Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 AC015908.1-201ENST00000478739 476 ntBASIC4.53□□□□□ -1.68
LMO4P61968 AC093270.2-201ENST00000486157 792 ntBASIC4.53□□□□□ -1.68
LMO4P61968 RPL15P21-201ENST00000495592 567 ntBASIC4.53□□□□□ -1.68
LMO4P61968 AC119751.4-201ENST00000507498 357 ntBASIC4.53□□□□□ -1.68
LMO4P61968 AC106806.2-201ENST00000509365 500 ntBASIC4.53□□□□□ -1.68
LMO4P61968 OR5AM1P-201ENST00000532136 1032 ntBASIC4.53□□□□□ -1.68
LMO4P61968 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC4.53□□□□□ -1.68
LMO4P61968 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC4.53□□□□□ -1.68
LMO4P61968 AC009063.2-203ENST00000567860 745 ntTSL 2 BASIC4.53□□□□□ -1.68
LMO4P61968 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC4.53□□□□□ -1.68
LMO4P61968 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC4.53□□□□□ -1.68
LMO4P61968 AL121612.2-201ENST00000612261 482 ntBASIC4.53□□□□□ -1.68
LMO4P61968 AL139407.1-201ENST00000613826 1175 ntBASIC4.53□□□□□ -1.68
LMO4P61968 AC108359.1-201ENST00000616451 1211 ntBASIC4.53□□□□□ -1.68
LMO4P61968 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
LMO4P61968 AC009269.6-201ENST00000621778 588 ntBASIC4.53□□□□□ -1.68
LMO4P61968 MIR6730-201ENST00000622213 67 ntBASIC4.53□□□□□ -1.68
LMO4P61968 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC4.53□□□□□ -1.68
LMO4P61968 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC4.53□□□□□ -1.68
LMO4P61968 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
LMO4P61968 KIF1B-204ENST00000377086 10669 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
LMO4P61968 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
LMO4P61968 OR4F13P-202ENST00000560066 2054 ntBASIC4.53□□□□□ -1.68
LMO4P61968 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
LMO4P61968 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
LMO4P61968 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
LMO4P61968 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
LMO4P61968 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC4.53□□□□□ -1.68
LMO4P61968 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
LMO4P61968 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC4.53□□□□□ -1.69
LMO4P61968 EEF1A1P33-201ENST00000554413 1362 ntBASIC4.53□□□□□ -1.69
LMO4P61968 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC4.52□□□□□ -1.69
LMO4P61968 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
LMO4P61968 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
LMO4P61968 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
LMO4P61968 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC4.52□□□□□ -1.69
LMO4P61968 SNORA67-201ENST00000384423 137 ntBASIC4.52□□□□□ -1.69
LMO4P61968 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC4.52□□□□□ -1.69
LMO4P61968 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC4.52□□□□□ -1.69
LMO4P61968 RPSAP35-201ENST00000413753 818 ntBASIC4.52□□□□□ -1.69
LMO4P61968 MTND4LP17-201ENST00000414607 293 ntBASIC4.52□□□□□ -1.69
LMO4P61968 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC4.52□□□□□ -1.69
LMO4P61968 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC4.52□□□□□ -1.69
LMO4P61968 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC4.52□□□□□ -1.69
LMO4P61968 MTCYBP15-201ENST00000433123 1127 ntBASIC4.52□□□□□ -1.69
LMO4P61968 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
LMO4P61968 AL392003.1-201ENST00000434394 243 ntBASIC4.52□□□□□ -1.69
LMO4P61968 GSTM5P1-201ENST00000434751 660 ntBASIC4.52□□□□□ -1.69
LMO4P61968 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC4.52□□□□□ -1.69
LMO4P61968 KRT8P51-201ENST00000438938 274 ntBASIC4.52□□□□□ -1.69
LMO4P61968 SNORD125-201ENST00000459538 96 ntBASIC4.52□□□□□ -1.69
LMO4P61968 AC114322.1-201ENST00000506771 926 ntBASIC4.52□□□□□ -1.69
LMO4P61968 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC4.52□□□□□ -1.69
LMO4P61968 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC4.52□□□□□ -1.69
LMO4P61968 RNU6-941P-201ENST00000516346 108 ntBASIC4.52□□□□□ -1.69
LMO4P61968 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
LMO4P61968 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC4.52□□□□□ -1.69
LMO4P61968 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC4.52□□□□□ -1.69
LMO4P61968 AC008126.1-201ENST00000549019 480 ntBASIC4.52□□□□□ -1.69
LMO4P61968 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC4.52□□□□□ -1.69
LMO4P61968 HMGN2P6-201ENST00000551091 273 ntBASIC4.52□□□□□ -1.69
LMO4P61968 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC4.52□□□□□ -1.69
LMO4P61968 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC4.52□□□□□ -1.69
LMO4P61968 AC023158.1-201ENST00000561632 1025 ntBASIC4.52□□□□□ -1.69
LMO4P61968 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC4.52□□□□□ -1.69
LMO4P61968 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
LMO4P61968 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC4.52□□□□□ -1.69
LMO4P61968 AL391834.1-201ENST00000609609 560 ntBASIC4.52□□□□□ -1.69
LMO4P61968 AL391834.2-201ENST00000609982 546 ntBASIC4.52□□□□□ -1.69
LMO4P61968 AL512506.1-201ENST00000613918 449 ntBASIC4.52□□□□□ -1.69
LMO4P61968 RPSAP73-201ENST00000614820 330 ntBASIC4.52□□□□□ -1.69
LMO4P61968 AC118658.2-201ENST00000618697 459 ntBASIC4.52□□□□□ -1.69
LMO4P61968 AP002505.2-201ENST00000623585 696 ntBASIC4.52□□□□□ -1.69
LMO4P61968 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC4.52□□□□□ -1.69
LMO4P61968 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC4.52□□□□□ -1.69
LMO4P61968 AC074101.1-201ENST00000637861 241 ntBASIC4.52□□□□□ -1.69
LMO4P61968 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC4.52□□□□□ -1.69
LMO4P61968 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
LMO4P61968 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
LMO4P61968 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
LMO4P61968 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
LMO4P61968 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC4.52□□□□□ -1.69
LMO4P61968 AC007342.5-201ENST00000571340 2142 ntBASIC4.52□□□□□ -1.69
LMO4P61968 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC4.52□□□□□ -1.69
LMO4P61968 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
LMO4P61968 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC4.52□□□□□ -1.69
LMO4P61968 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
LMO4P61968 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC4.52□□□□□ -1.69
LMO4P61968 NF1-201ENST00000356175 12362 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
LMO4P61968 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC4.52□□□□□ -1.69
LMO4P61968 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC4.52□□□□□ -1.69
LMO4P61968 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
LMO4P61968 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC4.51□□□□□ -1.69
LMO4P61968 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
LMO4P61968 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
LMO4P61968 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
LMO4P61968 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC4.51□□□□□ -1.69
LMO4P61968 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
LMO4P61968 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
LMO4P61968 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 88.3 ms