Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC7.89□□□□□ -1.15
SCAPERQ9BY12 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC7.89□□□□□ -1.15
SCAPERQ9BY12 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC7.89□□□□□ -1.15
SCAPERQ9BY12 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC7.89□□□□□ -1.15
SCAPERQ9BY12 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC7.89□□□□□ -1.15
SCAPERQ9BY12 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC7.89□□□□□ -1.15
SCAPERQ9BY12 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
SCAPERQ9BY12 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC7.89□□□□□ -1.15
SCAPERQ9BY12 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC7.89□□□□□ -1.15
SCAPERQ9BY12 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC7.89□□□□□ -1.15
SCAPERQ9BY12 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
SCAPERQ9BY12 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
SCAPERQ9BY12 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
SCAPERQ9BY12 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC7.89□□□□□ -1.15
SCAPERQ9BY12 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
SCAPERQ9BY12 AL158152.1-201ENST00000602652 1435 ntBASIC7.89□□□□□ -1.15
SCAPERQ9BY12 AC034229.2-201ENST00000566945 2508 ntBASIC7.88□□□□□ -1.15
SCAPERQ9BY12 POLR1A-201ENST00000263857 12749 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
SCAPERQ9BY12 BX284613.1-201ENST00000452221 1641 ntBASIC7.88□□□□□ -1.15
SCAPERQ9BY12 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC7.88□□□□□ -1.15
SCAPERQ9BY12 CNOT4-205ENST00000423368 3297 ntAPPRIS ALT1 TSL 1 (best) BASIC7.88□□□□□ -1.15
SCAPERQ9BY12 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC7.88□□□□□ -1.15
SCAPERQ9BY12 RN7SKP100-201ENST00000411258 284 ntBASIC7.88□□□□□ -1.15
SCAPERQ9BY12 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC7.88□□□□□ -1.15
SCAPERQ9BY12 AC007559.1-201ENST00000428736 355 ntBASIC7.88□□□□□ -1.15
SCAPERQ9BY12 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC7.88□□□□□ -1.15
SCAPERQ9BY12 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC7.88□□□□□ -1.15
SCAPERQ9BY12 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
SCAPERQ9BY12 AC093720.1-201ENST00000505681 714 ntBASIC7.88□□□□□ -1.15
SCAPERQ9BY12 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC7.88□□□□□ -1.15
SCAPERQ9BY12 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC7.88□□□□□ -1.15
SCAPERQ9BY12 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC7.88□□□□□ -1.15
SCAPERQ9BY12 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC7.88□□□□□ -1.15
SCAPERQ9BY12 AP005432.2-201ENST00000608162 586 ntBASIC7.88□□□□□ -1.15
SCAPERQ9BY12 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC7.88□□□□□ -1.15
SCAPERQ9BY12 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC7.88□□□□□ -1.15
SCAPERQ9BY12 MARCH6-201ENST00000274140 9569 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
SCAPERQ9BY12 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
SCAPERQ9BY12 Z98755.1-201ENST00000407015 1384 ntBASIC7.88□□□□□ -1.15
SCAPERQ9BY12 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC7.88□□□□□ -1.15
SCAPERQ9BY12 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
SCAPERQ9BY12 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC7.88□□□□□ -1.15
SCAPERQ9BY12 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC7.88□□□□□ -1.15
SCAPERQ9BY12 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC7.88□□□□□ -1.15
SCAPERQ9BY12 RORA-203ENST00000335670 10844 ntAPPRIS P3 TSL 1 (best) BASIC7.88□□□□□ -1.15
SCAPERQ9BY12 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
SCAPERQ9BY12 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC7.88□□□□□ -1.15
SCAPERQ9BY12 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC7.88□□□□□ -1.15
SCAPERQ9BY12 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC7.88□□□□□ -1.15
SCAPERQ9BY12 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
SCAPERQ9BY12 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC7.88□□□□□ -1.15
SCAPERQ9BY12 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC7.88□□□□□ -1.15
SCAPERQ9BY12 AL022323.4-201ENST00000623980 13120 ntBASIC7.88□□□□□ -1.15
SCAPERQ9BY12 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC7.88□□□□□ -1.15
SCAPERQ9BY12 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
SCAPERQ9BY12 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
SCAPERQ9BY12 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
SCAPERQ9BY12 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
SCAPERQ9BY12 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
SCAPERQ9BY12 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
SCAPERQ9BY12 FAM3C2-201ENST00000312214 681 ntBASIC7.87□□□□□ -1.15
SCAPERQ9BY12 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
SCAPERQ9BY12 AL359265.2-201ENST00000434367 631 ntBASIC7.87□□□□□ -1.15
SCAPERQ9BY12 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC7.87□□□□□ -1.15
SCAPERQ9BY12 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC7.87□□□□□ -1.15
SCAPERQ9BY12 RBMY2TP-201ENST00000451162 947 ntBASIC7.87□□□□□ -1.15
SCAPERQ9BY12 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC7.87□□□□□ -1.15
SCAPERQ9BY12 RN7SL188P-201ENST00000469842 285 ntBASIC7.87□□□□□ -1.15
SCAPERQ9BY12 AC020898.1-201ENST00000474167 787 ntBASIC7.87□□□□□ -1.15
SCAPERQ9BY12 GAPDHP56-201ENST00000506031 988 ntBASIC7.87□□□□□ -1.15
SCAPERQ9BY12 MRPS33P2-201ENST00000507850 322 ntBASIC7.87□□□□□ -1.15
SCAPERQ9BY12 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC7.87□□□□□ -1.15
SCAPERQ9BY12 RGS5-219ENST00000528019 512 ntTSL 4 BASIC7.87□□□□□ -1.15
SCAPERQ9BY12 MIR4284-201ENST00000578924 81 ntBASIC7.87□□□□□ -1.15
SCAPERQ9BY12 AC020910.2-201ENST00000603635 610 ntBASIC7.87□□□□□ -1.15
SCAPERQ9BY12 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
SCAPERQ9BY12 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC7.87□□□□□ -1.15
SCAPERQ9BY12 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC7.87□□□□□ -1.15
SCAPERQ9BY12 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC7.87□□□□□ -1.15
SCAPERQ9BY12 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
SCAPERQ9BY12 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
SCAPERQ9BY12 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC7.87□□□□□ -1.15
SCAPERQ9BY12 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
SCAPERQ9BY12 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
SCAPERQ9BY12 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC7.87□□□□□ -1.15
SCAPERQ9BY12 BDNF-217ENST00000533131 3878 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
SCAPERQ9BY12 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
SCAPERQ9BY12 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC7.86□□□□□ -1.15
SCAPERQ9BY12 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC7.86□□□□□ -1.15
SCAPERQ9BY12 AL157938.2-207ENST00000415391 884 ntTSL 2 BASIC7.86□□□□□ -1.15
SCAPERQ9BY12 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC7.86□□□□□ -1.15
SCAPERQ9BY12 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC7.86□□□□□ -1.15
SCAPERQ9BY12 AC006967.1-201ENST00000467608 589 ntBASIC7.86□□□□□ -1.15
SCAPERQ9BY12 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC7.86□□□□□ -1.15
SCAPERQ9BY12 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC7.86□□□□□ -1.15
SCAPERQ9BY12 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC7.86□□□□□ -1.15
SCAPERQ9BY12 RPL26P30-202ENST00000602923 645 ntBASIC7.86□□□□□ -1.15
SCAPERQ9BY12 AC105254.2-201ENST00000603636 436 ntBASIC7.86□□□□□ -1.15
SCAPERQ9BY12 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC7.86□□□□□ -1.15
SCAPERQ9BY12 STK3-216ENST00000523601 3107 ntTSL 2 BASIC7.86□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 72.3 ms