Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.04□□□□□ -1.6
H3F3CQ6NXT2 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
H3F3CQ6NXT2 AC109780.1-201ENST00000451768 1344 ntBASIC5.04□□□□□ -1.6
H3F3CQ6NXT2 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC5.04□□□□□ -1.6
H3F3CQ6NXT2 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
H3F3CQ6NXT2 AL603750.1-201ENST00000624216 1717 ntBASIC5.04□□□□□ -1.6
H3F3CQ6NXT2 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.04□□□□□ -1.6
H3F3CQ6NXT2 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
H3F3CQ6NXT2 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
H3F3CQ6NXT2 RNU6-249P-201ENST00000363016 102 ntBASIC5.04□□□□□ -1.6
H3F3CQ6NXT2 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
H3F3CQ6NXT2 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC5.04□□□□□ -1.6
H3F3CQ6NXT2 DPPA2P3-201ENST00000411853 655 ntBASIC5.04□□□□□ -1.6
H3F3CQ6NXT2 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC5.04□□□□□ -1.6
H3F3CQ6NXT2 AC138761.5-201ENST00000433967 325 ntBASIC5.04□□□□□ -1.6
H3F3CQ6NXT2 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC5.04□□□□□ -1.6
H3F3CQ6NXT2 GAPDHP14-201ENST00000450472 937 ntBASIC5.04□□□□□ -1.6
H3F3CQ6NXT2 AC239798.3-201ENST00000454459 408 ntBASIC5.04□□□□□ -1.6
H3F3CQ6NXT2 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC5.04□□□□□ -1.6
H3F3CQ6NXT2 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC5.04□□□□□ -1.6
H3F3CQ6NXT2 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
H3F3CQ6NXT2 AC072052.1-201ENST00000496556 306 ntBASIC5.04□□□□□ -1.6
H3F3CQ6NXT2 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC5.04□□□□□ -1.6
H3F3CQ6NXT2 HIGD1AP14-201ENST00000507617 282 ntBASIC5.04□□□□□ -1.6
H3F3CQ6NXT2 MTND6P2-201ENST00000512226 524 ntBASIC5.04□□□□□ -1.6
H3F3CQ6NXT2 SCARNA16.4-201ENST00000516956 187 ntBASIC5.04□□□□□ -1.6
H3F3CQ6NXT2 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC5.04□□□□□ -1.6
H3F3CQ6NXT2 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC5.04□□□□□ -1.6
H3F3CQ6NXT2 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC5.04□□□□□ -1.6
H3F3CQ6NXT2 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC5.04□□□□□ -1.6
H3F3CQ6NXT2 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC5.04□□□□□ -1.6
H3F3CQ6NXT2 HAUS8P1-201ENST00000549005 542 ntBASIC5.04□□□□□ -1.6
H3F3CQ6NXT2 AL359219.2-201ENST00000555184 348 ntBASIC5.04□□□□□ -1.6
H3F3CQ6NXT2 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC5.04□□□□□ -1.6
H3F3CQ6NXT2 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC5.04□□□□□ -1.6
H3F3CQ6NXT2 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC5.04□□□□□ -1.6
H3F3CQ6NXT2 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
H3F3CQ6NXT2 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC5.04□□□□□ -1.6
H3F3CQ6NXT2 XIST-210ENST00000602863 775 ntTSL 3 BASIC5.04□□□□□ -1.6
H3F3CQ6NXT2 AC211433.2-201ENST00000608433 387 ntBASIC5.04□□□□□ -1.6
H3F3CQ6NXT2 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC5.04□□□□□ -1.6
H3F3CQ6NXT2 AC109583.2-201ENST00000617367 129 ntBASIC5.04□□□□□ -1.6
H3F3CQ6NXT2 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC5.04□□□□□ -1.6
H3F3CQ6NXT2 AC074101.1-201ENST00000637861 241 ntBASIC5.04□□□□□ -1.6
H3F3CQ6NXT2 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.04□□□□□ -1.6
H3F3CQ6NXT2 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
H3F3CQ6NXT2 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC5.04□□□□□ -1.6
H3F3CQ6NXT2 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
H3F3CQ6NXT2 AC018809.2-201ENST00000602436 3823 ntBASIC5.04□□□□□ -1.6
H3F3CQ6NXT2 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.04□□□□□ -1.6
H3F3CQ6NXT2 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
H3F3CQ6NXT2 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
H3F3CQ6NXT2 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
H3F3CQ6NXT2 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
H3F3CQ6NXT2 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
H3F3CQ6NXT2 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
H3F3CQ6NXT2 C4BPAP1-201ENST00000415474 1893 ntBASIC5.03□□□□□ -1.6
H3F3CQ6NXT2 MTND5P23-201ENST00000430812 1655 ntBASIC5.03□□□□□ -1.6
H3F3CQ6NXT2 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
H3F3CQ6NXT2 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
H3F3CQ6NXT2 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
H3F3CQ6NXT2 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC5.03□□□□□ -1.6
H3F3CQ6NXT2 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
H3F3CQ6NXT2 RNU1-19P-201ENST00000363306 165 ntBASIC5.03□□□□□ -1.6
H3F3CQ6NXT2 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
H3F3CQ6NXT2 AL133388.1-201ENST00000404509 287 ntBASIC5.03□□□□□ -1.6
H3F3CQ6NXT2 SNORA11B-201ENST00000408175 129 ntBASIC5.03□□□□□ -1.6
H3F3CQ6NXT2 AC002524.1-201ENST00000411687 547 ntBASIC5.03□□□□□ -1.6
H3F3CQ6NXT2 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC5.03□□□□□ -1.6
H3F3CQ6NXT2 AC079809.1-201ENST00000415468 276 ntBASIC5.03□□□□□ -1.6
H3F3CQ6NXT2 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC5.03□□□□□ -1.6
H3F3CQ6NXT2 AL121878.1-201ENST00000418638 859 ntBASIC5.03□□□□□ -1.6
H3F3CQ6NXT2 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.03□□□□□ -1.6
H3F3CQ6NXT2 AC093655.2-201ENST00000425735 631 ntBASIC5.03□□□□□ -1.6
H3F3CQ6NXT2 AL136231.1-201ENST00000429407 730 ntBASIC5.03□□□□□ -1.6
H3F3CQ6NXT2 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC5.03□□□□□ -1.6
H3F3CQ6NXT2 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC5.03□□□□□ -1.6
H3F3CQ6NXT2 AC245047.2-201ENST00000441060 530 ntBASIC5.03□□□□□ -1.6
H3F3CQ6NXT2 MED28P3-201ENST00000444288 531 ntBASIC5.03□□□□□ -1.6
H3F3CQ6NXT2 EEF1B2P5-201ENST00000444820 548 ntBASIC5.03□□□□□ -1.6
H3F3CQ6NXT2 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC5.03□□□□□ -1.6
H3F3CQ6NXT2 GAPDHP25-201ENST00000447061 1001 ntBASIC5.03□□□□□ -1.6
H3F3CQ6NXT2 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC5.03□□□□□ -1.6
H3F3CQ6NXT2 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC5.03□□□□□ -1.6
H3F3CQ6NXT2 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC5.03□□□□□ -1.6
H3F3CQ6NXT2 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.03□□□□□ -1.6
H3F3CQ6NXT2 RN7SL515P-201ENST00000463999 297 ntBASIC5.03□□□□□ -1.6
H3F3CQ6NXT2 AC005532.2-201ENST00000467154 373 ntBASIC5.03□□□□□ -1.6
H3F3CQ6NXT2 RN7SL188P-201ENST00000469842 285 ntBASIC5.03□□□□□ -1.6
H3F3CQ6NXT2 RPL7P6-201ENST00000480903 738 ntBASIC5.03□□□□□ -1.6
H3F3CQ6NXT2 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC5.03□□□□□ -1.6
H3F3CQ6NXT2 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC5.03□□□□□ -1.6
H3F3CQ6NXT2 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC5.03□□□□□ -1.6
H3F3CQ6NXT2 AC020937.1-201ENST00000519677 1013 ntBASIC5.03□□□□□ -1.6
H3F3CQ6NXT2 HMGB1P40-201ENST00000525121 540 ntBASIC5.03□□□□□ -1.6
H3F3CQ6NXT2 OR10G5P-201ENST00000532733 358 ntBASIC5.03□□□□□ -1.6
H3F3CQ6NXT2 NELL2-211ENST00000548826 559 ntTSL 2 BASIC5.03□□□□□ -1.6
H3F3CQ6NXT2 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC5.03□□□□□ -1.6
H3F3CQ6NXT2 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC5.03□□□□□ -1.6
H3F3CQ6NXT2 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 86.4 ms