Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC5.52□□□□□ -1.53
PTPN20Q4JDL3 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
PTPN20Q4JDL3 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
PTPN20Q4JDL3 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
PTPN20Q4JDL3 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC5.52□□□□□ -1.53
PTPN20Q4JDL3 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.52□□□□□ -1.53
PTPN20Q4JDL3 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
PTPN20Q4JDL3 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
PTPN20Q4JDL3 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC5.51□□□□□ -1.53
PTPN20Q4JDL3 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC5.51□□□□□ -1.53
PTPN20Q4JDL3 AC235565.1-201ENST00000456962 1325 ntBASIC5.51□□□□□ -1.53
PTPN20Q4JDL3 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
PTPN20Q4JDL3 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
PTPN20Q4JDL3 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
PTPN20Q4JDL3 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
PTPN20Q4JDL3 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
PTPN20Q4JDL3 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.51□□□□□ -1.53
PTPN20Q4JDL3 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.51□□□□□ -1.53
PTPN20Q4JDL3 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
PTPN20Q4JDL3 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.51□□□□□ -1.53
PTPN20Q4JDL3 RNA5SP90-201ENST00000364801 99 ntBASIC5.51□□□□□ -1.53
PTPN20Q4JDL3 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
PTPN20Q4JDL3 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC5.51□□□□□ -1.53
PTPN20Q4JDL3 RPL5P25-201ENST00000441148 775 ntBASIC5.51□□□□□ -1.53
PTPN20Q4JDL3 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC5.51□□□□□ -1.53
PTPN20Q4JDL3 PRPF38AP1-201ENST00000451976 933 ntBASIC5.51□□□□□ -1.53
PTPN20Q4JDL3 Z92846.1-201ENST00000456203 268 ntBASIC5.51□□□□□ -1.53
PTPN20Q4JDL3 RN7SL189P-201ENST00000468631 289 ntBASIC5.51□□□□□ -1.53
PTPN20Q4JDL3 RPS26P39-201ENST00000469206 341 ntBASIC5.51□□□□□ -1.53
PTPN20Q4JDL3 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC5.51□□□□□ -1.53
PTPN20Q4JDL3 RPS4XP20-201ENST00000505751 772 ntBASIC5.51□□□□□ -1.53
PTPN20Q4JDL3 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC5.51□□□□□ -1.53
PTPN20Q4JDL3 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC5.51□□□□□ -1.53
PTPN20Q4JDL3 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
PTPN20Q4JDL3 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
PTPN20Q4JDL3 ASB8-215ENST00000540782 659 ntTSL 3 BASIC5.51□□□□□ -1.53
PTPN20Q4JDL3 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC5.51□□□□□ -1.53
PTPN20Q4JDL3 AL049779.2-201ENST00000553847 315 ntBASIC5.51□□□□□ -1.53
PTPN20Q4JDL3 AC022884.2-201ENST00000578535 580 ntBASIC5.51□□□□□ -1.53
PTPN20Q4JDL3 MIR4489-201ENST00000578869 62 ntBASIC5.51□□□□□ -1.53
PTPN20Q4JDL3 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC5.51□□□□□ -1.53
PTPN20Q4JDL3 UBA2-208ENST00000592791 910 ntTSL 2 BASIC5.51□□□□□ -1.53
PTPN20Q4JDL3 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC5.51□□□□□ -1.53
PTPN20Q4JDL3 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC5.51□□□□□ -1.53
PTPN20Q4JDL3 LSM1P2-201ENST00000604911 322 ntBASIC5.51□□□□□ -1.53
PTPN20Q4JDL3 AP005131.7-201ENST00000610087 611 ntBASIC5.51□□□□□ -1.53
PTPN20Q4JDL3 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
PTPN20Q4JDL3 WWOX-217ENST00000620008 450 ntTSL 2 BASIC5.51□□□□□ -1.53
PTPN20Q4JDL3 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
PTPN20Q4JDL3 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
PTPN20Q4JDL3 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
PTPN20Q4JDL3 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
PTPN20Q4JDL3 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC5.51□□□□□ -1.53
PTPN20Q4JDL3 AC011493.1-201ENST00000596753 1632 ntBASIC5.51□□□□□ -1.53
PTPN20Q4JDL3 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.51□□□□□ -1.53
PTPN20Q4JDL3 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.51□□□□□ -1.53
PTPN20Q4JDL3 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
PTPN20Q4JDL3 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
PTPN20Q4JDL3 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
PTPN20Q4JDL3 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
PTPN20Q4JDL3 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
PTPN20Q4JDL3 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC5.5□□□□□ -1.53
PTPN20Q4JDL3 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.5□□□□□ -1.53
PTPN20Q4JDL3 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
PTPN20Q4JDL3 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
PTPN20Q4JDL3 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.5□□□□□ -1.53
PTPN20Q4JDL3 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC5.5□□□□□ -1.53
PTPN20Q4JDL3 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
PTPN20Q4JDL3 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
PTPN20Q4JDL3 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
PTPN20Q4JDL3 RNU1-74P-201ENST00000384108 171 ntBASIC5.5□□□□□ -1.53
PTPN20Q4JDL3 SEPT7P2-202ENST00000398921 823 ntBASIC5.5□□□□□ -1.53
PTPN20Q4JDL3 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.5□□□□□ -1.53
PTPN20Q4JDL3 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC5.5□□□□□ -1.53
PTPN20Q4JDL3 OR52B5P-201ENST00000435337 951 ntBASIC5.5□□□□□ -1.53
PTPN20Q4JDL3 AC245047.2-201ENST00000441060 530 ntBASIC5.5□□□□□ -1.53
PTPN20Q4JDL3 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC5.5□□□□□ -1.53
PTPN20Q4JDL3 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
PTPN20Q4JDL3 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
PTPN20Q4JDL3 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
PTPN20Q4JDL3 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
PTPN20Q4JDL3 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC5.5□□□□□ -1.53
PTPN20Q4JDL3 AC118658.2-201ENST00000618697 459 ntBASIC5.5□□□□□ -1.53
PTPN20Q4JDL3 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC5.5□□□□□ -1.53
PTPN20Q4JDL3 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
PTPN20Q4JDL3 AC091932.2-201ENST00000623014 291 ntBASIC5.5□□□□□ -1.53
PTPN20Q4JDL3 OR52B5P-202ENST00000641118 1110 ntBASIC5.5□□□□□ -1.53
PTPN20Q4JDL3 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.5□□□□□ -1.53
PTPN20Q4JDL3 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
PTPN20Q4JDL3 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
PTPN20Q4JDL3 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC5.5□□□□□ -1.53
PTPN20Q4JDL3 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
PTPN20Q4JDL3 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
PTPN20Q4JDL3 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
PTPN20Q4JDL3 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.5□□□□□ -1.53
PTPN20Q4JDL3 SMG1P7-201ENST00000565246 2704 ntBASIC5.5□□□□□ -1.53
PTPN20Q4JDL3 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
PTPN20Q4JDL3 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
PTPN20Q4JDL3 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.5□□□□□ -1.53
PTPN20Q4JDL3 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms