Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.51□□□□□ -1.53
CDH6P55285 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC5.51□□□□□ -1.53
CDH6P55285 AC011445.2-201ENST00000599274 173 ntBASIC5.51□□□□□ -1.53
CDH6P55285 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC5.51□□□□□ -1.53
CDH6P55285 FAM72A-208ENST00000607379 1139 ntBASIC5.51□□□□□ -1.53
CDH6P55285 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CDH6P55285 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC5.51□□□□□ -1.53
CDH6P55285 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CDH6P55285 SAMMSON-209ENST00000641222 1100 ntBASIC5.51□□□□□ -1.53
CDH6P55285 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
CDH6P55285 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
CDH6P55285 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC5.51□□□□□ -1.53
CDH6P55285 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.51□□□□□ -1.53
CDH6P55285 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
CDH6P55285 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CDH6P55285 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC5.51□□□□□ -1.53
CDH6P55285 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CDH6P55285 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
CDH6P55285 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CDH6P55285 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
CDH6P55285 AC093849.1-201ENST00000563631 2209 ntBASIC5.5□□□□□ -1.53
CDH6P55285 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
CDH6P55285 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC5.5□□□□□ -1.53
CDH6P55285 MIR105-1-201ENST00000385222 81 ntBASIC5.5□□□□□ -1.53
CDH6P55285 ZSCAN12P1-201ENST00000406489 419 ntBASIC5.5□□□□□ -1.53
CDH6P55285 AL512422.1-201ENST00000407033 553 ntBASIC5.5□□□□□ -1.53
CDH6P55285 RNU6ATAC18P-201ENST00000408413 101 ntBASIC5.5□□□□□ -1.53
CDH6P55285 OR3A2-201ENST00000408891 1076 ntBASIC5.5□□□□□ -1.53
CDH6P55285 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CDH6P55285 CBX1P3-201ENST00000413296 527 ntBASIC5.5□□□□□ -1.53
CDH6P55285 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC5.5□□□□□ -1.53
CDH6P55285 LINC00434-201ENST00000423739 419 ntTSL 3 BASIC5.5□□□□□ -1.53
CDH6P55285 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC5.5□□□□□ -1.53
CDH6P55285 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC5.5□□□□□ -1.53
CDH6P55285 CYCSP6-201ENST00000434498 302 ntBASIC5.5□□□□□ -1.53
CDH6P55285 AL391987.1-201ENST00000441025 200 ntBASIC5.5□□□□□ -1.53
CDH6P55285 RPS11P7-201ENST00000442125 465 ntBASIC5.5□□□□□ -1.53
CDH6P55285 NOP56P2-201ENST00000447491 769 ntBASIC5.5□□□□□ -1.53
CDH6P55285 AC079168.1-201ENST00000458741 345 ntBASIC5.5□□□□□ -1.53
CDH6P55285 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CDH6P55285 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC5.5□□□□□ -1.53
CDH6P55285 RPEP1-201ENST00000504507 658 ntBASIC5.5□□□□□ -1.53
CDH6P55285 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC5.5□□□□□ -1.53
CDH6P55285 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC5.5□□□□□ -1.53
CDH6P55285 AC016559.2-201ENST00000510759 359 ntBASIC5.5□□□□□ -1.53
CDH6P55285 RNA5SP362-201ENST00000516048 118 ntBASIC5.5□□□□□ -1.53
CDH6P55285 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC5.5□□□□□ -1.53
CDH6P55285 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC5.5□□□□□ -1.53
CDH6P55285 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC5.5□□□□□ -1.53
CDH6P55285 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC5.5□□□□□ -1.53
CDH6P55285 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC5.5□□□□□ -1.53
CDH6P55285 DISC1FP1-203ENST00000562678 796 ntTSL 3 BASIC5.5□□□□□ -1.53
CDH6P55285 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC5.5□□□□□ -1.53
CDH6P55285 MTCYBP13-201ENST00000578634 1093 ntBASIC5.5□□□□□ -1.53
CDH6P55285 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC5.5□□□□□ -1.53
CDH6P55285 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC5.5□□□□□ -1.53
CDH6P55285 MIR6839-201ENST00000620425 113 ntBASIC5.5□□□□□ -1.53
CDH6P55285 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC5.5□□□□□ -1.53
CDH6P55285 AC091932.2-201ENST00000623014 291 ntBASIC5.5□□□□□ -1.53
CDH6P55285 MIR4302-201ENST00000638058 60 ntBASIC5.5□□□□□ -1.53
CDH6P55285 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
CDH6P55285 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
CDH6P55285 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CDH6P55285 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC5.5□□□□□ -1.53
CDH6P55285 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
CDH6P55285 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC5.49□□□□□ -1.53
CDH6P55285 CA1-225ENST00000626824 2405 ntTSL 5 BASIC5.49□□□□□ -1.53
CDH6P55285 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
CDH6P55285 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC5.49□□□□□ -1.53
CDH6P55285 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CDH6P55285 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CDH6P55285 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CDH6P55285 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.49□□□□□ -1.53
CDH6P55285 CYCSP12-201ENST00000437729 300 ntBASIC5.49□□□□□ -1.53
CDH6P55285 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC5.49□□□□□ -1.53
CDH6P55285 SPRYD7P1-201ENST00000443861 570 ntBASIC5.49□□□□□ -1.53
CDH6P55285 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC5.49□□□□□ -1.53
CDH6P55285 AC007386.1-201ENST00000455212 582 ntBASIC5.49□□□□□ -1.53
CDH6P55285 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC5.49□□□□□ -1.53
CDH6P55285 RPL7P40-201ENST00000481703 745 ntBASIC5.49□□□□□ -1.53
CDH6P55285 RN7SL814P-201ENST00000487715 300 ntBASIC5.49□□□□□ -1.53
CDH6P55285 RN7SL184P-201ENST00000488308 297 ntBASIC5.49□□□□□ -1.53
CDH6P55285 RN7SL101P-201ENST00000496350 279 ntBASIC5.49□□□□□ -1.53
CDH6P55285 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC5.49□□□□□ -1.53
CDH6P55285 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC5.49□□□□□ -1.53
CDH6P55285 EIF3KP3-201ENST00000514461 639 ntBASIC5.49□□□□□ -1.53
CDH6P55285 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC5.49□□□□□ -1.53
CDH6P55285 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC5.49□□□□□ -1.53
CDH6P55285 AC027369.5-201ENST00000533838 755 ntBASIC5.49□□□□□ -1.53
CDH6P55285 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC5.49□□□□□ -1.53
CDH6P55285 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC5.49□□□□□ -1.53
CDH6P55285 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC5.49□□□□□ -1.53
CDH6P55285 RPL10P14-201ENST00000565265 298 ntBASIC5.49□□□□□ -1.53
CDH6P55285 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CDH6P55285 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC5.49□□□□□ -1.53
CDH6P55285 PRPF19P1-201ENST00000584766 898 ntBASIC5.49□□□□□ -1.53
CDH6P55285 AC002069.2-201ENST00000603580 883 ntBASIC5.49□□□□□ -1.53
CDH6P55285 AC009597.2-201ENST00000604659 592 ntBASIC5.49□□□□□ -1.53
CDH6P55285 AL162431.4-201ENST00000604674 411 ntBASIC5.49□□□□□ -1.53
CDH6P55285 AC011626.1-201ENST00000604710 562 ntBASIC5.49□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 93.9 ms