Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 AC106883.1-201ENST00000418805 562 ntBASIC6.42□□□□□ -1.38
HPS3Q969F9 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC6.42□□□□□ -1.38
HPS3Q969F9 MTCO1P43-201ENST00000431831 488 ntBASIC6.42□□□□□ -1.38
HPS3Q969F9 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC6.42□□□□□ -1.38
HPS3Q969F9 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC6.42□□□□□ -1.38
HPS3Q969F9 DNAJA1P5-201ENST00000440278 943 ntBASIC6.42□□□□□ -1.38
HPS3Q969F9 MTCYBP12-201ENST00000440559 1134 ntBASIC6.42□□□□□ -1.38
HPS3Q969F9 RPS27P5-201ENST00000444247 244 ntBASIC6.42□□□□□ -1.38
HPS3Q969F9 AC023512.1-201ENST00000444513 499 ntBASIC6.42□□□□□ -1.38
HPS3Q969F9 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
HPS3Q969F9 HMGB1P26-201ENST00000452520 628 ntBASIC6.42□□□□□ -1.38
HPS3Q969F9 snoU109.3-201ENST00000459477 145 ntBASIC6.42□□□□□ -1.38
HPS3Q969F9 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC6.42□□□□□ -1.38
HPS3Q969F9 RN7SL423P-201ENST00000486202 304 ntBASIC6.42□□□□□ -1.38
HPS3Q969F9 AC093815.1-201ENST00000508637 280 ntBASIC6.42□□□□□ -1.38
HPS3Q969F9 AC111000.6-201ENST00000514471 709 ntBASIC6.42□□□□□ -1.38
HPS3Q969F9 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC6.42□□□□□ -1.38
HPS3Q969F9 HAUS1P3-201ENST00000523909 662 ntBASIC6.42□□□□□ -1.38
HPS3Q969F9 OR7E13P-201ENST00000526052 910 ntBASIC6.42□□□□□ -1.38
HPS3Q969F9 AP003066.2-201ENST00000529375 555 ntBASIC6.42□□□□□ -1.38
HPS3Q969F9 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC6.42□□□□□ -1.38
HPS3Q969F9 OTX2-203ENST00000554559 715 ntTSL 5 BASIC6.42□□□□□ -1.38
HPS3Q969F9 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC6.42□□□□□ -1.38
HPS3Q969F9 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC6.42□□□□□ -1.38
HPS3Q969F9 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC6.42□□□□□ -1.38
HPS3Q969F9 AC016839.1-201ENST00000578162 867 ntBASIC6.42□□□□□ -1.38
HPS3Q969F9 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC6.42□□□□□ -1.38
HPS3Q969F9 AC008507.2-201ENST00000588402 1176 ntBASIC6.42□□□□□ -1.38
HPS3Q969F9 AC006115.2-201ENST00000596823 202 ntBASIC6.42□□□□□ -1.38
HPS3Q969F9 AL513327.3-201ENST00000602618 469 ntBASIC6.42□□□□□ -1.38
HPS3Q969F9 AC063944.3-201ENST00000609969 533 ntBASIC6.42□□□□□ -1.38
HPS3Q969F9 AC124016.2-201ENST00000610058 665 ntBASIC6.42□□□□□ -1.38
HPS3Q969F9 AL139099.4-201ENST00000614802 114 ntBASIC6.42□□□□□ -1.38
HPS3Q969F9 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
HPS3Q969F9 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
HPS3Q969F9 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC6.42□□□□□ -1.38
HPS3Q969F9 AL645568.2-201ENST00000432815 1337 ntBASIC6.42□□□□□ -1.38
HPS3Q969F9 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
HPS3Q969F9 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
HPS3Q969F9 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC6.42□□□□□ -1.38
HPS3Q969F9 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC6.41□□□□□ -1.38
HPS3Q969F9 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
HPS3Q969F9 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC6.41□□□□□ -1.38
HPS3Q969F9 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC6.41□□□□□ -1.38
HPS3Q969F9 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
HPS3Q969F9 AC068870.3-201ENST00000625077 2536 ntBASIC6.41□□□□□ -1.38
HPS3Q969F9 HSPD1P14-201ENST00000432666 1618 ntBASIC6.41□□□□□ -1.38
HPS3Q969F9 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
HPS3Q969F9 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
HPS3Q969F9 RNU6-252P-201ENST00000363232 107 ntBASIC6.41□□□□□ -1.38
