Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 RNU1-74P-201ENST00000384108 171 ntBASIC5.02□□□□□ -1.61
VPS29Q9UBQ0 RNU1-77P-201ENST00000390868 162 ntBASIC5.02□□□□□ -1.61
VPS29Q9UBQ0 RNA5SP339-201ENST00000390987 122 ntBASIC5.02□□□□□ -1.61
VPS29Q9UBQ0 AL390774.1-201ENST00000411924 246 ntBASIC5.02□□□□□ -1.61
VPS29Q9UBQ0 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC5.02□□□□□ -1.61
VPS29Q9UBQ0 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC5.02□□□□□ -1.61
VPS29Q9UBQ0 AC104843.2-201ENST00000427666 297 ntBASIC5.02□□□□□ -1.61
VPS29Q9UBQ0 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC5.02□□□□□ -1.61
VPS29Q9UBQ0 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC5.02□□□□□ -1.61
VPS29Q9UBQ0 CYCSP12-201ENST00000437729 300 ntBASIC5.02□□□□□ -1.61
VPS29Q9UBQ0 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC5.02□□□□□ -1.61
VPS29Q9UBQ0 SUMO2P4-201ENST00000504193 276 ntBASIC5.02□□□□□ -1.61
VPS29Q9UBQ0 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC5.02□□□□□ -1.61
VPS29Q9UBQ0 RNU6-964P-201ENST00000516524 69 ntBASIC5.02□□□□□ -1.61
VPS29Q9UBQ0 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC5.02□□□□□ -1.61
VPS29Q9UBQ0 AC006349.1-201ENST00000555526 235 ntBASIC5.02□□□□□ -1.61
VPS29Q9UBQ0 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC5.02□□□□□ -1.61
VPS29Q9UBQ0 RPL10P14-201ENST00000565265 298 ntBASIC5.02□□□□□ -1.61
VPS29Q9UBQ0 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
VPS29Q9UBQ0 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
VPS29Q9UBQ0 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC5.02□□□□□ -1.61
VPS29Q9UBQ0 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
VPS29Q9UBQ0 AL589674.2-201ENST00000604304 337 ntBASIC5.02□□□□□ -1.61
VPS29Q9UBQ0 REV3L-214ENST00000619481 969 ntTSL 5 BASIC5.02□□□□□ -1.61
VPS29Q9UBQ0 AP001962.1-201ENST00000624114 559 ntBASIC5.02□□□□□ -1.61
VPS29Q9UBQ0 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC5.02□□□□□ -1.61
VPS29Q9UBQ0 AC103703.1-201ENST00000634783 663 ntBASIC5.02□□□□□ -1.61
VPS29Q9UBQ0 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC5.02□□□□□ -1.61
VPS29Q9UBQ0 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
VPS29Q9UBQ0 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
VPS29Q9UBQ0 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
VPS29Q9UBQ0 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
VPS29Q9UBQ0 AC008079.2-201ENST00000623543 20396 ntBASIC5.02□□□□□ -1.61
VPS29Q9UBQ0 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.02□□□□□ -1.61
VPS29Q9UBQ0 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
VPS29Q9UBQ0 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
VPS29Q9UBQ0 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC5.01□□□□□ -1.61
VPS29Q9UBQ0 OR55B1P-203ENST00000641518 2602 ntBASIC5.01□□□□□ -1.61
VPS29Q9UBQ0 AC011755.1-201ENST00000623763 2049 ntBASIC5.01□□□□□ -1.61
VPS29Q9UBQ0 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC5.01□□□□□ -1.61
VPS29Q9UBQ0 AC092747.4-201ENST00000620519 1861 ntBASIC5.01□□□□□ -1.61
VPS29Q9UBQ0 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
VPS29Q9UBQ0 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
VPS29Q9UBQ0 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
VPS29Q9UBQ0 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC5.01□□□□□ -1.61
VPS29Q9UBQ0 RNU1-149P-201ENST00000390870 161 ntBASIC5.01□□□□□ -1.61
VPS29Q9UBQ0 SNORA17A-201ENST00000391185 133 ntBASIC5.01□□□□□ -1.61
VPS29Q9UBQ0 XIST-201ENST00000416330 750 ntTSL 2 BASIC5.01□□□□□ -1.61
VPS29Q9UBQ0 FAM96AP1-201ENST00000430879 482 ntBASIC5.01□□□□□ -1.61
VPS29Q9UBQ0 CYCSP6-201ENST00000434498 302 ntBASIC5.01□□□□□ -1.61
VPS29Q9UBQ0 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC5.01□□□□□ -1.61
