Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 FANCM-202ENST00000542564 6167 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
VPS13CQ709C8 ERLIN2-211ENST00000523887 2347 ntTSL 2 BASIC4.09□□□□□ -1.75
VPS13CQ709C8 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC4.09□□□□□ -1.75
VPS13CQ709C8 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC4.09□□□□□ -1.75
VPS13CQ709C8 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
VPS13CQ709C8 MIR298-201ENST00000401212 88 ntBASIC4.09□□□□□ -1.75
VPS13CQ709C8 RNA5SP345-201ENST00000410646 108 ntBASIC4.09□□□□□ -1.75
VPS13CQ709C8 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC4.09□□□□□ -1.75
VPS13CQ709C8 OR1H1P-201ENST00000448731 937 ntBASIC4.09□□□□□ -1.75
VPS13CQ709C8 MTND2P28-201ENST00000457540 1044 ntBASIC4.09□□□□□ -1.75
VPS13CQ709C8 AC012400.1-201ENST00000518452 381 ntBASIC4.09□□□□□ -1.75
VPS13CQ709C8 AC108738.1-201ENST00000603703 237 ntBASIC4.09□□□□□ -1.75
VPS13CQ709C8 SEL1L-201ENST00000336735 7925 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
VPS13CQ709C8 ERVFRD-3-201ENST00000578561 1617 ntBASIC4.09□□□□□ -1.75
VPS13CQ709C8 WDR87-201ENST00000303868 8847 ntAPPRIS P3 TSL 2 BASIC4.09□□□□□ -1.76
VPS13CQ709C8 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC4.09□□□□□ -1.76
VPS13CQ709C8 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
VPS13CQ709C8 SNORA70H-201ENST00000383910 135 ntBASIC4.09□□□□□ -1.76
VPS13CQ709C8 SNORA70J-201ENST00000384182 135 ntBASIC4.09□□□□□ -1.76
VPS13CQ709C8 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC4.09□□□□□ -1.76
VPS13CQ709C8 AC108463.1-201ENST00000450258 347 ntBASIC4.09□□□□□ -1.76
VPS13CQ709C8 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
VPS13CQ709C8 SNORA67.7-201ENST00000516664 135 ntBASIC4.09□□□□□ -1.76
VPS13CQ709C8 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
VPS13CQ709C8 KIAA0100-203ENST00000544884 6856 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.76
VPS13CQ709C8 TRPM3-204ENST00000360823 5966 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.76
VPS13CQ709C8 XIAP-202ENST00000371199 8591 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
VPS13CQ709C8 SPTAN1-223ENST00000630866 7498 ntTSL 5 BASIC4.08□□□□□ -1.76
VPS13CQ709C8 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
VPS13CQ709C8 AC017079.1-201ENST00000333650 415 ntBASIC4.08□□□□□ -1.76
VPS13CQ709C8 RN7SKP114-201ENST00000410327 279 ntBASIC4.08□□□□□ -1.76
VPS13CQ709C8 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC4.08□□□□□ -1.76
VPS13CQ709C8 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC4.08□□□□□ -1.76
VPS13CQ709C8 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC4.08□□□□□ -1.76
VPS13CQ709C8 AL121932.1-201ENST00000605542 214 ntBASIC4.08□□□□□ -1.76
VPS13CQ709C8 AC120338.1-201ENST00000625074 1541 ntBASIC4.08□□□□□ -1.76
VPS13CQ709C8 RUNX1T1-250ENST00000614812 7483 ntAPPRIS P3 TSL 5 BASIC4.08□□□□□ -1.76
VPS13CQ709C8 MAP1A-202ENST00000382031 10553 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
VPS13CQ709C8 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
VPS13CQ709C8 CEACAM5-202ENST00000398599 2451 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
VPS13CQ709C8 RNA5SP397-201ENST00000391323 118 ntBASIC4.08□□□□□ -1.76
VPS13CQ709C8 AL139095.3-201ENST00000419672 1203 ntBASIC4.08□□□□□ -1.76
VPS13CQ709C8 RPL23AP93-201ENST00000440847 484 ntBASIC4.08□□□□□ -1.76
VPS13CQ709C8 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.08□□□□□ -1.76
VPS13CQ709C8 AC020890.1-201ENST00000491837 504 ntBASIC4.08□□□□□ -1.76
VPS13CQ709C8 RN7SKP98-201ENST00000517070 156 ntBASIC4.08□□□□□ -1.76
VPS13CQ709C8 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC4.08□□□□□ -1.76
VPS13CQ709C8 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC4.08□□□□□ -1.76
VPS13CQ709C8 AL158152.1-201ENST00000602652 1435 ntBASIC4.08□□□□□ -1.76
VPS13CQ709C8 ARID1B-232ENST00000637904 5913 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
VPS13CQ709C8 AC073365.1-203ENST00000641055 1992 ntBASIC4.08□□□□□ -1.76
VPS13CQ709C8 MAVS-201ENST00000416600 11596 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
VPS13CQ709C8 BRD8-202ENST00000254900 4388 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
VPS13CQ709C8 WDFY2-201ENST00000298125 9321 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
VPS13CQ709C8 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
VPS13CQ709C8 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
VPS13CQ709C8 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
VPS13CQ709C8 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
VPS13CQ709C8 RUNDC3A-AS1-202ENST00000588097 5203 ntTSL 5 BASIC4.08□□□□□ -1.76
VPS13CQ709C8 ABCA9-202ENST00000453985 6116 ntTSL 5 BASIC4.08□□□□□ -1.76
VPS13CQ709C8 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
VPS13CQ709C8 RN7SKP224-201ENST00000364140 325 ntBASIC4.08□□□□□ -1.76
VPS13CQ709C8 PPIAP9-201ENST00000403866 498 ntBASIC4.08□□□□□ -1.76
VPS13CQ709C8 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC4.08□□□□□ -1.76
VPS13CQ709C8 RPS17P8-201ENST00000434525 335 ntBASIC4.08□□□□□ -1.76
VPS13CQ709C8 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
VPS13CQ709C8 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC4.08□□□□□ -1.76
VPS13CQ709C8 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC4.08□□□□□ -1.76
VPS13CQ709C8 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC4.08□□□□□ -1.76
VPS13CQ709C8 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC4.08□□□□□ -1.76
VPS13CQ709C8 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
VPS13CQ709C8 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC4.08□□□□□ -1.76
VPS13CQ709C8 RPL7P50-201ENST00000600588 727 ntBASIC4.08□□□□□ -1.76
VPS13CQ709C8 AC099676.1-201ENST00000608886 657 ntBASIC4.08□□□□□ -1.76
VPS13CQ709C8 AL356608.1-201ENST00000610034 820 ntBASIC4.08□□□□□ -1.76
VPS13CQ709C8 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
VPS13CQ709C8 DSP-202ENST00000418664 7812 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
VPS13CQ709C8 CRYBG3-201ENST00000389622 10729 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
VPS13CQ709C8 AC008938.1-201ENST00000566929 6510 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
VPS13CQ709C8 LRIG2-201ENST00000361127 11555 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
VPS13CQ709C8 FGD6-201ENST00000343958 9288 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
VPS13CQ709C8 CARD8-202ENST00000391898 5263 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
VPS13CQ709C8 LRRC37A6P-202ENST00000448648 5444 ntBASIC4.07□□□□□ -1.76
VPS13CQ709C8 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
VPS13CQ709C8 SDAD1P1-202ENST00000524156 2051 ntBASIC4.07□□□□□ -1.76
VPS13CQ709C8 ZCCHC2-204ENST00000586834 4765 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
VPS13CQ709C8 ENAH-204ENST00000366844 13168 ntAPPRIS P4 TSL 1 (best) BASIC4.07□□□□□ -1.76
VPS13CQ709C8 OR4K17-201ENST00000315543 1032 ntBASIC4.07□□□□□ -1.76
VPS13CQ709C8 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC4.07□□□□□ -1.76
VPS13CQ709C8 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC4.07□□□□□ -1.76
VPS13CQ709C8 GAPDHP49-201ENST00000421421 961 ntBASIC4.07□□□□□ -1.76
VPS13CQ709C8 NRBF2P3-201ENST00000432731 865 ntBASIC4.07□□□□□ -1.76
VPS13CQ709C8 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC4.07□□□□□ -1.76
VPS13CQ709C8 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC4.07□□□□□ -1.76
VPS13CQ709C8 SLC25A14P1-201ENST00000502867 901 ntBASIC4.07□□□□□ -1.76
VPS13CQ709C8 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC4.07□□□□□ -1.76
VPS13CQ709C8 RN7SL176P-201ENST00000580352 264 ntBASIC4.07□□□□□ -1.76
VPS13CQ709C8 AC009027.1-201ENST00000604510 479 ntBASIC4.07□□□□□ -1.76
VPS13CQ709C8 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC4.07□□□□□ -1.76
VPS13CQ709C8 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 70.2 ms