HPS3Q969F9 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
HPS3Q969F9 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
HPS3Q969F9 HMGB3P19-201ENST00000403971 560 ntBASIC6.41□□□□□ -1.38
HPS3Q969F9 MIR1203-201ENST00000408812 85 ntBASIC6.41□□□□□ -1.38
HPS3Q969F9 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC6.41□□□□□ -1.38
HPS3Q969F9 AC073310.1-201ENST00000423226 1033 ntBASIC6.41□□□□□ -1.38
HPS3Q969F9 CRIP1P1-201ENST00000427567 185 ntBASIC6.41□□□□□ -1.38
HPS3Q969F9 AC126120.1-201ENST00000431082 470 ntBASIC6.41□□□□□ -1.38
HPS3Q969F9 NDUFA5P10-201ENST00000432147 357 ntBASIC6.41□□□□□ -1.38
HPS3Q969F9 DEFA9P-201ENST00000433042 285 ntBASIC6.41□□□□□ -1.38
HPS3Q969F9 HNRNPA1P18-201ENST00000433537 927 ntBASIC6.41□□□□□ -1.38
HPS3Q969F9 KRT8P51-201ENST00000438938 274 ntBASIC6.41□□□□□ -1.38
HPS3Q969F9 HMGN1P2-201ENST00000445197 310 ntBASIC6.41□□□□□ -1.38
HPS3Q969F9 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC6.41□□□□□ -1.38
HPS3Q969F9 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC6.41□□□□□ -1.38
HPS3Q969F9 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC6.41□□□□□ -1.38
HPS3Q969F9 AC094085.1-201ENST00000468914 584 ntBASIC6.41□□□□□ -1.38
HPS3Q969F9 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
HPS3Q969F9 RPL21P47-201ENST00000483696 477 ntBASIC6.41□□□□□ -1.38
HPS3Q969F9 DUTP1-201ENST00000493631 470 ntBASIC6.41□□□□□ -1.38
HPS3Q969F9 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC6.41□□□□□ -1.38
HPS3Q969F9 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
HPS3Q969F9 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC6.41□□□□□ -1.38
HPS3Q969F9 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC6.41□□□□□ -1.38
HPS3Q969F9 TRIM77BP-201ENST00000524985 1119 ntBASIC6.41□□□□□ -1.38
HPS3Q969F9 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC6.41□□□□□ -1.38
HPS3Q969F9 AC139697.1-201ENST00000548429 745 ntBASIC6.41□□□□□ -1.38
HPS3Q969F9 AC104229.1-201ENST00000561364 255 ntBASIC6.41□□□□□ -1.38
HPS3Q969F9 AC090666.1-201ENST00000578241 445 ntBASIC6.41□□□□□ -1.38
HPS3Q969F9 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC6.41□□□□□ -1.38
HPS3Q969F9 AL121652.1-201ENST00000608851 448 ntBASIC6.41□□□□□ -1.38
HPS3Q969F9 RPL23AP61-201ENST00000623642 466 ntBASIC6.41□□□□□ -1.38
HPS3Q969F9 AC126544.2-201ENST00000625174 749 ntBASIC6.41□□□□□ -1.38
HPS3Q969F9 UGP2-232ENST00000640075 567 ntTSL 5 BASIC6.41□□□□□ -1.38
HPS3Q969F9 SPATA2P1-201ENST00000431223 2055 ntBASIC6.41□□□□□ -1.38
HPS3Q969F9 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC6.41□□□□□ -1.38
HPS3Q969F9 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC6.41□□□□□ -1.38
HPS3Q969F9 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
HPS3Q969F9 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC6.41□□□□□ -1.38
HPS3Q969F9 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
HPS3Q969F9 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
HPS3Q969F9 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC6.41□□□□□ -1.38
HPS3Q969F9 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC6.4□□□□□ -1.38
HPS3Q969F9 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC6.4□□□□□ -1.38
HPS3Q969F9 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC6.4□□□□□ -1.38
HPS3Q969F9 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.38
HPS3Q969F9 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC6.4□□□□□ -1.38
HPS3Q969F9 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
HPS3Q969F9 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
HPS3Q969F9 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC6.4□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 89.3 ms