Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
SIX2Q9NPC8 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SIX2Q9NPC8 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SIX2Q9NPC8 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
SIX2Q9NPC8 NAT1-210ENST00000545197 1827 ntTSL 5 BASIC5.6□□□□□ -1.51
SIX2Q9NPC8 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC5.6□□□□□ -1.51
SIX2Q9NPC8 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
SIX2Q9NPC8 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
SIX2Q9NPC8 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SIX2Q9NPC8 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
SIX2Q9NPC8 OR56A4-201ENST00000330728 1209 ntBASIC5.6□□□□□ -1.51
SIX2Q9NPC8 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SIX2Q9NPC8 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
SIX2Q9NPC8 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SIX2Q9NPC8 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
SIX2Q9NPC8 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
SIX2Q9NPC8 RPL35AP24-201ENST00000413846 330 ntBASIC5.6□□□□□ -1.51
SIX2Q9NPC8 AL513325.1-201ENST00000417716 1034 ntBASIC5.6□□□□□ -1.51
SIX2Q9NPC8 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC5.6□□□□□ -1.51
SIX2Q9NPC8 HMGB1P32-201ENST00000425971 565 ntBASIC5.6□□□□□ -1.51
SIX2Q9NPC8 RPS4XP16-201ENST00000427198 791 ntBASIC5.6□□□□□ -1.51
SIX2Q9NPC8 AC002069.1-201ENST00000429649 1159 ntBASIC5.6□□□□□ -1.51
SIX2Q9NPC8 AC009238.2-201ENST00000431026 355 ntBASIC5.6□□□□□ -1.51
SIX2Q9NPC8 BTBD7P2-201ENST00000441962 620 ntBASIC5.6□□□□□ -1.51
SIX2Q9NPC8 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
SIX2Q9NPC8 AC011225.1-201ENST00000457751 369 ntBASIC5.6□□□□□ -1.51
SIX2Q9NPC8 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
SIX2Q9NPC8 RPL7P40-201ENST00000481703 745 ntBASIC5.6□□□□□ -1.51
SIX2Q9NPC8 UBA52P7-201ENST00000486088 380 ntBASIC5.6□□□□□ -1.51
SIX2Q9NPC8 AC005412.2-201ENST00000492004 341 ntBASIC5.6□□□□□ -1.51
SIX2Q9NPC8 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC5.6□□□□□ -1.51
SIX2Q9NPC8 AC097173.1-201ENST00000505862 819 ntBASIC5.6□□□□□ -1.51
SIX2Q9NPC8 PGAM1P13-201ENST00000507497 754 ntBASIC5.6□□□□□ -1.51
SIX2Q9NPC8 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SIX2Q9NPC8 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC5.6□□□□□ -1.51
SIX2Q9NPC8 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC5.6□□□□□ -1.51
SIX2Q9NPC8 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC5.6□□□□□ -1.51
SIX2Q9NPC8 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SIX2Q9NPC8 AC109309.2-201ENST00000612597 332 ntBASIC5.6□□□□□ -1.51
SIX2Q9NPC8 WBP1LP8-201ENST00000617401 327 ntBASIC5.6□□□□□ -1.51
SIX2Q9NPC8 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC5.6□□□□□ -1.51
SIX2Q9NPC8 AC090527.3-201ENST00000619041 548 ntBASIC5.6□□□□□ -1.51
SIX2Q9NPC8 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC5.6□□□□□ -1.51
SIX2Q9NPC8 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC5.6□□□□□ -1.51
SIX2Q9NPC8 RFC1-217ENST00000639695 867 ntTSL 5 BASIC5.6□□□□□ -1.51
SIX2Q9NPC8 OR56A4-203ENST00000641279 1209 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
SIX2Q9NPC8 AC114947.2-201ENST00000565748 2125 ntBASIC5.6□□□□□ -1.51
SIX2Q9NPC8 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC5.6□□□□□ -1.51
SIX2Q9NPC8 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.6□□□□□ -1.51
SIX2Q9NPC8 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.6□□□□□ -1.51
