Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
CDK3Q00526 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
CDK3Q00526 BCORP1-203ENST00000513194 5093 ntBASIC5.41□□□□□ -1.54
CDK3Q00526 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.41□□□□□ -1.54
CDK3Q00526 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.41□□□□□ -1.54
CDK3Q00526 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
CDK3Q00526 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
CDK3Q00526 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
CDK3Q00526 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
CDK3Q00526 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
CDK3Q00526 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
CDK3Q00526 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC5.4□□□□□ -1.54
CDK3Q00526 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
CDK3Q00526 OFD1P8Y-201ENST00000449148 1433 ntBASIC5.4□□□□□ -1.54
CDK3Q00526 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.54
CDK3Q00526 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
CDK3Q00526 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
CDK3Q00526 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.4□□□□□ -1.54
CDK3Q00526 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
CDK3Q00526 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.4□□□□□ -1.54
CDK3Q00526 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC5.4□□□□□ -1.54
CDK3Q00526 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
CDK3Q00526 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC5.4□□□□□ -1.54
CDK3Q00526 MIR421-201ENST00000365696 85 ntBASIC5.4□□□□□ -1.54
CDK3Q00526 TANK-203ENST00000402568 878 ntTSL 5 BASIC5.4□□□□□ -1.54
CDK3Q00526 MIR1178-201ENST00000408396 91 ntBASIC5.4□□□□□ -1.54
CDK3Q00526 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC5.4□□□□□ -1.54
CDK3Q00526 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
CDK3Q00526 GSTM5P1-201ENST00000434751 660 ntBASIC5.4□□□□□ -1.54
CDK3Q00526 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC5.4□□□□□ -1.54
CDK3Q00526 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC5.4□□□□□ -1.54
CDK3Q00526 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC5.4□□□□□ -1.54
CDK3Q00526 AL672138.1-201ENST00000450604 1015 ntBASIC5.4□□□□□ -1.54
CDK3Q00526 AL606490.1-201ENST00000452266 765 ntBASIC5.4□□□□□ -1.54
CDK3Q00526 MTND6P32-201ENST00000457611 483 ntBASIC5.4□□□□□ -1.54
CDK3Q00526 snoU13.29-201ENST00000459370 104 ntBASIC5.4□□□□□ -1.54
CDK3Q00526 RN7SL188P-201ENST00000469842 285 ntBASIC5.4□□□□□ -1.54
CDK3Q00526 RPL7P39-201ENST00000481157 744 ntBASIC5.4□□□□□ -1.54
CDK3Q00526 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC5.4□□□□□ -1.54
CDK3Q00526 AC024558.1-201ENST00000505008 528 ntBASIC5.4□□□□□ -1.54
CDK3Q00526 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC5.4□□□□□ -1.54
CDK3Q00526 HMGB1P44-201ENST00000508597 572 ntBASIC5.4□□□□□ -1.54
CDK3Q00526 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC5.4□□□□□ -1.54
CDK3Q00526 RNA5SP34-201ENST00000516887 130 ntBASIC5.4□□□□□ -1.54
CDK3Q00526 SCARNA16.4-201ENST00000516956 187 ntBASIC5.4□□□□□ -1.54
CDK3Q00526 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC5.4□□□□□ -1.54
CDK3Q00526 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC5.4□□□□□ -1.54
CDK3Q00526 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC5.4□□□□□ -1.54
CDK3Q00526 AC126177.5-201ENST00000549599 178 ntBASIC5.4□□□□□ -1.54
CDK3Q00526 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC5.4□□□□□ -1.54
CDK3Q00526 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC5.4□□□□□ -1.54
CDK3Q00526 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC5.4□□□□□ -1.54
CDK3Q00526 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC5.4□□□□□ -1.54
CDK3Q00526 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC5.4□□□□□ -1.54
CDK3Q00526 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC5.4□□□□□ -1.54
CDK3Q00526 MIR1269B-201ENST00000580405 75 ntBASIC5.4□□□□□ -1.54
CDK3Q00526 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
CDK3Q00526 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC5.4□□□□□ -1.54
CDK3Q00526 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC5.4□□□□□ -1.54
CDK3Q00526 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC5.4□□□□□ -1.54
CDK3Q00526 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
CDK3Q00526 AC008115.4-201ENST00000619780 775 ntBASIC5.4□□□□□ -1.54
CDK3Q00526 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC5.4□□□□□ -1.54
CDK3Q00526 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC5.4□□□□□ -1.54
CDK3Q00526 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC5.4□□□□□ -1.54
CDK3Q00526 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.54
CDK3Q00526 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
CDK3Q00526 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.4□□□□□ -1.55
CDK3Q00526 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.4□□□□□ -1.55
CDK3Q00526 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
CDK3Q00526 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
CDK3Q00526 AC235565.1-201ENST00000456962 1325 ntBASIC5.4□□□□□ -1.55
CDK3Q00526 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.55
CDK3Q00526 BX284613.1-201ENST00000452221 1641 ntBASIC5.4□□□□□ -1.55
CDK3Q00526 ALB-220ENST00000621628 1606 ntTSL 5 BASIC5.4□□□□□ -1.55
CDK3Q00526 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
CDK3Q00526 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
CDK3Q00526 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC5.4□□□□□ -1.55
CDK3Q00526 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC5.4□□□□□ -1.55
CDK3Q00526 MTND4P21-201ENST00000453886 1357 ntBASIC5.4□□□□□ -1.55
CDK3Q00526 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
CDK3Q00526 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
CDK3Q00526 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
CDK3Q00526 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
CDK3Q00526 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
CDK3Q00526 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
CDK3Q00526 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
CDK3Q00526 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CDK3Q00526 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CDK3Q00526 AC018628.1-201ENST00000624147 3819 ntBASIC5.39□□□□□ -1.55
CDK3Q00526 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CDK3Q00526 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC5.39□□□□□ -1.55
CDK3Q00526 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.39□□□□□ -1.55
CDK3Q00526 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CDK3Q00526 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CDK3Q00526 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CDK3Q00526 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC5.39□□□□□ -1.55
CDK3Q00526 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC5.39□□□□□ -1.55
CDK3Q00526 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CDK3Q00526 OR9K1P-201ENST00000326513 941 ntBASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 211.3 ms