Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 RNU4-73P-201ENST00000363164 141 ntBASIC8.51□□□□□ -1.05
RC3H1Q5TC82 TINAG-202ENST00000370864 692 ntTSL 2 BASIC8.51□□□□□ -1.05
RC3H1Q5TC82 SUGT1P2-201ENST00000379452 992 ntBASIC8.51□□□□□ -1.05
RC3H1Q5TC82 RPS7P13-201ENST00000413955 498 ntBASIC8.51□□□□□ -1.05
RC3H1Q5TC82 RPL21P50-201ENST00000417698 477 ntBASIC8.51□□□□□ -1.05
RC3H1Q5TC82 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC8.51□□□□□ -1.05
RC3H1Q5TC82 AC233728.2-201ENST00000425348 757 ntBASIC8.51□□□□□ -1.05
RC3H1Q5TC82 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC8.51□□□□□ -1.05
RC3H1Q5TC82 RPS29P14-201ENST00000431518 171 ntBASIC8.51□□□□□ -1.05
RC3H1Q5TC82 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC8.51□□□□□ -1.05
RC3H1Q5TC82 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC8.51□□□□□ -1.05
RC3H1Q5TC82 RPL35AP19-201ENST00000469425 329 ntBASIC8.51□□□□□ -1.05
RC3H1Q5TC82 AC104971.1-201ENST00000495117 578 ntBASIC8.51□□□□□ -1.05
RC3H1Q5TC82 H3F3AP3-201ENST00000497682 407 ntBASIC8.51□□□□□ -1.05
RC3H1Q5TC82 AL358832.1-201ENST00000497800 389 ntBASIC8.51□□□□□ -1.05
RC3H1Q5TC82 AC021220.1-201ENST00000507445 630 ntBASIC8.51□□□□□ -1.05
RC3H1Q5TC82 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC8.51□□□□□ -1.05
RC3H1Q5TC82 ZNF519P4-201ENST00000514008 125 ntBASIC8.51□□□□□ -1.05
RC3H1Q5TC82 AC087360.1-201ENST00000518788 616 ntBASIC8.51□□□□□ -1.05
RC3H1Q5TC82 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC8.51□□□□□ -1.05
RC3H1Q5TC82 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
RC3H1Q5TC82 SMARCE1P4-201ENST00000523647 241 ntBASIC8.51□□□□□ -1.05
RC3H1Q5TC82 AL133399.1-201ENST00000527476 298 ntBASIC8.51□□□□□ -1.05
RC3H1Q5TC82 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC8.51□□□□□ -1.05
RC3H1Q5TC82 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC8.51□□□□□ -1.05
RC3H1Q5TC82 AP003115.1-201ENST00000569849 463 ntBASIC8.51□□□□□ -1.05
RC3H1Q5TC82 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC8.51□□□□□ -1.05
RC3H1Q5TC82 AL589863.1-201ENST00000595383 631 ntBASIC8.51□□□□□ -1.05
RC3H1Q5TC82 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC8.51□□□□□ -1.05
RC3H1Q5TC82 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC8.51□□□□□ -1.05
RC3H1Q5TC82 AL161729.3-201ENST00000603533 673 ntBASIC8.51□□□□□ -1.05
RC3H1Q5TC82 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC8.51□□□□□ -1.05
RC3H1Q5TC82 AC012360.2-201ENST00000609349 391 ntBASIC8.51□□□□□ -1.05
RC3H1Q5TC82 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC8.51□□□□□ -1.05
RC3H1Q5TC82 AC010338.1-201ENST00000621823 717 ntBASIC8.51□□□□□ -1.05
RC3H1Q5TC82 AC007938.1-201ENST00000562524 2902 ntBASIC8.51□□□□□ -1.05
RC3H1Q5TC82 AC007998.4-201ENST00000612496 2533 ntBASIC8.51□□□□□ -1.05
RC3H1Q5TC82 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
RC3H1Q5TC82 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC8.51□□□□□ -1.05
RC3H1Q5TC82 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
RC3H1Q5TC82 PKHD1-201ENST00000340994 11589 ntAPPRIS ALT2 TSL 5 BASIC8.51□□□□□ -1.05
RC3H1Q5TC82 KCNMB2-204ENST00000432997 2552 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
RC3H1Q5TC82 ZNF484-203ENST00000395505 3960 ntAPPRIS ALT2 TSL 2 BASIC8.51□□□□□ -1.05
RC3H1Q5TC82 LINC01793-201ENST00000409590 2036 ntTSL 2 BASIC8.51□□□□□ -1.05
RC3H1Q5TC82 ZNF69-202ENST00000429654 2010 ntAPPRIS P1 TSL 2 BASIC8.51□□□□□ -1.05
RC3H1Q5TC82 GJA1-201ENST00000282561 3037 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
RC3H1Q5TC82 EYA3-208ENST00000540618 5885 ntTSL 2 BASIC8.5□□□□□ -1.05
RC3H1Q5TC82 ARHGEF12-201ENST00000356641 6891 ntTSL 5 BASIC8.5□□□□□ -1.05
RC3H1Q5TC82 GALK2-201ENST00000327171 5299 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
RC3H1Q5TC82 ARCN1-201ENST00000264028 3845 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
RC3H1Q5TC82 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
RC3H1Q5TC82 RPL11P4-201ENST00000332269 436 ntBASIC8.5□□□□□ -1.05
RC3H1Q5TC82 Y_RNA.582-201ENST00000391023 95 ntBASIC8.5□□□□□ -1.05
RC3H1Q5TC82 AL139805.1-201ENST00000407837 289 ntBASIC8.5□□□□□ -1.05
RC3H1Q5TC82 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC8.5□□□□□ -1.05
RC3H1Q5TC82 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC8.5□□□□□ -1.05
RC3H1Q5TC82 HNRNPA1P29-201ENST00000426409 879 ntBASIC8.5□□□□□ -1.05
RC3H1Q5TC82 UBE2V1P3-201ENST00000439651 417 ntBASIC8.5□□□□□ -1.05
RC3H1Q5TC82 AMYP1-201ENST00000440059 1023 ntBASIC8.5□□□□□ -1.05
RC3H1Q5TC82 YWHAZP2-201ENST00000440317 728 ntBASIC8.5□□□□□ -1.05
RC3H1Q5TC82 PMS2P9-201ENST00000441237 515 ntBASIC8.5□□□□□ -1.05
RC3H1Q5TC82 VN1R10P-201ENST00000447106 875 ntBASIC8.5□□□□□ -1.05
RC3H1Q5TC82 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC8.5□□□□□ -1.05
RC3H1Q5TC82 GTF2IP12-201ENST00000456547 356 ntBASIC8.5□□□□□ -1.05
RC3H1Q5TC82 SULT1D1P-201ENST00000458020 882 ntBASIC8.5□□□□□ -1.05
RC3H1Q5TC82 EIF1-203ENST00000469257 2330 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
RC3H1Q5TC82 AC079841.1-201ENST00000481228 950 ntBASIC8.5□□□□□ -1.05
RC3H1Q5TC82 AC114967.1-201ENST00000504890 259 ntBASIC8.5□□□□□ -1.05
RC3H1Q5TC82 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC8.5□□□□□ -1.05
RC3H1Q5TC82 SCARNA5-201ENST00000516201 276 ntBASIC8.5□□□□□ -1.05
RC3H1Q5TC82 RNU6-327P-201ENST00000516270 127 ntBASIC8.5□□□□□ -1.05
RC3H1Q5TC82 AP003072.1-201ENST00000531740 145 ntBASIC8.5□□□□□ -1.05
RC3H1Q5TC82 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC8.5□□□□□ -1.05
RC3H1Q5TC82 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC8.5□□□□□ -1.05
RC3H1Q5TC82 AC125611.2-201ENST00000551907 647 ntBASIC8.5□□□□□ -1.05
RC3H1Q5TC82 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
RC3H1Q5TC82 MIR4528-201ENST00000577763 90 ntBASIC8.5□□□□□ -1.05
RC3H1Q5TC82 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC8.5□□□□□ -1.05
RC3H1Q5TC82 AL138895.2-201ENST00000603019 178 ntBASIC8.5□□□□□ -1.05
RC3H1Q5TC82 BNIP3P11-201ENST00000603878 563 ntBASIC8.5□□□□□ -1.05
RC3H1Q5TC82 AL592148.2-201ENST00000612210 372 ntBASIC8.5□□□□□ -1.05
RC3H1Q5TC82 AL353726.1-201ENST00000614041 1000 ntBASIC8.5□□□□□ -1.05
RC3H1Q5TC82 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC8.5□□□□□ -1.05
RC3H1Q5TC82 AC091834.1-201ENST00000614543 472 ntBASIC8.5□□□□□ -1.05
RC3H1Q5TC82 Six3os1_4.1-201ENST00000615706 324 ntBASIC8.5□□□□□ -1.05
RC3H1Q5TC82 AC012414.7-202ENST00000622705 1090 ntBASIC8.5□□□□□ -1.05
RC3H1Q5TC82 OFCC1-218ENST00000622909 754 ntAPPRIS ALT2 TSL 5 BASIC8.5□□□□□ -1.05
RC3H1Q5TC82 AC073862.4-201ENST00000622982 854 ntBASIC8.5□□□□□ -1.05
RC3H1Q5TC82 AC024475.3-203ENST00000634971 854 ntTSL 5 BASIC8.5□□□□□ -1.05
RC3H1Q5TC82 ADI1-202ENST00000382093 3870 ntTSL 2 BASIC8.5□□□□□ -1.05
RC3H1Q5TC82 CCDC162P-202ENST00000368966 6751 ntBASIC8.5□□□□□ -1.05
RC3H1Q5TC82 EPS15P1-202ENST00000459691 2071 ntBASIC8.5□□□□□ -1.05
RC3H1Q5TC82 AC004672.1-201ENST00000513082 2088 ntTSL 5 BASIC8.5□□□□□ -1.05
RC3H1Q5TC82 LINC01677-204ENST00000635342 1329 ntTSL 5 BASIC8.5□□□□□ -1.05
RC3H1Q5TC82 ZNF600-201ENST00000338230 3829 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
RC3H1Q5TC82 PZP-201ENST00000261336 4610 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
RC3H1Q5TC82 LINC00184-201ENST00000429269 2270 ntTSL 2 BASIC8.5□□□□□ -1.05
RC3H1Q5TC82 Z99129.3-201ENST00000624363 6430 ntTSL 2 BASIC8.5□□□□□ -1.05
RC3H1Q5TC82 PIGN-238ENST00000639758 4239 ntTSL 5 BASIC8.49□□□□□ -1.05
RC3H1Q5TC82 PSD3-220ENST00000615573 5843 ntTSL 5 BASIC8.49□□□□□ -1.05
Retrieved 100 of 98,524 protein–RNA pairs in 70.1 ms