Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC5.44□□□□□ -1.54
CDKL3Q8IVW4 TMEM97P2-201ENST00000517841 403 ntBASIC5.44□□□□□ -1.54
CDKL3Q8IVW4 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC5.44□□□□□ -1.54
CDKL3Q8IVW4 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC5.44□□□□□ -1.54
CDKL3Q8IVW4 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC5.44□□□□□ -1.54
CDKL3Q8IVW4 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC5.44□□□□□ -1.54
CDKL3Q8IVW4 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC5.44□□□□□ -1.54
CDKL3Q8IVW4 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC5.44□□□□□ -1.54
CDKL3Q8IVW4 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC5.44□□□□□ -1.54
CDKL3Q8IVW4 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
CDKL3Q8IVW4 AC019322.1-201ENST00000571869 389 ntBASIC5.44□□□□□ -1.54
CDKL3Q8IVW4 AC022884.2-201ENST00000578535 580 ntBASIC5.44□□□□□ -1.54
CDKL3Q8IVW4 RN7SL708P-201ENST00000580952 299 ntBASIC5.44□□□□□ -1.54
CDKL3Q8IVW4 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC5.44□□□□□ -1.54
CDKL3Q8IVW4 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC5.44□□□□□ -1.54
CDKL3Q8IVW4 AL162431.4-201ENST00000604674 411 ntBASIC5.44□□□□□ -1.54
CDKL3Q8IVW4 AC011626.1-201ENST00000604710 562 ntBASIC5.44□□□□□ -1.54
CDKL3Q8IVW4 AC010245.2-201ENST00000606908 1167 ntBASIC5.44□□□□□ -1.54
CDKL3Q8IVW4 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CDKL3Q8IVW4 RNA5SP440-201ENST00000612665 119 ntBASIC5.44□□□□□ -1.54
CDKL3Q8IVW4 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
CDKL3Q8IVW4 MIR6861-201ENST00000618657 64 ntBASIC5.44□□□□□ -1.54
CDKL3Q8IVW4 MIR8080-201ENST00000622224 89 ntBASIC5.44□□□□□ -1.54
CDKL3Q8IVW4 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC5.44□□□□□ -1.54
CDKL3Q8IVW4 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CDKL3Q8IVW4 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.44□□□□□ -1.54
CDKL3Q8IVW4 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CDKL3Q8IVW4 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
CDKL3Q8IVW4 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CDKL3Q8IVW4 MTCO1P46-201ENST00000451639 1491 ntBASIC5.44□□□□□ -1.54
CDKL3Q8IVW4 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
CDKL3Q8IVW4 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CDKL3Q8IVW4 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
CDKL3Q8IVW4 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
CDKL3Q8IVW4 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC5.44□□□□□ -1.54
CDKL3Q8IVW4 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
CDKL3Q8IVW4 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CDKL3Q8IVW4 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CDKL3Q8IVW4 SMG1P7-201ENST00000565246 2704 ntBASIC5.43□□□□□ -1.54
CDKL3Q8IVW4 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CDKL3Q8IVW4 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
CDKL3Q8IVW4 RN7SKP124-201ENST00000364730 341 ntBASIC5.43□□□□□ -1.54
CDKL3Q8IVW4 RN7SKP15-201ENST00000364742 309 ntBASIC5.43□□□□□ -1.54
CDKL3Q8IVW4 RNA5SP223-201ENST00000365174 120 ntBASIC5.43□□□□□ -1.54
CDKL3Q8IVW4 MIR105-1-201ENST00000385222 81 ntBASIC5.43□□□□□ -1.54
CDKL3Q8IVW4 DSTNP5-201ENST00000427921 523 ntBASIC5.43□□□□□ -1.54
CDKL3Q8IVW4 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC5.43□□□□□ -1.54
CDKL3Q8IVW4 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CDKL3Q8IVW4 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC5.43□□□□□ -1.54
CDKL3Q8IVW4 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC5.43□□□□□ -1.54
CDKL3Q8IVW4 AC104634.1-201ENST00000452720 462 ntBASIC5.43□□□□□ -1.54
CDKL3Q8IVW4 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC5.43□□□□□ -1.54
CDKL3Q8IVW4 RN7SL189P-201ENST00000468631 289 ntBASIC5.43□□□□□ -1.54
CDKL3Q8IVW4 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
CDKL3Q8IVW4 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC5.43□□□□□ -1.54
CDKL3Q8IVW4 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC5.43□□□□□ -1.54
CDKL3Q8IVW4 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CDKL3Q8IVW4 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.43□□□□□ -1.54
CDKL3Q8IVW4 AC022404.1-201ENST00000555320 273 ntBASIC5.43□□□□□ -1.54
CDKL3Q8IVW4 AC106730.2-201ENST00000566641 540 ntBASIC5.43□□□□□ -1.54
CDKL3Q8IVW4 AC127024.5-201ENST00000580085 462 ntBASIC5.43□□□□□ -1.54
CDKL3Q8IVW4 AC104695.2-201ENST00000605056 775 ntBASIC5.43□□□□□ -1.54
CDKL3Q8IVW4 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC5.43□□□□□ -1.54
CDKL3Q8IVW4 MTCO1P1-201ENST00000624263 1081 ntBASIC5.43□□□□□ -1.54
CDKL3Q8IVW4 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CDKL3Q8IVW4 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CDKL3Q8IVW4 AL034549.2-201ENST00000618285 3373 ntBASIC5.43□□□□□ -1.54
CDKL3Q8IVW4 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
CDKL3Q8IVW4 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CDKL3Q8IVW4 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
CDKL3Q8IVW4 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
CDKL3Q8IVW4 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
CDKL3Q8IVW4 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC5.43□□□□□ -1.54
CDKL3Q8IVW4 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
CDKL3Q8IVW4 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CDKL3Q8IVW4 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.43□□□□□ -1.54
CDKL3Q8IVW4 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.42□□□□□ -1.54
CDKL3Q8IVW4 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC5.42□□□□□ -1.54
CDKL3Q8IVW4 CASC19-248ENST00000641674 1356 ntBASIC5.42□□□□□ -1.54
CDKL3Q8IVW4 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CDKL3Q8IVW4 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CDKL3Q8IVW4 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CDKL3Q8IVW4 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
CDKL3Q8IVW4 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CDKL3Q8IVW4 AL031985.1-201ENST00000392713 418 ntBASIC5.42□□□□□ -1.54
CDKL3Q8IVW4 AL391422.1-201ENST00000402155 436 ntBASIC5.42□□□□□ -1.54
CDKL3Q8IVW4 OR4K12P-201ENST00000406538 961 ntBASIC5.42□□□□□ -1.54
CDKL3Q8IVW4 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC5.42□□□□□ -1.54
CDKL3Q8IVW4 RPS29P14-201ENST00000431518 171 ntBASIC5.42□□□□□ -1.54
CDKL3Q8IVW4 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC5.42□□□□□ -1.54
CDKL3Q8IVW4 AL161722.2-201ENST00000434731 981 ntBASIC5.42□□□□□ -1.54
CDKL3Q8IVW4 CLUHP1-201ENST00000435012 1190 ntBASIC5.42□□□□□ -1.54
CDKL3Q8IVW4 AC046176.1-201ENST00000435260 1170 ntBASIC5.42□□□□□ -1.54
CDKL3Q8IVW4 AC012075.1-201ENST00000436549 580 ntBASIC5.42□□□□□ -1.54
CDKL3Q8IVW4 RPS27AP2-201ENST00000457576 465 ntBASIC5.42□□□□□ -1.54
CDKL3Q8IVW4 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC5.42□□□□□ -1.54
CDKL3Q8IVW4 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC5.42□□□□□ -1.54
CDKL3Q8IVW4 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.42□□□□□ -1.54
CDKL3Q8IVW4 RPL35AP19-201ENST00000469425 329 ntBASIC5.42□□□□□ -1.54
CDKL3Q8IVW4 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 111 ms