SIX2Q9NPC8 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC5.59□□□□□ -1.51
SIX2Q9NPC8 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
SIX2Q9NPC8 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
SIX2Q9NPC8 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
SIX2Q9NPC8 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
SIX2Q9NPC8 CR383656.5-201ENST00000547616 1340 ntBASIC5.59□□□□□ -1.51
SIX2Q9NPC8 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
SIX2Q9NPC8 YES1-203ENST00000577961 4554 ntTSL 5 BASIC5.59□□□□□ -1.51
SIX2Q9NPC8 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
SIX2Q9NPC8 RNA5SP223-201ENST00000365174 120 ntBASIC5.59□□□□□ -1.51
SIX2Q9NPC8 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
SIX2Q9NPC8 MTND3P20-201ENST00000407663 186 ntBASIC5.59□□□□□ -1.51
SIX2Q9NPC8 AL358178.1-201ENST00000407698 397 ntBASIC5.59□□□□□ -1.51
SIX2Q9NPC8 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC5.59□□□□□ -1.51
SIX2Q9NPC8 AL161722.2-201ENST00000434731 981 ntBASIC5.59□□□□□ -1.51
SIX2Q9NPC8 PCNPP2-201ENST00000441651 455 ntBASIC5.59□□□□□ -1.51
SIX2Q9NPC8 HNRNPDLP2-201ENST00000455248 751 ntBASIC5.59□□□□□ -1.51
SIX2Q9NPC8 EIF3LP3-201ENST00000495197 822 ntBASIC5.59□□□□□ -1.51
SIX2Q9NPC8 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC5.59□□□□□ -1.51
SIX2Q9NPC8 IGKV3D-34-201ENST00000522638 302 ntBASIC5.59□□□□□ -1.51
SIX2Q9NPC8 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
SIX2Q9NPC8 OCLM-201ENST00000574641 884 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
SIX2Q9NPC8 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC5.59□□□□□ -1.51
SIX2Q9NPC8 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC5.59□□□□□ -1.51
SIX2Q9NPC8 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC5.59□□□□□ -1.51
SIX2Q9NPC8 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
SIX2Q9NPC8 AC073869.10-201ENST00000642016 354 ntBASIC5.59□□□□□ -1.51
SIX2Q9NPC8 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
SIX2Q9NPC8 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.59□□□□□ -1.51
SIX2Q9NPC8 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
SIX2Q9NPC8 METTL21EP-202ENST00000605100 2312 ntTSL 2 BASIC5.59□□□□□ -1.51
SIX2Q9NPC8 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC5.59□□□□□ -1.52
SIX2Q9NPC8 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
SIX2Q9NPC8 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.52
SIX2Q9NPC8 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SIX2Q9NPC8 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SIX2Q9NPC8 EEF1A1P14-201ENST00000421195 1376 ntBASIC5.58□□□□□ -1.52
SIX2Q9NPC8 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SIX2Q9NPC8 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC5.58□□□□□ -1.52
SIX2Q9NPC8 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SIX2Q9NPC8 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SIX2Q9NPC8 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SIX2Q9NPC8 OR8V1P-201ENST00000395193 873 ntBASIC5.58□□□□□ -1.52
SIX2Q9NPC8 OOSP1-201ENST00000398992 1270 ntBASIC5.58□□□□□ -1.52
SIX2Q9NPC8 NUDT19P3-201ENST00000404698 555 ntBASIC5.58□□□□□ -1.52
SIX2Q9NPC8 MIR1182-201ENST00000408363 97 ntBASIC5.58□□□□□ -1.52
SIX2Q9NPC8 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC5.58□□□□□ -1.52
SIX2Q9NPC8 HMGN2P27-201ENST00000427352 270 ntBASIC5.58□□□□□ -1.52
SIX2Q9NPC8 BX119904.3-201ENST00000428194 957 ntBASIC5.58□□□□□ -1.52
SIX2Q9NPC8 FAM96AP1-201ENST00000430879 482 ntBASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms