Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 MIR4505-201ENST00000582238 73 ntBASIC5.65□□□□□ -1.5
PCDH9Q9HC56 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC5.65□□□□□ -1.5
PCDH9Q9HC56 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
PCDH9Q9HC56 AC015802.5-201ENST00000607478 399 ntBASIC5.65□□□□□ -1.5
PCDH9Q9HC56 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC5.65□□□□□ -1.5
PCDH9Q9HC56 AC096586.2-201ENST00000610260 441 ntBASIC5.65□□□□□ -1.5
PCDH9Q9HC56 RN7SL787P-201ENST00000613000 284 ntBASIC5.65□□□□□ -1.5
PCDH9Q9HC56 AL162233.1-201ENST00000620014 944 ntBASIC5.65□□□□□ -1.5
PCDH9Q9HC56 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC5.65□□□□□ -1.5
PCDH9Q9HC56 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC5.65□□□□□ -1.5
PCDH9Q9HC56 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC5.65□□□□□ -1.51
PCDH9Q9HC56 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.51
PCDH9Q9HC56 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
PCDH9Q9HC56 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
PCDH9Q9HC56 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
PCDH9Q9HC56 CASC19-255ENST00000641733 1385 ntBASIC5.65□□□□□ -1.51
PCDH9Q9HC56 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.51
PCDH9Q9HC56 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC5.65□□□□□ -1.51
PCDH9Q9HC56 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.65□□□□□ -1.51
PCDH9Q9HC56 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.65□□□□□ -1.51
PCDH9Q9HC56 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
PCDH9Q9HC56 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.64□□□□□ -1.51
PCDH9Q9HC56 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
PCDH9Q9HC56 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
PCDH9Q9HC56 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC5.64□□□□□ -1.51
PCDH9Q9HC56 AC092376.2-201ENST00000622621 4116 ntBASIC5.64□□□□□ -1.51
PCDH9Q9HC56 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
PCDH9Q9HC56 AC024341.1-201ENST00000526444 1552 ntBASIC5.64□□□□□ -1.51
PCDH9Q9HC56 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC5.64□□□□□ -1.51
PCDH9Q9HC56 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
PCDH9Q9HC56 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
PCDH9Q9HC56 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC5.64□□□□□ -1.51
PCDH9Q9HC56 SNORA48.4-201ENST00000391089 134 ntBASIC5.64□□□□□ -1.51
PCDH9Q9HC56 GAPDHP42-201ENST00000406848 981 ntBASIC5.64□□□□□ -1.51
PCDH9Q9HC56 RN7SKP286-201ENST00000410894 299 ntBASIC5.64□□□□□ -1.51
PCDH9Q9HC56 CBX1P3-201ENST00000413296 527 ntBASIC5.64□□□□□ -1.51
PCDH9Q9HC56 AL596448.1-201ENST00000415024 392 ntBASIC5.64□□□□□ -1.51
PCDH9Q9HC56 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
PCDH9Q9HC56 AL133173.1-201ENST00000423458 397 ntBASIC5.64□□□□□ -1.51
PCDH9Q9HC56 CR848007.2-201ENST00000424918 787 ntBASIC5.64□□□□□ -1.51
PCDH9Q9HC56 NDUFA5P1-201ENST00000433858 341 ntBASIC5.64□□□□□ -1.51
PCDH9Q9HC56 FMO7P-201ENST00000436045 768 ntBASIC5.64□□□□□ -1.51
PCDH9Q9HC56 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC5.64□□□□□ -1.51
PCDH9Q9HC56 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
PCDH9Q9HC56 THAP12P8-201ENST00000447914 2115 ntBASIC5.64□□□□□ -1.51
PCDH9Q9HC56 AC090804.1-201ENST00000448870 490 ntBASIC5.64□□□□□ -1.51
PCDH9Q9HC56 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC5.64□□□□□ -1.51
PCDH9Q9HC56 RN7SL72P-201ENST00000460697 269 ntBASIC5.64□□□□□ -1.51
PCDH9Q9HC56 OR2A3P-201ENST00000493774 953 ntBASIC5.64□□□□□ -1.51
PCDH9Q9HC56 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC5.64□□□□□ -1.51
PCDH9Q9HC56 CDC42P3-201ENST00000518493 633 ntBASIC5.64□□□□□ -1.51
PCDH9Q9HC56 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC5.64□□□□□ -1.51
PCDH9Q9HC56 MRPS21P7-201ENST00000566937 238 ntBASIC5.64□□□□□ -1.51
PCDH9Q9HC56 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC5.64□□□□□ -1.51
PCDH9Q9HC56 RBM22P12-201ENST00000567098 1255 ntBASIC5.64□□□□□ -1.51
PCDH9Q9HC56 AC019322.1-201ENST00000571869 389 ntBASIC5.64□□□□□ -1.51
PCDH9Q9HC56 VN1R81P-201ENST00000602085 372 ntBASIC5.64□□□□□ -1.51
PCDH9Q9HC56 XIST-210ENST00000602863 775 ntTSL 3 BASIC5.64□□□□□ -1.51
PCDH9Q9HC56 AC144521.1-201ENST00000607148 956 ntBASIC5.64□□□□□ -1.51
PCDH9Q9HC56 RNU6-84P-201ENST00000607737 102 ntBASIC5.64□□□□□ -1.51
PCDH9Q9HC56 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC5.64□□□□□ -1.51
PCDH9Q9HC56 AC126175.1-201ENST00000617041 758 ntBASIC5.64□□□□□ -1.51
PCDH9Q9HC56 AC026367.3-201ENST00000619032 590 ntBASIC5.64□□□□□ -1.51
PCDH9Q9HC56 AC026124.2-201ENST00000621847 656 ntBASIC5.64□□□□□ -1.51
PCDH9Q9HC56 CU639417.4-201ENST00000623928 207 ntBASIC5.64□□□□□ -1.51
PCDH9Q9HC56 AC007683.2-201ENST00000624681 714 ntBASIC5.64□□□□□ -1.51
PCDH9Q9HC56 AC103703.1-201ENST00000634783 663 ntBASIC5.64□□□□□ -1.51
PCDH9Q9HC56 AC073869.8-201ENST00000641806 335 ntBASIC5.64□□□□□ -1.51
PCDH9Q9HC56 AC008691.1-209ENST00000642094 814 ntBASIC5.64□□□□□ -1.51
PCDH9Q9HC56 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
PCDH9Q9HC56 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
PCDH9Q9HC56 GVINP1-202ENST00000531871 7271 ntBASIC5.64□□□□□ -1.51
PCDH9Q9HC56 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
PCDH9Q9HC56 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
PCDH9Q9HC56 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
PCDH9Q9HC56 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
PCDH9Q9HC56 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
PCDH9Q9HC56 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
PCDH9Q9HC56 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.63□□□□□ -1.51
PCDH9Q9HC56 AC003973.3-201ENST00000624863 2822 ntBASIC5.63□□□□□ -1.51
PCDH9Q9HC56 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
PCDH9Q9HC56 AC068870.3-201ENST00000625077 2536 ntBASIC5.63□□□□□ -1.51
PCDH9Q9HC56 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
PCDH9Q9HC56 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
PCDH9Q9HC56 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
PCDH9Q9HC56 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
PCDH9Q9HC56 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC5.63□□□□□ -1.51
PCDH9Q9HC56 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
PCDH9Q9HC56 U3.23-201ENST00000391132 200 ntBASIC5.63□□□□□ -1.51
PCDH9Q9HC56 NPM1P37-201ENST00000403105 874 ntBASIC5.63□□□□□ -1.51
PCDH9Q9HC56 AL589994.1-201ENST00000404962 340 ntBASIC5.63□□□□□ -1.51
PCDH9Q9HC56 AL589655.1-201ENST00000405398 482 ntBASIC5.63□□□□□ -1.51
PCDH9Q9HC56 AL139039.2-201ENST00000407436 479 ntBASIC5.63□□□□□ -1.51
PCDH9Q9HC56 OR6E1P-201ENST00000414424 923 ntBASIC5.63□□□□□ -1.51
PCDH9Q9HC56 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
PCDH9Q9HC56 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC5.63□□□□□ -1.51
PCDH9Q9HC56 AC017019.1-201ENST00000426129 261 ntBASIC5.63□□□□□ -1.51
PCDH9Q9HC56 HSPD1P12-201ENST00000429127 1069 ntBASIC5.63□□□□□ -1.51
PCDH9Q9HC56 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
PCDH9Q9HC56 FTLP19-201ENST00000433300 394 ntBASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 129 ms