VPS29Q9UBQ0 AC108161.1-201ENST00000461060 402 ntBASIC5.01□□□□□ -1.61
VPS29Q9UBQ0 AC021660.1-201ENST00000465006 554 ntBASIC5.01□□□□□ -1.61
VPS29Q9UBQ0 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC5.01□□□□□ -1.61
VPS29Q9UBQ0 RPEP1-201ENST00000504507 658 ntBASIC5.01□□□□□ -1.61
VPS29Q9UBQ0 ENPP7P11-201ENST00000505915 627 ntBASIC5.01□□□□□ -1.61
VPS29Q9UBQ0 SSX6-203ENST00000509958 336 ntTSL 3 BASIC5.01□□□□□ -1.61
VPS29Q9UBQ0 AC012400.1-201ENST00000518452 381 ntBASIC5.01□□□□□ -1.61
VPS29Q9UBQ0 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC5.01□□□□□ -1.61
VPS29Q9UBQ0 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC5.01□□□□□ -1.61
VPS29Q9UBQ0 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC5.01□□□□□ -1.61
VPS29Q9UBQ0 AL359219.2-201ENST00000555184 348 ntBASIC5.01□□□□□ -1.61
VPS29Q9UBQ0 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC5.01□□□□□ -1.61
VPS29Q9UBQ0 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC5.01□□□□□ -1.61
VPS29Q9UBQ0 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC5.01□□□□□ -1.61
VPS29Q9UBQ0 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
VPS29Q9UBQ0 AC118658.2-201ENST00000618697 459 ntBASIC5.01□□□□□ -1.61
VPS29Q9UBQ0 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC5.01□□□□□ -1.61
VPS29Q9UBQ0 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC5.01□□□□□ -1.61
VPS29Q9UBQ0 SNORA17.5-201ENST00000630429 132 ntBASIC5.01□□□□□ -1.61
VPS29Q9UBQ0 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
VPS29Q9UBQ0 AP000473.2-201ENST00000602659 1537 ntBASIC5.01□□□□□ -1.61
VPS29Q9UBQ0 AL022322.2-201ENST00000624072 20397 ntBASIC5.01□□□□□ -1.61
VPS29Q9UBQ0 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.01□□□□□ -1.61
VPS29Q9UBQ0 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
VPS29Q9UBQ0 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.61
VPS29Q9UBQ0 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
VPS29Q9UBQ0 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC5.01□□□□□ -1.61
VPS29Q9UBQ0 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5□□□□□ -1.61
VPS29Q9UBQ0 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC5□□□□□ -1.61
VPS29Q9UBQ0 AC116158.1-201ENST00000560231 2129 ntBASIC5□□□□□ -1.61
VPS29Q9UBQ0 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC5□□□□□ -1.61
VPS29Q9UBQ0 ICE2P1-201ENST00000512800 1849 ntBASIC5□□□□□ -1.61
VPS29Q9UBQ0 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5□□□□□ -1.61
VPS29Q9UBQ0 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
VPS29Q9UBQ0 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC5□□□□□ -1.61
VPS29Q9UBQ0 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC5□□□□□ -1.61
VPS29Q9UBQ0 PHACTR2P1-201ENST00000605639 1414 ntBASIC5□□□□□ -1.61
VPS29Q9UBQ0 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
VPS29Q9UBQ0 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC5□□□□□ -1.61
VPS29Q9UBQ0 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC5□□□□□ -1.61
VPS29Q9UBQ0 RN7SKP81-201ENST00000365603 331 ntBASIC5□□□□□ -1.61
VPS29Q9UBQ0 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
VPS29Q9UBQ0 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC5□□□□□ -1.61
VPS29Q9UBQ0 AC009804.1-201ENST00000400949 179 ntBASIC5□□□□□ -1.61
VPS29Q9UBQ0 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC5□□□□□ -1.61
VPS29Q9UBQ0 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC5□□□□□ -1.61
VPS29Q9UBQ0 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC5□□□□□ -1.61
VPS29Q9UBQ0 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC5□□□□□ -1.61
VPS29Q9UBQ0 AC009238.2-201ENST00000431026 355 ntBASIC5□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms