Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 MORC1-202ENST00000483760 3056 ntAPPRIS ALT2 TSL 2 BASIC7.34□□□□□ -1.23
CUEDC1Q9NWM3 WASF5P-205ENST00000428639 1455 ntBASIC7.34□□□□□ -1.23
CUEDC1Q9NWM3 CYSLTR2-202ENST00000614739 1908 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
CUEDC1Q9NWM3 TRPM3-212ENST00000396283 3484 ntTSL 5 BASIC7.34□□□□□ -1.23
CUEDC1Q9NWM3 OR4F15-201ENST00000332238 2119 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
CUEDC1Q9NWM3 AC016747.1-201ENST00000420918 2532 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
CUEDC1Q9NWM3 LRRC28-201ENST00000301981 5971 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.24
CUEDC1Q9NWM3 FNDC7-201ENST00000370017 3332 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.24
CUEDC1Q9NWM3 AC068860.1-201ENST00000623701 3736 ntBASIC7.34□□□□□ -1.24
CUEDC1Q9NWM3 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
CUEDC1Q9NWM3 MTA3-201ENST00000405094 1785 ntTSL 5 BASIC7.33□□□□□ -1.24
CUEDC1Q9NWM3 OR7G2-202ENST00000641081 3015 ntAPPRIS ALT2 BASIC7.33□□□□□ -1.24
CUEDC1Q9NWM3 MAPK6PS3-201ENST00000403865 2162 ntBASIC7.33□□□□□ -1.24
CUEDC1Q9NWM3 KCNA2-214ENST00000640774 6673 ntTSL 5 BASIC7.33□□□□□ -1.24
CUEDC1Q9NWM3 ARHGEF12-201ENST00000356641 6891 ntTSL 5 BASIC7.33□□□□□ -1.24
CUEDC1Q9NWM3 PTK2-240ENST00000522684 4955 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
CUEDC1Q9NWM3 ZNF462-201ENST00000277225 10414 ntAPPRIS P2 TSL 1 (best) BASIC7.33□□□□□ -1.24
CUEDC1Q9NWM3 NPIPB9-202ENST00000550983 2123 ntAPPRIS P2 TSL 1 (best) BASIC7.33□□□□□ -1.24
CUEDC1Q9NWM3 ZNF106-201ENST00000263805 10460 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
CUEDC1Q9NWM3 YOD1-202ENST00000367084 6291 ntTSL 2 BASIC7.33□□□□□ -1.24
CUEDC1Q9NWM3 AC116366.3-205ENST00000640655 8032 ntAPPRIS ALT2 TSL 5 BASIC7.33□□□□□ -1.24
CUEDC1Q9NWM3 AC025040.2-201ENST00000558657 1852 ntBASIC7.33□□□□□ -1.24
CUEDC1Q9NWM3 PUM1-205ENST00000424085 4631 ntTSL 5 BASIC7.33□□□□□ -1.24
CUEDC1Q9NWM3 TTR-201ENST00000237014 957 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
CUEDC1Q9NWM3 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
CUEDC1Q9NWM3 Y_RNA.166-201ENST00000363730 102 ntBASIC7.33□□□□□ -1.24
CUEDC1Q9NWM3 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC7.33□□□□□ -1.24
CUEDC1Q9NWM3 RNU6-452P-201ENST00000384406 107 ntBASIC7.33□□□□□ -1.24
CUEDC1Q9NWM3 MIR137-201ENST00000385223 102 ntBASIC7.33□□□□□ -1.24
CUEDC1Q9NWM3 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
CUEDC1Q9NWM3 ZNF37CP-201ENST00000406795 241 ntBASIC7.33□□□□□ -1.24
CUEDC1Q9NWM3 AL512422.1-201ENST00000407033 553 ntBASIC7.33□□□□□ -1.24
CUEDC1Q9NWM3 RNU4-55P-201ENST00000410731 137 ntBASIC7.33□□□□□ -1.24
CUEDC1Q9NWM3 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC7.33□□□□□ -1.24
CUEDC1Q9NWM3 LINC01347-201ENST00000417964 355 ntBASIC7.33□□□□□ -1.24
CUEDC1Q9NWM3 EEF1A1P34-201ENST00000419888 1267 ntBASIC7.33□□□□□ -1.24
CUEDC1Q9NWM3 AL031584.2-201ENST00000420585 767 ntTSL 3 BASIC7.33□□□□□ -1.24
CUEDC1Q9NWM3 AC018630.2-202ENST00000422992 927 ntBASIC7.33□□□□□ -1.24
CUEDC1Q9NWM3 USP9YP36-201ENST00000424581 829 ntBASIC7.33□□□□□ -1.24
CUEDC1Q9NWM3 RPL7P44-201ENST00000424827 742 ntBASIC7.33□□□□□ -1.24
CUEDC1Q9NWM3 AC018644.1-201ENST00000429934 551 ntBASIC7.33□□□□□ -1.24
CUEDC1Q9NWM3 MTCO3P21-201ENST00000430791 643 ntBASIC7.33□□□□□ -1.24
CUEDC1Q9NWM3 RPL35P8-201ENST00000433284 337 ntBASIC7.33□□□□□ -1.24
CUEDC1Q9NWM3 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC7.33□□□□□ -1.24
CUEDC1Q9NWM3 RPS25P9-201ENST00000435591 252 ntBASIC7.33□□□□□ -1.24
CUEDC1Q9NWM3 UBE2FP3-201ENST00000436366 524 ntBASIC7.33□□□□□ -1.24
CUEDC1Q9NWM3 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC7.33□□□□□ -1.24
CUEDC1Q9NWM3 AC147651.1-201ENST00000453149 572 ntTSL 2 BASIC7.33□□□□□ -1.24
CUEDC1Q9NWM3 RPS18P13-201ENST00000461260 454 ntBASIC7.33□□□□□ -1.24
CUEDC1Q9NWM3 RN7SL55P-201ENST00000464534 297 ntBASIC7.33□□□□□ -1.24
CUEDC1Q9NWM3 RN7SL308P-201ENST00000464971 297 ntBASIC7.33□□□□□ -1.24
CUEDC1Q9NWM3 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC7.33□□□□□ -1.24
CUEDC1Q9NWM3 SYNPR-208ENST00000472899 527 ntTSL 4 BASIC7.33□□□□□ -1.24
CUEDC1Q9NWM3 CEACAMP3-202ENST00000483806 638 ntBASIC7.33□□□□□ -1.24
CUEDC1Q9NWM3 AC090013.1-201ENST00000485147 480 ntBASIC7.33□□□□□ -1.24
CUEDC1Q9NWM3 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC7.33□□□□□ -1.24
CUEDC1Q9NWM3 RPL39P36-201ENST00000490784 156 ntBASIC7.33□□□□□ -1.24
CUEDC1Q9NWM3 AC106822.1-201ENST00000502647 526 ntBASIC7.33□□□□□ -1.24
CUEDC1Q9NWM3 NPM1P27-201ENST00000502784 830 ntBASIC7.33□□□□□ -1.24
CUEDC1Q9NWM3 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC7.33□□□□□ -1.24
CUEDC1Q9NWM3 AC233724.10-201ENST00000510454 409 ntBASIC7.33□□□□□ -1.24
CUEDC1Q9NWM3 AC026700.1-201ENST00000512074 544 ntBASIC7.33□□□□□ -1.24
CUEDC1Q9NWM3 LINC01262-201ENST00000513681 879 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
CUEDC1Q9NWM3 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC7.33□□□□□ -1.24
CUEDC1Q9NWM3 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC7.33□□□□□ -1.24
CUEDC1Q9NWM3 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC7.33□□□□□ -1.24
CUEDC1Q9NWM3 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC7.33□□□□□ -1.24
CUEDC1Q9NWM3 OSBPL9P2-201ENST00000526582 1228 ntBASIC7.33□□□□□ -1.24
CUEDC1Q9NWM3 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC7.33□□□□□ -1.24
CUEDC1Q9NWM3 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
CUEDC1Q9NWM3 PSMB7P1-201ENST00000556349 514 ntBASIC7.33□□□□□ -1.24
CUEDC1Q9NWM3 STX8-209ENST00000574431 731 ntTSL 3 BASIC7.33□□□□□ -1.24
CUEDC1Q9NWM3 MIR4437-201ENST00000581331 60 ntBASIC7.33□□□□□ -1.24
CUEDC1Q9NWM3 AC011712.1-201ENST00000588959 234 ntBASIC7.33□□□□□ -1.24
CUEDC1Q9NWM3 AL021918.1-201ENST00000603933 236 ntBASIC7.33□□□□□ -1.24
CUEDC1Q9NWM3 AC004852.1-201ENST00000605206 154 ntBASIC7.33□□□□□ -1.24
CUEDC1Q9NWM3 AC073389.2-201ENST00000606726 571 ntTSL 4 BASIC7.33□□□□□ -1.24
CUEDC1Q9NWM3 AC105429.2-201ENST00000610567 517 ntBASIC7.33□□□□□ -1.24
CUEDC1Q9NWM3 CCL23-203ENST00000615050 624 ntAPPRIS P3 TSL 1 (best) BASIC7.33□□□□□ -1.24
CUEDC1Q9NWM3 AL356274.1-201ENST00000617064 410 ntBASIC7.33□□□□□ -1.24
CUEDC1Q9NWM3 AC108479.2-201ENST00000617314 601 ntBASIC7.33□□□□□ -1.24
CUEDC1Q9NWM3 AL158801.5-201ENST00000623123 465 ntBASIC7.33□□□□□ -1.24
CUEDC1Q9NWM3 AC011346.1-204ENST00000638089 1210 ntAPPRIS P5 TSL 3 BASIC7.33□□□□□ -1.24
CUEDC1Q9NWM3 BCAS3-234ENST00000639611 108 ntTSL 5 BASIC7.33□□□□□ -1.24
CUEDC1Q9NWM3 ZFX-204ENST00000379188 7513 ntTSL 5 BASIC7.33□□□□□ -1.24
CUEDC1Q9NWM3 CLCN3-209ENST00000513761 6692 ntAPPRIS ALT1 TSL 1 (best) BASIC7.33□□□□□ -1.24
CUEDC1Q9NWM3 HLF-210ENST00000575345 3589 ntTSL 2 BASIC7.33□□□□□ -1.24
CUEDC1Q9NWM3 ZNF385B-202ENST00000409343 2750 ntTSL 2 BASIC7.33□□□□□ -1.24
CUEDC1Q9NWM3 KRBOX1-202ENST00000418176 2566 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
CUEDC1Q9NWM3 SYCP1-202ENST00000369522 3522 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
CUEDC1Q9NWM3 KIF15-201ENST00000326047 4842 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
CUEDC1Q9NWM3 LRRC37A9P-201ENST00000603850 5376 ntBASIC7.33□□□□□ -1.24
CUEDC1Q9NWM3 NFAT5-201ENST00000349945 13362 ntAPPRIS ALT1 TSL 1 (best) BASIC7.33□□□□□ -1.24
CUEDC1Q9NWM3 AL353795.1-201ENST00000439134 1775 ntBASIC7.33□□□□□ -1.24
CUEDC1Q9NWM3 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC7.33□□□□□ -1.24
CUEDC1Q9NWM3 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
CUEDC1Q9NWM3 ANAPC5-204ENST00000441917 2147 ntTSL 5 BASIC7.33□□□□□ -1.24
CUEDC1Q9NWM3 OLR1-201ENST00000309539 2462 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
CUEDC1Q9NWM3 ADA2-202ENST00000330232 3195 ntTSL 2 BASIC7.32□□□□□ -1.24
CUEDC1Q9NWM3 TRIM5-203ENST00000396847 3170 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms