Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 RNU6ATAC18P-201ENST00000408413 101 ntBASIC5.93□□□□□ -1.46
VCPP55072 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC5.93□□□□□ -1.46
VCPP55072 OR10T1P-201ENST00000424327 947 ntBASIC5.93□□□□□ -1.46
VCPP55072 AC113412.1-201ENST00000425840 504 ntBASIC5.93□□□□□ -1.46
VCPP55072 AL049745.1-201ENST00000433953 286 ntBASIC5.93□□□□□ -1.46
VCPP55072 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC5.93□□□□□ -1.46
VCPP55072 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC5.93□□□□□ -1.46
VCPP55072 RPS26P41-201ENST00000450370 284 ntBASIC5.93□□□□□ -1.46
VCPP55072 AC091153.1-201ENST00000466297 402 ntBASIC5.93□□□□□ -1.46
VCPP55072 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC5.93□□□□□ -1.46
VCPP55072 RN7SL346P-201ENST00000491561 294 ntBASIC5.93□□□□□ -1.46
VCPP55072 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC5.93□□□□□ -1.46
VCPP55072 USP9YP2-201ENST00000504503 1000 ntBASIC5.93□□□□□ -1.46
VCPP55072 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC5.93□□□□□ -1.46
VCPP55072 USP9YP1-201ENST00000513521 1002 ntBASIC5.93□□□□□ -1.46
VCPP55072 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC5.93□□□□□ -1.46
VCPP55072 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC5.93□□□□□ -1.46
VCPP55072 IGHVIII-76-1-201ENST00000523776 286 ntBASIC5.93□□□□□ -1.46
VCPP55072 AP001922.4-201ENST00000526967 290 ntBASIC5.93□□□□□ -1.46
VCPP55072 AC022832.1-201ENST00000530718 645 ntBASIC5.93□□□□□ -1.46
VCPP55072 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC5.93□□□□□ -1.46
VCPP55072 AC137627.1-201ENST00000545761 289 ntBASIC5.93□□□□□ -1.46
VCPP55072 AC139697.1-201ENST00000548429 745 ntBASIC5.93□□□□□ -1.46
VCPP55072 OR11J2P-201ENST00000555298 907 ntBASIC5.93□□□□□ -1.46
VCPP55072 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC5.93□□□□□ -1.46
VCPP55072 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC5.93□□□□□ -1.46
VCPP55072 FAM25E-202ENST00000608562 189 ntBASIC5.93□□□□□ -1.46
VCPP55072 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC5.93□□□□□ -1.46
VCPP55072 AC091953.3-201ENST00000623220 236 ntBASIC5.93□□□□□ -1.46
VCPP55072 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
VCPP55072 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
VCPP55072 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
VCPP55072 AC004158.1-201ENST00000564508 4319 ntBASIC5.93□□□□□ -1.46
VCPP55072 AC068870.3-201ENST00000625077 2536 ntBASIC5.93□□□□□ -1.46
VCPP55072 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
VCPP55072 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
VCPP55072 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.93□□□□□ -1.46
VCPP55072 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC5.93□□□□□ -1.46
VCPP55072 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
VCPP55072 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
VCPP55072 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.92□□□□□ -1.46
VCPP55072 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
VCPP55072 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
VCPP55072 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC5.92□□□□□ -1.46
VCPP55072 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.92□□□□□ -1.46
VCPP55072 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
VCPP55072 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
VCPP55072 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
VCPP55072 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
VCPP55072 ADAM24P-201ENST00000398655 2101 ntBASIC5.92□□□□□ -1.46
VCPP55072 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
VCPP55072 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC5.92□□□□□ -1.46
VCPP55072 CA1-225ENST00000626824 2405 ntTSL 5 BASIC5.92□□□□□ -1.46
VCPP55072 MIR130A-201ENST00000385274 89 ntBASIC5.92□□□□□ -1.46
VCPP55072 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
VCPP55072 AL133173.1-201ENST00000423458 397 ntBASIC5.92□□□□□ -1.46
VCPP55072 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
VCPP55072 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC5.92□□□□□ -1.46
VCPP55072 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC5.92□□□□□ -1.46
VCPP55072 DUTP1-201ENST00000493631 470 ntBASIC5.92□□□□□ -1.46
VCPP55072 AC090638.1-201ENST00000498296 909 ntBASIC5.92□□□□□ -1.46
VCPP55072 RNU6ATAC24P-201ENST00000516811 135 ntBASIC5.92□□□□□ -1.46
VCPP55072 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC5.92□□□□□ -1.46
VCPP55072 AC018552.1-201ENST00000562099 811 ntBASIC5.92□□□□□ -1.46
VCPP55072 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC5.92□□□□□ -1.46
VCPP55072 AC126915.2-201ENST00000610957 190 ntBASIC5.92□□□□□ -1.46
VCPP55072 AP002505.2-201ENST00000623585 696 ntBASIC5.92□□□□□ -1.46
VCPP55072 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
VCPP55072 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC5.92□□□□□ -1.46
VCPP55072 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
VCPP55072 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.92□□□□□ -1.46
VCPP55072 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
VCPP55072 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.92□□□□□ -1.46
VCPP55072 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
VCPP55072 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC5.92□□□□□ -1.46
VCPP55072 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.91□□□□□ -1.46
VCPP55072 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
VCPP55072 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC5.91□□□□□ -1.46
VCPP55072 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC5.91□□□□□ -1.46
VCPP55072 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
VCPP55072 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.91□□□□□ -1.46
VCPP55072 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.91□□□□□ -1.46
VCPP55072 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
VCPP55072 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
VCPP55072 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
VCPP55072 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC5.91□□□□□ -1.46
VCPP55072 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC5.91□□□□□ -1.46
VCPP55072 FTLP19-201ENST00000433300 394 ntBASIC5.91□□□□□ -1.46
VCPP55072 RPS29P33-201ENST00000456717 146 ntBASIC5.91□□□□□ -1.46
VCPP55072 LDHBP2-201ENST00000456969 1005 ntBASIC5.91□□□□□ -1.46
VCPP55072 SNORD125-201ENST00000459538 96 ntBASIC5.91□□□□□ -1.46
VCPP55072 RN7SL51P-201ENST00000468230 285 ntBASIC5.91□□□□□ -1.46
VCPP55072 AC083982.1-201ENST00000485679 344 ntBASIC5.91□□□□□ -1.46
VCPP55072 RPS17P5-201ENST00000498293 408 ntBASIC5.91□□□□□ -1.46
VCPP55072 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC5.91□□□□□ -1.46
VCPP55072 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC5.91□□□□□ -1.46
VCPP55072 AC022140.1-201ENST00000511029 565 ntTSL 3 BASIC5.91□□□□□ -1.46
VCPP55072 RERGL-203ENST00000538724 973 ntAPPRIS P1 TSL 2 BASIC5.91□□□□□ -1.46
VCPP55072 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC5.91□□□□□ -1.46
VCPP55072 HSPE1P2-201ENST00000554777 306 ntBASIC5.91□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 247.9 ms