Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC2.11□□□□□ -2.07
LCE3DQ9BYE3 U1.31-201ENST00000620022 160 ntBASIC2.11□□□□□ -2.07
LCE3DQ9BYE3 AC126915.3-201ENST00000620111 208 ntBASIC2.11□□□□□ -2.07
LCE3DQ9BYE3 MED15P6-202ENST00000621415 787 ntBASIC2.11□□□□□ -2.07
LCE3DQ9BYE3 AC110769.3-201ENST00000624567 1173 ntBASIC2.11□□□□□ -2.07
LCE3DQ9BYE3 LINC01206-231ENST00000629026 858 ntTSL 5 BASIC2.11□□□□□ -2.07
LCE3DQ9BYE3 AL138924.1-201ENST00000629067 415 ntTSL 3 BASIC2.11□□□□□ -2.07
LCE3DQ9BYE3 AC108724.2-201ENST00000634593 290 ntBASIC2.11□□□□□ -2.07
LCE3DQ9BYE3 AC108477.1-201ENST00000636764 526 ntTSL 4 BASIC2.11□□□□□ -2.07
LCE3DQ9BYE3 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
LCE3DQ9BYE3 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
LCE3DQ9BYE3 MFSD8-217ENST00000641178 4374 ntBASIC2.11□□□□□ -2.07
LCE3DQ9BYE3 IFT46-201ENST00000264020 1819 ntTSL 2 BASIC2.11□□□□□ -2.07
LCE3DQ9BYE3 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
LCE3DQ9BYE3 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC2.11□□□□□ -2.07
LCE3DQ9BYE3 LDAH-201ENST00000237822 2907 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
LCE3DQ9BYE3 BEST3-212ENST00000553096 2929 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
LCE3DQ9BYE3 OAS2-207ENST00000620097 2908 ntAPPRIS ALT2 TSL 5 BASIC2.11□□□□□ -2.07
LCE3DQ9BYE3 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC2.11□□□□□ -2.07
LCE3DQ9BYE3 MEF2C-210ENST00000506554 3469 ntTSL 5 BASIC2.11□□□□□ -2.07
LCE3DQ9BYE3 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC2.11□□□□□ -2.07
LCE3DQ9BYE3 LINC00598-208ENST00000617777 2551 ntTSL 2 BASIC2.11□□□□□ -2.07
LCE3DQ9BYE3 GTF2IP1-202ENST00000614592 2047 ntBASIC2.11□□□□□ -2.07
LCE3DQ9BYE3 PCBP2-207ENST00000546463 1457 ntAPPRIS P3 TSL 1 (best) BASIC2.11□□□□□ -2.07
LCE3DQ9BYE3 AC108463.3-201ENST00000603748 1482 ntBASIC2.11□□□□□ -2.07
LCE3DQ9BYE3 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC2.11□□□□□ -2.07
LCE3DQ9BYE3 EYA3-204ENST00000436342 5943 ntTSL 2 BASIC2.11□□□□□ -2.07
LCE3DQ9BYE3 NDRG3-204ENST00000373803 2978 ntTSL 5 BASIC2.11□□□□□ -2.07
LCE3DQ9BYE3 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.11□□□□□ -2.07
LCE3DQ9BYE3 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
LCE3DQ9BYE3 LINC02511-201ENST00000505736 1668 ntTSL 5 BASIC2.11□□□□□ -2.07
LCE3DQ9BYE3 AC134882.1-201ENST00000603738 1676 ntBASIC2.11□□□□□ -2.07
LCE3DQ9BYE3 PIWIL4-201ENST00000299001 3199 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
LCE3DQ9BYE3 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC2.11□□□□□ -2.07
LCE3DQ9BYE3 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC2.11□□□□□ -2.07
LCE3DQ9BYE3 ZNF430-201ENST00000261560 3923 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
LCE3DQ9BYE3 PARP2-201ENST00000250416 1886 ntAPPRIS P3 TSL 1 (best) BASIC2.11□□□□□ -2.07
LCE3DQ9BYE3 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC2.11□□□□□ -2.07
LCE3DQ9BYE3 CNIH4-205ENST00000465271 4125 ntAPPRIS P3 TSL 1 (best) BASIC2.11□□□□□ -2.07
LCE3DQ9BYE3 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
LCE3DQ9BYE3 ERI2-215ENST00000569729 2646 ntTSL 2 BASIC2.11□□□□□ -2.07
LCE3DQ9BYE3 CD160-205ENST00000616463 3388 ntAPPRIS ALT2 TSL 2 BASIC2.11□□□□□ -2.07
LCE3DQ9BYE3 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
LCE3DQ9BYE3 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC2.11□□□□□ -2.07
LCE3DQ9BYE3 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC2.11□□□□□ -2.07
LCE3DQ9BYE3 TBC1D23-205ENST00000475134 2074 ntTSL 5 BASIC2.11□□□□□ -2.07
LCE3DQ9BYE3 IL1RL1-202ENST00000311734 3994 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
LCE3DQ9BYE3 PCDH18-205ENST00000511115 1331 ntTSL 2 BASIC2.11□□□□□ -2.07
LCE3DQ9BYE3 ACTR3BP2-202ENST00000623630 1338 ntBASIC2.11□□□□□ -2.07
LCE3DQ9BYE3 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC2.11□□□□□ -2.07
LCE3DQ9BYE3 LDB2-216ENST00000515064 2295 ntAPPRIS ALT1 TSL 2 BASIC2.11□□□□□ -2.07
LCE3DQ9BYE3 UTP4-204ENST00000563094 4183 ntTSL 2 BASIC2.11□□□□□ -2.07
LCE3DQ9BYE3 CFAP57-208ENST00000610710 4162 ntTSL 5 BASIC2.11□□□□□ -2.07
LCE3DQ9BYE3 CCT4P2-201ENST00000233836 1548 ntBASIC2.11□□□□□ -2.07
LCE3DQ9BYE3 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC2.11□□□□□ -2.07
LCE3DQ9BYE3 WDR95P-201ENST00000425638 1542 ntBASIC2.11□□□□□ -2.07
LCE3DQ9BYE3 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
LCE3DQ9BYE3 OLFM4-201ENST00000219022 2897 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
LCE3DQ9BYE3 GLYAT-202ENST00000344743 1735 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
LCE3DQ9BYE3 ZCWPW2-201ENST00000383768 1716 ntAPPRIS P2 TSL 1 (best) BASIC2.11□□□□□ -2.07
LCE3DQ9BYE3 USP9YP4-201ENST00000424401 1745 ntBASIC2.11□□□□□ -2.07
LCE3DQ9BYE3 LINC01095-202ENST00000507726 1715 ntTSL 2 BASIC2.11□□□□□ -2.07
LCE3DQ9BYE3 C8orf34-208ENST00000523686 1948 ntAPPRIS ALT2 TSL 2 BASIC2.11□□□□□ -2.07
LCE3DQ9BYE3 AL671511.1-201ENST00000425033 3458 ntTSL 2 BASIC2.11□□□□□ -2.07
LCE3DQ9BYE3 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
LCE3DQ9BYE3 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC2.11□□□□□ -2.07
LCE3DQ9BYE3 PLP1-220ENST00000612423 3132 ntAPPRIS P1 TSL 2 BASIC2.11□□□□□ -2.07
LCE3DQ9BYE3 MAPK10-380ENST00000642015 3137 ntAPPRIS P2 BASIC2.11□□□□□ -2.07
LCE3DQ9BYE3 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC2.11□□□□□ -2.07
LCE3DQ9BYE3 MEIS1-202ENST00000398506 3530 ntTSL 5 BASIC2.11□□□□□ -2.07
LCE3DQ9BYE3 LDAH-209ENST00000440866 3728 ntTSL 2 BASIC2.11□□□□□ -2.07
LCE3DQ9BYE3 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
LCE3DQ9BYE3 EEF1A1P22-201ENST00000559385 1380 ntBASIC2.1□□□□□ -2.07
LCE3DQ9BYE3 CASC19-221ENST00000641309 1382 ntBASIC2.1□□□□□ -2.07
LCE3DQ9BYE3 MEF2C-226ENST00000625674 4343 ntAPPRIS P3 TSL 5 BASIC2.1□□□□□ -2.07
LCE3DQ9BYE3 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
LCE3DQ9BYE3 ASNS-214ENST00000455086 1588 ntTSL 2 BASIC2.1□□□□□ -2.07
LCE3DQ9BYE3 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC2.1□□□□□ -2.07
LCE3DQ9BYE3 MFSD4BP1-201ENST00000513330 1552 ntBASIC2.1□□□□□ -2.07
LCE3DQ9BYE3 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
LCE3DQ9BYE3 LINC00269-201ENST00000399711 2173 ntTSL 2 BASIC2.1□□□□□ -2.07
LCE3DQ9BYE3 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC2.1□□□□□ -2.07
LCE3DQ9BYE3 VN1R1-201ENST00000321039 2353 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
LCE3DQ9BYE3 FHL1-204ENST00000370683 2565 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
LCE3DQ9BYE3 SORBS1-209ENST00000371245 2779 ntAPPRIS ALT2 TSL 1 (best) BASIC2.1□□□□□ -2.07
LCE3DQ9BYE3 HABP2-203ENST00000542051 2972 ntAPPRIS ALT2 TSL 2 BASIC2.1□□□□□ -2.07
LCE3DQ9BYE3 OR9M1P-202ENST00000641564 3163 ntBASIC2.1□□□□□ -2.07
LCE3DQ9BYE3 SAGE4P-201ENST00000442271 3381 ntBASIC2.1□□□□□ -2.07
LCE3DQ9BYE3 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
LCE3DQ9BYE3 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC2.1□□□□□ -2.07
LCE3DQ9BYE3 GTF2E1-201ENST00000283875 3012 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
LCE3DQ9BYE3 THADA-205ENST00000404790 3043 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
LCE3DQ9BYE3 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
LCE3DQ9BYE3 MAPK10-296ENST00000641283 2826 ntAPPRIS P2 BASIC2.1□□□□□ -2.07
LCE3DQ9BYE3 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC2.1□□□□□ -2.07
LCE3DQ9BYE3 THAP12P1-201ENST00000398672 2203 ntBASIC2.1□□□□□ -2.07
LCE3DQ9BYE3 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
LCE3DQ9BYE3 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
LCE3DQ9BYE3 TRIM60P14-201ENST00000513444 1419 ntBASIC2.1□□□□□ -2.07
LCE3DQ9BYE3 C11orf54-207ENST00000528288 4094 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 129.7 ms