Protein–RNA interactions for Protein: Q92547

TOPBP1, DNA topoisomerase 2-binding protein 1, humanhuman

Predictions only

Length 1,522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1Q92547 TVP23CP2-201ENST00000571473 623 ntBASIC8.54□□□□□ -1.04
TOPBP1Q92547 IGF1R-206ENST00000558762 11726 ntAPPRIS ALT1 TSL 1 (best) BASIC8.54□□□□□ -1.04
TOPBP1Q92547 NBPF19-206ENST00000621744 14425 ntTSL 5 BASIC8.54□□□□□ -1.04
TOPBP1Q92547 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC8.54□□□□□ -1.04
TOPBP1Q92547 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC8.54□□□□□ -1.04
TOPBP1Q92547 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC8.54□□□□□ -1.04
TOPBP1Q92547 MSR1-202ENST00000350896 3572 ntTSL 5 BASIC8.54□□□□□ -1.04
TOPBP1Q92547 AC012213.2-201ENST00000562917 4597 ntBASIC8.54□□□□□ -1.04
TOPBP1Q92547 MAVS-202ENST00000428216 11714 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
TOPBP1Q92547 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
TOPBP1Q92547 CTNND1-231ENST00000532463 5749 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
TOPBP1Q92547 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC8.54□□□□□ -1.04
TOPBP1Q92547 PTPN14-201ENST00000366956 12985 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
TOPBP1Q92547 SSPO-201ENST00000378016 15589 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
TOPBP1Q92547 EYA4-206ENST00000431403 2154 ntTSL 5 BASIC8.54□□□□□ -1.04
TOPBP1Q92547 TCF4-278ENST00000636400 8343 ntTSL 5 BASIC8.54□□□□□ -1.04
TOPBP1Q92547 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC8.54□□□□□ -1.04
TOPBP1Q92547 SNORA57.1-201ENST00000391227 145 ntBASIC8.54□□□□□ -1.04
TOPBP1Q92547 AL021331.1-201ENST00000402817 582 ntBASIC8.54□□□□□ -1.04
TOPBP1Q92547 AC092651.1-201ENST00000426110 312 ntBASIC8.54□□□□□ -1.04
TOPBP1Q92547 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC8.54□□□□□ -1.04
TOPBP1Q92547 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC8.54□□□□□ -1.04
TOPBP1Q92547 SLC25A18P1-201ENST00000449385 454 ntBASIC8.54□□□□□ -1.04
TOPBP1Q92547 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC8.54□□□□□ -1.04
TOPBP1Q92547 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC8.54□□□□□ -1.04
TOPBP1Q92547 IGHVIII-2-1-201ENST00000518843 291 ntBASIC8.54□□□□□ -1.04
TOPBP1Q92547 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC8.54□□□□□ -1.04
TOPBP1Q92547 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC8.54□□□□□ -1.04
TOPBP1Q92547 AL020997.2-201ENST00000602607 184 ntBASIC8.54□□□□□ -1.04
TOPBP1Q92547 AL139041.1-201ENST00000605480 610 ntBASIC8.54□□□□□ -1.04
TOPBP1Q92547 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC8.54□□□□□ -1.04
TOPBP1Q92547 AC100871.1-201ENST00000507871 1456 ntBASIC8.54□□□□□ -1.04
TOPBP1Q92547 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
TOPBP1Q92547 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
TOPBP1Q92547 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC8.53□□□□□ -1.04
TOPBP1Q92547 NCKAP1-202ENST00000361354 20347 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
TOPBP1Q92547 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
TOPBP1Q92547 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
TOPBP1Q92547 MIR589-201ENST00000385238 99 ntBASIC8.53□□□□□ -1.04
TOPBP1Q92547 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC8.53□□□□□ -1.04
TOPBP1Q92547 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC8.53□□□□□ -1.04
TOPBP1Q92547 RPL12P34-201ENST00000424532 479 ntBASIC8.53□□□□□ -1.04
TOPBP1Q92547 AL732292.1-201ENST00000426692 226 ntBASIC8.53□□□□□ -1.04
TOPBP1Q92547 ZNF23-204ENST00000428724 1932 ntAPPRIS P3 TSL 1 (best) BASIC8.53□□□□□ -1.04
TOPBP1Q92547 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC8.53□□□□□ -1.04
TOPBP1Q92547 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC8.53□□□□□ -1.04
TOPBP1Q92547 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC8.53□□□□□ -1.04
TOPBP1Q92547 KPNA2P3-201ENST00000584190 848 ntBASIC8.53□□□□□ -1.04
TOPBP1Q92547 AL136359.1-201ENST00000625090 565 ntTSL 2 BASIC8.53□□□□□ -1.04
TOPBP1Q92547 IPO5-229ENST00000631030 192 ntTSL 5 BASIC8.53□□□□□ -1.04
TOPBP1Q92547 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
TOPBP1Q92547 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC8.52□□□□□ -1.04
TOPBP1Q92547 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC8.52□□□□□ -1.05
TOPBP1Q92547 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
TOPBP1Q92547 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
TOPBP1Q92547 RNA5SP447-201ENST00000363749 119 ntBASIC8.52□□□□□ -1.05
TOPBP1Q92547 MIR298-201ENST00000401212 88 ntBASIC8.52□□□□□ -1.05
TOPBP1Q92547 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
TOPBP1Q92547 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC8.52□□□□□ -1.05
TOPBP1Q92547 AL136455.1-201ENST00000441083 1240 ntBASIC8.52□□□□□ -1.05
TOPBP1Q92547 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC8.52□□□□□ -1.05
TOPBP1Q92547 FAM174B-202ENST00000553393 495 ntTSL 2 BASIC8.52□□□□□ -1.05
TOPBP1Q92547 AC021483.2-201ENST00000567415 758 ntBASIC8.52□□□□□ -1.05
TOPBP1Q92547 RPL12P25-202ENST00000598100 674 ntBASIC8.52□□□□□ -1.05
TOPBP1Q92547 AC011626.1-201ENST00000604710 562 ntBASIC8.52□□□□□ -1.05
TOPBP1Q92547 AL450226.2-201ENST00000622913 439 ntBASIC8.52□□□□□ -1.05
TOPBP1Q92547 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC8.52□□□□□ -1.05
TOPBP1Q92547 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC8.52□□□□□ -1.05
TOPBP1Q92547 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
TOPBP1Q92547 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
TOPBP1Q92547 PLCZ1-201ENST00000266505 2148 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
TOPBP1Q92547 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
TOPBP1Q92547 AC099654.2-201ENST00000433031 1980 ntBASIC8.52□□□□□ -1.05
TOPBP1Q92547 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC8.52□□□□□ -1.05
TOPBP1Q92547 MED28-201ENST00000237380 10868 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
TOPBP1Q92547 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
TOPBP1Q92547 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC8.51□□□□□ -1.05
TOPBP1Q92547 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC8.51□□□□□ -1.05
TOPBP1Q92547 U3.30-201ENST00000391308 210 ntBASIC8.51□□□□□ -1.05
TOPBP1Q92547 MRPS21P2-201ENST00000424704 264 ntBASIC8.51□□□□□ -1.05
TOPBP1Q92547 RPS27AP6-201ENST00000427962 448 ntBASIC8.51□□□□□ -1.05
TOPBP1Q92547 ENPP7P9-201ENST00000514456 627 ntBASIC8.51□□□□□ -1.05
TOPBP1Q92547 AP005119.2-201ENST00000579735 1105 ntBASIC8.51□□□□□ -1.05
TOPBP1Q92547 MIR6853-201ENST00000619642 74 ntBASIC8.51□□□□□ -1.05
TOPBP1Q92547 OR5AU1-202ENST00000641039 8232 ntAPPRIS P1 BASIC8.51□□□□□ -1.05
TOPBP1Q92547 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
TOPBP1Q92547 NUP107-211ENST00000539906 3004 ntTSL 2 BASIC8.51□□□□□ -1.05
TOPBP1Q92547 NFATC3-202ENST00000346183 6040 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
TOPBP1Q92547 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
TOPBP1Q92547 IGF1-206ENST00000456098 7370 ntTSL 5 BASIC8.51□□□□□ -1.05
TOPBP1Q92547 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC8.51□□□□□ -1.05
TOPBP1Q92547 AC010329.1-201ENST00000593903 8328 ntBASIC8.51□□□□□ -1.05
TOPBP1Q92547 ZBTB34-202ENST00000373452 6528 ntAPPRIS P1 BASIC8.51□□□□□ -1.05
TOPBP1Q92547 UTP14C-201ENST00000521776 5529 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
TOPBP1Q92547 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC8.5□□□□□ -1.05
TOPBP1Q92547 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC8.5□□□□□ -1.05
TOPBP1Q92547 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC8.5□□□□□ -1.05
TOPBP1Q92547 AC100784.1-201ENST00000522790 310 ntBASIC8.5□□□□□ -1.05
TOPBP1Q92547 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC8.5□□□□□ -1.05
TOPBP1Q92547 AL356218.2-201ENST00000605264 187 ntBASIC8.5□□□□□ -1.05
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms