Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 CD24P2-201ENST00000565486 219 ntBASIC4.46□□□□□ -1.7
SPCS3P61009 RN7SL290P-201ENST00000578661 300 ntBASIC4.46□□□□□ -1.7
SPCS3P61009 AC090312.1-201ENST00000580637 348 ntBASIC4.46□□□□□ -1.7
SPCS3P61009 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC4.46□□□□□ -1.7
SPCS3P61009 AC009237.13-201ENST00000603193 276 ntBASIC4.46□□□□□ -1.7
SPCS3P61009 AC124916.2-201ENST00000604416 224 ntBASIC4.46□□□□□ -1.7
SPCS3P61009 OR7M1P-201ENST00000608946 533 ntBASIC4.46□□□□□ -1.7
SPCS3P61009 uc_338.29-201ENST00000615099 168 ntBASIC4.46□□□□□ -1.7
SPCS3P61009 RNU6-368P-201ENST00000620928 107 ntBASIC4.46□□□□□ -1.7
SPCS3P61009 RNU6-538P-201ENST00000622329 107 ntBASIC4.46□□□□□ -1.7
SPCS3P61009 AC079298.2-201ENST00000623885 459 ntBASIC4.46□□□□□ -1.7
SPCS3P61009 AC022919.1-201ENST00000624979 626 ntBASIC4.46□□□□□ -1.7
SPCS3P61009 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC4.46□□□□□ -1.7
SPCS3P61009 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC4.46□□□□□ -1.7
SPCS3P61009 OR56A4-203ENST00000641279 1209 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
SPCS3P61009 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.46□□□□□ -1.7
SPCS3P61009 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
SPCS3P61009 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC4.46□□□□□ -1.7
SPCS3P61009 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.7
SPCS3P61009 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
SPCS3P61009 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC4.46□□□□□ -1.7
SPCS3P61009 AC018529.3-201ENST00000624212 2254 ntBASIC4.46□□□□□ -1.7
SPCS3P61009 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.45□□□□□ -1.7
SPCS3P61009 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
SPCS3P61009 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
SPCS3P61009 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC4.45□□□□□ -1.7
SPCS3P61009 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
SPCS3P61009 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
SPCS3P61009 AC100757.1-201ENST00000616872 1835 ntBASIC4.45□□□□□ -1.7
SPCS3P61009 AC007996.1-201ENST00000620414 2821 ntBASIC4.45□□□□□ -1.7
SPCS3P61009 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC4.45□□□□□ -1.7
SPCS3P61009 AMELX-201ENST00000348912 737 ntTSL 5 BASIC4.45□□□□□ -1.7
SPCS3P61009 RN7SKP184-201ENST00000362348 333 ntBASIC4.45□□□□□ -1.7
SPCS3P61009 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
SPCS3P61009 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC4.45□□□□□ -1.7
SPCS3P61009 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC4.45□□□□□ -1.7
SPCS3P61009 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC4.45□□□□□ -1.7
SPCS3P61009 AL034417.1-201ENST00000399343 800 ntBASIC4.45□□□□□ -1.7
SPCS3P61009 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC4.45□□□□□ -1.7
SPCS3P61009 MIR4435-2HG-203ENST00000409569 514 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
SPCS3P61009 RN7SKP86-201ENST00000410454 332 ntBASIC4.45□□□□□ -1.7
SPCS3P61009 AL354890.1-201ENST00000413730 346 ntBASIC4.45□□□□□ -1.7
SPCS3P61009 AL359885.1-201ENST00000415786 903 ntBASIC4.45□□□□□ -1.7
SPCS3P61009 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC4.45□□□□□ -1.7
SPCS3P61009 LINC01728-201ENST00000428529 524 ntTSL 2 BASIC4.45□□□□□ -1.7
SPCS3P61009 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC4.45□□□□□ -1.7
SPCS3P61009 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC4.45□□□□□ -1.7
SPCS3P61009 GTF3AP5-201ENST00000442645 697 ntBASIC4.45□□□□□ -1.7
SPCS3P61009 AL138921.1-201ENST00000444359 846 ntTSL 5 BASIC4.45□□□□□ -1.7
SPCS3P61009 GEMIN8P3-201ENST00000445417 720 ntBASIC4.45□□□□□ -1.7
SPCS3P61009 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC4.45□□□□□ -1.7
SPCS3P61009 GAS5-218ENST00000448718 565 ntTSL 2 BASIC4.45□□□□□ -1.7
SPCS3P61009 KF459542.1-201ENST00000450908 553 ntBASIC4.45□□□□□ -1.7
SPCS3P61009 OR52E3P-201ENST00000452083 936 ntBASIC4.45□□□□□ -1.7
SPCS3P61009 UBFD1P1-201ENST00000473259 814 ntBASIC4.45□□□□□ -1.7
SPCS3P61009 RN7SL568P-201ENST00000493069 298 ntBASIC4.45□□□□□ -1.7
SPCS3P61009 AC106822.1-201ENST00000502647 526 ntBASIC4.45□□□□□ -1.7
SPCS3P61009 NDUFB4P12-201ENST00000513465 390 ntBASIC4.45□□□□□ -1.7
SPCS3P61009 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC4.45□□□□□ -1.7
SPCS3P61009 IGLV3-30-201ENST00000524362 298 ntBASIC4.45□□□□□ -1.7
SPCS3P61009 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC4.45□□□□□ -1.7
SPCS3P61009 MED21-206ENST00000546323 575 ntTSL 3 BASIC4.45□□□□□ -1.7
SPCS3P61009 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC4.45□□□□□ -1.7
SPCS3P61009 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC4.45□□□□□ -1.7
SPCS3P61009 AC121758.1-202ENST00000556917 658 ntBASIC4.45□□□□□ -1.7
SPCS3P61009 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC4.45□□□□□ -1.7
SPCS3P61009 HMGB3P26-201ENST00000560051 582 ntBASIC4.45□□□□□ -1.7
SPCS3P61009 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC4.45□□□□□ -1.7
SPCS3P61009 RPGRIP1L-208ENST00000566096 893 ntTSL 2 BASIC4.45□□□□□ -1.7
SPCS3P61009 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC4.45□□□□□ -1.7
SPCS3P61009 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC4.45□□□□□ -1.7
SPCS3P61009 RN7SL176P-201ENST00000580352 264 ntBASIC4.45□□□□□ -1.7
SPCS3P61009 MIR4502-201ENST00000580432 81 ntBASIC4.45□□□□□ -1.7
SPCS3P61009 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC4.45□□□□□ -1.7
SPCS3P61009 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
SPCS3P61009 AC063977.5-201ENST00000601044 974 ntBASIC4.45□□□□□ -1.7
SPCS3P61009 AC011500.1-201ENST00000601963 469 ntBASIC4.45□□□□□ -1.7
SPCS3P61009 AP001437.1-201ENST00000608783 456 ntBASIC4.45□□□□□ -1.7
SPCS3P61009 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC4.45□□□□□ -1.7
SPCS3P61009 AC026367.3-201ENST00000619032 590 ntBASIC4.45□□□□□ -1.7
SPCS3P61009 AC015908.5-201ENST00000623289 343 ntBASIC4.45□□□□□ -1.7
SPCS3P61009 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC4.45□□□□□ -1.7
SPCS3P61009 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
SPCS3P61009 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
SPCS3P61009 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC4.45□□□□□ -1.7
SPCS3P61009 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
SPCS3P61009 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
SPCS3P61009 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
SPCS3P61009 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC4.45□□□□□ -1.7
SPCS3P61009 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
SPCS3P61009 AC112255.1-201ENST00000624070 2493 ntBASIC4.45□□□□□ -1.7
SPCS3P61009 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
SPCS3P61009 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
SPCS3P61009 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
SPCS3P61009 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
SPCS3P61009 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC4.44□□□□□ -1.7
SPCS3P61009 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
SPCS3P61009 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
SPCS3P61009 TET1P1-201ENST00000426627 2301 ntBASIC4.44□□□□□ -1.7
SPCS3P61009 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 91.1 ms