIC5.05□□□□□ -1.6
NPIPA1Q9UND3 RNA5SP326-201ENST00000363209 110 ntBASIC5.05□□□□□ -1.6
NPIPA1Q9UND3 RNU6-1331P-201ENST00000363658 106 ntBASIC5.05□□□□□ -1.6
NPIPA1Q9UND3 SLC35E1P1-201ENST00000419313 864 ntBASIC5.05□□□□□ -1.6
NPIPA1Q9UND3 NANOGP4-201ENST00000427230 913 ntBASIC5.05□□□□□ -1.6
NPIPA1Q9UND3 OR6D1P-201ENST00000436165 939 ntBASIC5.05□□□□□ -1.6
NPIPA1Q9UND3 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC5.05□□□□□ -1.6
NPIPA1Q9UND3 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC5.05□□□□□ -1.6
NPIPA1Q9UND3 AC093763.2-201ENST00000505334 1223 ntBASIC5.05□□□□□ -1.6
NPIPA1Q9UND3 PGAM1P13-201ENST00000507497 754 ntBASIC5.05□□□□□ -1.6
NPIPA1Q9UND3 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC5.05□□□□□ -1.6
NPIPA1Q9UND3 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC5.05□□□□□ -1.6
NPIPA1Q9UND3 IGLV3-24-201ENST00000517477 197 ntBASIC5.05□□□□□ -1.6
NPIPA1Q9UND3 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC5.05□□□□□ -1.6
NPIPA1Q9UND3 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC5.05□□□□□ -1.6
NPIPA1Q9UND3 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC5.05□□□□□ -1.6
NPIPA1Q9UND3 MIR4311-201ENST00000580794 100 ntBASIC5.05□□□□□ -1.6
NPIPA1Q9UND3 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC5.05□□□□□ -1.6
NPIPA1Q9UND3 NF1P10-201ENST00000613227 742 ntBASIC5.05□□□□□ -1.6
NPIPA1Q9UND3 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC5.05□□□□□ -1.6
NPIPA1Q9UND3 AC053481.2-202ENST00000582394 1500 ntBASIC5.05□□□□□ -1.6
NPIPA1Q9UND3 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
NPIPA1Q9UND3 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
NPIPA1Q9UND3 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
NPIPA1Q9UND3 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
NPIPA1Q9UND3 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
NPIPA1Q9UND3 AC104964.3-201ENST00000606115 2860 ntBASIC5.05□□□□□ -1.6
NPIPA1Q9UND3 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
NPIPA1Q9UND3 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
NPIPA1Q9UND3 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC5.04□□□□□ -1.6
NPIPA1Q9UND3 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
NPIPA1Q9UND3 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC5.04□□□□□ -1.6
NPIPA1Q9UND3 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC5.04□□□□□ -1.6
NPIPA1Q9UND3 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
NPIPA1Q9UND3 AC144833.1-201ENST00000567953 4089 ntBASIC5.04□□□□□ -1.6
NPIPA1Q9UND3 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
NPIPA1Q9UND3 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
NPIPA1Q9UND3 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.04□□□□□ -1.6
NPIPA1Q9UND3 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms