Protein–RNA interactions for Protein: Q9UBP4

DKK3, Dickkopf-related protein 3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK3Q9UBP4 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
DKK3Q9UBP4 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC6.02□□□□□ -1.45
DKK3Q9UBP4 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
DKK3Q9UBP4 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC6.02□□□□□ -1.45
DKK3Q9UBP4 RALGAPA1P1-201ENST00000443361 6232 ntBASIC6.02□□□□□ -1.45
DKK3Q9UBP4 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
DKK3Q9UBP4 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
DKK3Q9UBP4 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC6.02□□□□□ -1.45
DKK3Q9UBP4 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC6.02□□□□□ -1.45
DKK3Q9UBP4 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
DKK3Q9UBP4 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
DKK3Q9UBP4 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC6.01□□□□□ -1.45
DKK3Q9UBP4 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC6.01□□□□□ -1.45
DKK3Q9UBP4 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC6.01□□□□□ -1.45
DKK3Q9UBP4 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC6.01□□□□□ -1.45
DKK3Q9UBP4 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC6.01□□□□□ -1.45
DKK3Q9UBP4 SAMMSON-213ENST00000641336 1521 ntBASIC6.01□□□□□ -1.45
DKK3Q9UBP4 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
DKK3Q9UBP4 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
DKK3Q9UBP4 AMELX-201ENST00000348912 737 ntTSL 5 BASIC6.01□□□□□ -1.45
DKK3Q9UBP4 RNU1-150P-201ENST00000362491 162 ntBASIC6.01□□□□□ -1.45
DKK3Q9UBP4 SNRPEP6-201ENST00000407465 277 ntBASIC6.01□□□□□ -1.45
DKK3Q9UBP4 MIR1203-201ENST00000408812 85 ntBASIC6.01□□□□□ -1.45
DKK3Q9UBP4 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC6.01□□□□□ -1.45
DKK3Q9UBP4 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC6.01□□□□□ -1.45
DKK3Q9UBP4 Z93019.1-201ENST00000416450 973 ntBASIC6.01□□□□□ -1.45
DKK3Q9UBP4 AC015977.1-201ENST00000418887 292 ntBASIC6.01□□□□□ -1.45
DKK3Q9UBP4 ARAFP1-201ENST00000422172 605 ntBASIC6.01□□□□□ -1.45
DKK3Q9UBP4 MTCO1P45-201ENST00000431457 267 ntBASIC6.01□□□□□ -1.45
DKK3Q9UBP4 RPS26P4-201ENST00000431743 355 ntBASIC6.01□□□□□ -1.45
DKK3Q9UBP4 AL445928.1-201ENST00000435545 222 ntBASIC6.01□□□□□ -1.45
DKK3Q9UBP4 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC6.01□□□□□ -1.45
DKK3Q9UBP4 RPS7P3-201ENST00000443360 580 ntBASIC6.01□□□□□ -1.45
DKK3Q9UBP4 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC6.01□□□□□ -1.45
DKK3Q9UBP4 GAS5-218ENST00000448718 565 ntTSL 2 BASIC6.01□□□□□ -1.45
DKK3Q9UBP4 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC6.01□□□□□ -1.45
DKK3Q9UBP4 SDC4P-201ENST00000453285 601 ntBASIC6.01□□□□□ -1.45
DKK3Q9UBP4 HLA-DPA3-207ENST00000454398 229 ntBASIC6.01□□□□□ -1.45
DKK3Q9UBP4 AC239798.3-201ENST00000454459 408 ntBASIC6.01□□□□□ -1.45
DKK3Q9UBP4 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC6.01□□□□□ -1.45
DKK3Q9UBP4 MTND2P6-201ENST00000455337 1030 ntBASIC6.01□□□□□ -1.45
DKK3Q9UBP4 ACA64.1-201ENST00000459171 127 ntBASIC6.01□□□□□ -1.45
DKK3Q9UBP4 RN7SL174P-201ENST00000475578 289 ntBASIC6.01□□□□□ -1.45
DKK3Q9UBP4 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC6.01□□□□□ -1.45
DKK3Q9UBP4 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC6.01□□□□□ -1.45
DKK3Q9UBP4 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC6.01□□□□□ -1.45
DKK3Q9UBP4 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC6.01□□□□□ -1.45
DKK3Q9UBP4 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC6.01□□□□□ -1.45
DKK3Q9UBP4 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
DKK3Q9UBP4 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC6.01□□□□□ -1.45
DKK3Q9UBP4 AC008429.4-201ENST00000521201 182 ntBASIC6.01□□□□□ -1.45
DKK3Q9UBP4 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC6.01□□□□□ -1.45
DKK3Q9UBP4 AP001636.2-201ENST00000525517 696 ntBASIC6.01□□□□□ -1.45
DKK3Q9UBP4 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC6.01□□□□□ -1.45
DKK3Q9UBP4 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC6.01□□□□□ -1.45
DKK3Q9UBP4 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC6.01□□□□□ -1.45
DKK3Q9UBP4 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC6.01□□□□□ -1.45
DKK3Q9UBP4 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
DKK3Q9UBP4 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC6.01□□□□□ -1.45
DKK3Q9UBP4 AGGF1P5-201ENST00000567900 919 ntBASIC6.01□□□□□ -1.45
DKK3Q9UBP4 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
DKK3Q9UBP4 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC6.01□□□□□ -1.45
DKK3Q9UBP4 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC6.01□□□□□ -1.45
DKK3Q9UBP4 AL096803.3-201ENST00000609032 532 ntBASIC6.01□□□□□ -1.45
DKK3Q9UBP4 AC093388.1-201ENST00000609166 430 ntBASIC6.01□□□□□ -1.45
DKK3Q9UBP4 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC6.01□□□□□ -1.45
DKK3Q9UBP4 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC6.01□□□□□ -1.45
DKK3Q9UBP4 AL356752.1-201ENST00000615844 593 ntBASIC6.01□□□□□ -1.45
DKK3Q9UBP4 AC074140.1-201ENST00000621617 208 ntBASIC6.01□□□□□ -1.45
DKK3Q9UBP4 SNX18P12-201ENST00000624821 759 ntBASIC6.01□□□□□ -1.45
DKK3Q9UBP4 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC6.01□□□□□ -1.45
DKK3Q9UBP4 AL590396.4-201ENST00000636779 956 ntBASIC6.01□□□□□ -1.45
DKK3Q9UBP4 MTND2P41-201ENST00000637599 773 ntBASIC6.01□□□□□ -1.45
DKK3Q9UBP4 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
DKK3Q9UBP4 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
DKK3Q9UBP4 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC6.01□□□□□ -1.45
DKK3Q9UBP4 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
DKK3Q9UBP4 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC6.01□□□□□ -1.45
DKK3Q9UBP4 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
DKK3Q9UBP4 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
DKK3Q9UBP4 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
DKK3Q9UBP4 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC6.01□□□□□ -1.45
DKK3Q9UBP4 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
DKK3Q9UBP4 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC6.01□□□□□ -1.45
DKK3Q9UBP4 MTND5P23-201ENST00000430812 1655 ntBASIC6.01□□□□□ -1.45
DKK3Q9UBP4 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
DKK3Q9UBP4 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC6□□□□□ -1.45
DKK3Q9UBP4 CUL4AP1-201ENST00000514750 1863 ntBASIC6□□□□□ -1.45
DKK3Q9UBP4 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC6□□□□□ -1.45
DKK3Q9UBP4 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC6□□□□□ -1.45
DKK3Q9UBP4 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC6□□□□□ -1.45
DKK3Q9UBP4 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
DKK3Q9UBP4 THAP12P9-201ENST00000503971 2360 ntBASIC6□□□□□ -1.45
DKK3Q9UBP4 HSPA8P14-201ENST00000552265 1805 ntBASIC6□□□□□ -1.45
DKK3Q9UBP4 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC6□□□□□ -1.45
DKK3Q9UBP4 RNA5SP211-201ENST00000365516 117 ntBASIC6□□□□□ -1.45
DKK3Q9UBP4 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
DKK3Q9UBP4 SNORA79B-201ENST00000410557 148 ntBASIC6□□□□□ -1.45
DKK3Q9UBP4 AL354890.1-201ENST00000413730 346 ntBASIC6□□□□□ -1.45
DKK3Q9UBP4 CDY17P-201ENST00000414121 1282 ntBASIC6□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms