Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
VPS33AQ96AX1 RMST-202ENST00000541282 2099 ntTSL 2 BASIC5.39□□□□□ -1.55
VPS33AQ96AX1 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.39□□□□□ -1.55
VPS33AQ96AX1 DYNC2LI1-201ENST00000260605 1399 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
VPS33AQ96AX1 SULT1C2-205ENST00000437390 1359 ntTSL 2 BASIC5.39□□□□□ -1.55
VPS33AQ96AX1 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
VPS33AQ96AX1 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
VPS33AQ96AX1 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
VPS33AQ96AX1 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
VPS33AQ96AX1 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
VPS33AQ96AX1 AC027088.4-201ENST00000611559 1947 ntBASIC5.38□□□□□ -1.55
VPS33AQ96AX1 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC5.38□□□□□ -1.55
VPS33AQ96AX1 PWAR1-201ENST00000624188 2414 ntBASIC5.38□□□□□ -1.55
VPS33AQ96AX1 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC5.38□□□□□ -1.55
VPS33AQ96AX1 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
VPS33AQ96AX1 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
VPS33AQ96AX1 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
VPS33AQ96AX1 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
VPS33AQ96AX1 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.38□□□□□ -1.55
VPS33AQ96AX1 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC5.38□□□□□ -1.55
VPS33AQ96AX1 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
VPS33AQ96AX1 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
VPS33AQ96AX1 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
VPS33AQ96AX1 MUC2-202ENST00000613187 4845 ntBASIC5.38□□□□□ -1.55
VPS33AQ96AX1 RNA5SP500-201ENST00000364486 119 ntBASIC5.38□□□□□ -1.55
VPS33AQ96AX1 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC5.38□□□□□ -1.55
VPS33AQ96AX1 FPGT-TNNI3K-201ENST00000370893 1195 ntTSL 2 BASIC5.38□□□□□ -1.55
VPS33AQ96AX1 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
VPS33AQ96AX1 RBBP4P5-201ENST00000398583 1266 ntBASIC5.38□□□□□ -1.55
VPS33AQ96AX1 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC5.38□□□□□ -1.55
VPS33AQ96AX1 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.38□□□□□ -1.55
VPS33AQ96AX1 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC5.38□□□□□ -1.55
VPS33AQ96AX1 MTND2P2-201ENST00000434633 945 ntBASIC5.38□□□□□ -1.55
VPS33AQ96AX1 PCBP2P1-201ENST00000437262 977 ntBASIC5.38□□□□□ -1.55
VPS33AQ96AX1 TUBB4BP6-201ENST00000437576 479 ntBASIC5.38□□□□□ -1.55
VPS33AQ96AX1 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC5.38□□□□□ -1.55
VPS33AQ96AX1 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC5.38□□□□□ -1.55
VPS33AQ96AX1 LDHBP2-201ENST00000456969 1005 ntBASIC5.38□□□□□ -1.55
VPS33AQ96AX1 PSMC1P13-201ENST00000458195 985 ntBASIC5.38□□□□□ -1.55
VPS33AQ96AX1 AC073610.1-201ENST00000489971 396 ntBASIC5.38□□□□□ -1.55
VPS33AQ96AX1 AC023424.1-201ENST00000496058 459 ntBASIC5.38□□□□□ -1.55
VPS33AQ96AX1 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC5.38□□□□□ -1.55
VPS33AQ96AX1 AC074255.1-201ENST00000511259 501 ntBASIC5.38□□□□□ -1.55
VPS33AQ96AX1 AC025766.1-201ENST00000514061 409 ntTSL 5 BASIC5.38□□□□□ -1.55
VPS33AQ96AX1 PRMT5P1-201ENST00000514351 598 ntBASIC5.38□□□□□ -1.55
VPS33AQ96AX1 WBP1LP3-201ENST00000523033 208 ntBASIC5.38□□□□□ -1.55
VPS33AQ96AX1 ARL6IP1P3-201ENST00000524544 560 ntBASIC5.38□□□□□ -1.55
VPS33AQ96AX1 OR4A41P-201ENST00000533053 928 ntBASIC5.38□□□□□ -1.55
VPS33AQ96AX1 RPA2P1-201ENST00000556557 721 ntBASIC5.38□□□□□ -1.55
VPS33AQ96AX1 AC121758.1-202ENST00000556917 658 ntBASIC5.38□□□□□ -1.55
VPS33AQ96AX1 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC5.38□□□□□ -1.55
VPS33AQ96AX1 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC5.38□□□□□ -1.55
VPS33AQ96AX1 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
VPS33AQ96AX1 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
VPS33AQ96AX1 MIR7853-201ENST00000584820 132 ntBASIC5.38□□□□□ -1.55
VPS33AQ96AX1 AC005828.7-201ENST00000607331 556 ntBASIC5.38□□□□□ -1.55
VPS33AQ96AX1 FAM72A-208ENST00000607379 1139 ntBASIC5.38□□□□□ -1.55
VPS33AQ96AX1 HTR1DP1-201ENST00000616500 888 ntBASIC5.38□□□□□ -1.55
VPS33AQ96AX1 AC103703.1-201ENST00000634783 663 ntBASIC5.38□□□□□ -1.55
VPS33AQ96AX1 WAC-209ENST00000428935 1320 ntTSL 2 BASIC5.38□□□□□ -1.55
VPS33AQ96AX1 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC5.38□□□□□ -1.55
VPS33AQ96AX1 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.38□□□□□ -1.55
VPS33AQ96AX1 AC092376.2-201ENST00000622621 4116 ntBASIC5.38□□□□□ -1.55
VPS33AQ96AX1 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.38□□□□□ -1.55
VPS33AQ96AX1 AC008079.2-201ENST00000623543 20396 ntBASIC5.38□□□□□ -1.55
VPS33AQ96AX1 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
VPS33AQ96AX1 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
VPS33AQ96AX1 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
VPS33AQ96AX1 AC007996.1-201ENST00000620414 2821 ntBASIC5.38□□□□□ -1.55
VPS33AQ96AX1 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
VPS33AQ96AX1 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
VPS33AQ96AX1 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
VPS33AQ96AX1 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
VPS33AQ96AX1 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
VPS33AQ96AX1 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
VPS33AQ96AX1 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC5.37□□□□□ -1.55
VPS33AQ96AX1 AL353796.1-201ENST00000561542 3241 ntBASIC5.37□□□□□ -1.55
VPS33AQ96AX1 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC5.37□□□□□ -1.55
VPS33AQ96AX1 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
VPS33AQ96AX1 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC5.37□□□□□ -1.55
VPS33AQ96AX1 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
VPS33AQ96AX1 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
VPS33AQ96AX1 AL159987.1-201ENST00000347911 293 ntBASIC5.37□□□□□ -1.55
VPS33AQ96AX1 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC5.37□□□□□ -1.55
VPS33AQ96AX1 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC5.37□□□□□ -1.55
VPS33AQ96AX1 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC5.37□□□□□ -1.55
VPS33AQ96AX1 AC106900.1-201ENST00000418620 456 ntTSL 5 BASIC5.37□□□□□ -1.55
VPS33AQ96AX1 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC5.37□□□□□ -1.55
VPS33AQ96AX1 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
VPS33AQ96AX1 ZFAND6P1-201ENST00000434138 605 ntBASIC5.37□□□□□ -1.55
VPS33AQ96AX1 NANOGP9-201ENST00000439890 892 ntBASIC5.37□□□□□ -1.55
VPS33AQ96AX1 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC5.37□□□□□ -1.55
VPS33AQ96AX1 AL500527.1-201ENST00000448532 255 ntBASIC5.37□□□□□ -1.55
VPS33AQ96AX1 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC5.37□□□□□ -1.55
VPS33AQ96AX1 NXT1P1-201ENST00000458481 316 ntBASIC5.37□□□□□ -1.55
VPS33AQ96AX1 RPS4XP12-201ENST00000461747 709 ntBASIC5.37□□□□□ -1.55
VPS33AQ96AX1 SH2D1A-203ENST00000477673 461 ntTSL 2 BASIC5.37□□□□□ -1.55
VPS33AQ96AX1 RPL32P33-201ENST00000487023 394 ntBASIC5.37□□□□□ -1.55
VPS33AQ96AX1 AC091874.2-201ENST00000505889 720 ntBASIC5.37□□□□□ -1.55
VPS33AQ96AX1 AC011411.1-201ENST00000509592 876 ntBASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms