Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 CBX1P2-201ENST00000453841 458 ntBASIC5.61□□□□□ -1.51
NR1H2P55055 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC5.61□□□□□ -1.51
NR1H2P55055 AC124945.1-201ENST00000485133 188 ntBASIC5.61□□□□□ -1.51
NR1H2P55055 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
NR1H2P55055 AC093763.2-201ENST00000505334 1223 ntBASIC5.61□□□□□ -1.51
NR1H2P55055 AC011411.1-201ENST00000509592 876 ntBASIC5.61□□□□□ -1.51
NR1H2P55055 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC5.61□□□□□ -1.51
NR1H2P55055 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC5.61□□□□□ -1.51
NR1H2P55055 MTCO1P4-201ENST00000520516 1409 ntBASIC5.61□□□□□ -1.51
NR1H2P55055 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
NR1H2P55055 AL133399.1-201ENST00000527476 298 ntBASIC5.61□□□□□ -1.51
NR1H2P55055 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC5.61□□□□□ -1.51
NR1H2P55055 AC008055.1-201ENST00000547032 609 ntBASIC5.61□□□□□ -1.51
NR1H2P55055 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC5.61□□□□□ -1.51
NR1H2P55055 AC126615.2-201ENST00000553003 515 ntBASIC5.61□□□□□ -1.51
NR1H2P55055 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC5.61□□□□□ -1.51
NR1H2P55055 AC090826.1-203ENST00000569235 490 ntBASIC5.61□□□□□ -1.51
NR1H2P55055 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC5.61□□□□□ -1.51
NR1H2P55055 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
NR1H2P55055 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC5.61□□□□□ -1.51
NR1H2P55055 AL603750.1-201ENST00000624216 1717 ntBASIC5.61□□□□□ -1.51
NR1H2P55055 AP003497.2-201ENST00000624220 967 ntBASIC5.61□□□□□ -1.51
NR1H2P55055 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC5.61□□□□□ -1.51
NR1H2P55055 DRG1-207ENST00000629688 309 ntTSL 5 BASIC5.61□□□□□ -1.51
NR1H2P55055 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
NR1H2P55055 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
NR1H2P55055 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
NR1H2P55055 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
NR1H2P55055 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
NR1H2P55055 AC018809.2-201ENST00000602436 3823 ntBASIC5.6□□□□□ -1.51
NR1H2P55055 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC5.6□□□□□ -1.51
NR1H2P55055 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
NR1H2P55055 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
NR1H2P55055 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC5.6□□□□□ -1.51
NR1H2P55055 RNA5SP435-201ENST00000364044 108 ntBASIC5.6□□□□□ -1.51
NR1H2P55055 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
NR1H2P55055 RPL11P3-201ENST00000395256 523 ntBASIC5.6□□□□□ -1.51
NR1H2P55055 MTND2P9-201ENST00000422293 931 ntBASIC5.6□□□□□ -1.51
NR1H2P55055 IPPKP1-201ENST00000422501 768 ntBASIC5.6□□□□□ -1.51
NR1H2P55055 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC5.6□□□□□ -1.51
NR1H2P55055 UBE2D3P3-201ENST00000426992 425 ntBASIC5.6□□□□□ -1.51
NR1H2P55055 HSFY7P-201ENST00000432672 318 ntBASIC5.6□□□□□ -1.51
NR1H2P55055 HSFY8P-201ENST00000437934 318 ntBASIC5.6□□□□□ -1.51
NR1H2P55055 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC5.6□□□□□ -1.51
NR1H2P55055 DNAJA1P5-201ENST00000440278 943 ntBASIC5.6□□□□□ -1.51
NR1H2P55055 CUBNP2-201ENST00000443534 1139 ntBASIC5.6□□□□□ -1.51
NR1H2P55055 CYCSP51-201ENST00000443545 318 ntBASIC5.6□□□□□ -1.51
NR1H2P55055 BCAP29-207ENST00000445771 1157 ntTSL 5 BASIC5.6□□□□□ -1.51
NR1H2P55055 AC022498.1-201ENST00000449845 696 ntTSL 3 BASIC5.6□□□□□ -1.51
NR1H2P55055 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC5.6□□□□□ -1.51
NR1H2P55055 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC5.6□□□□□ -1.51
NR1H2P55055 HSFY5P-201ENST00000453726 309 ntBASIC5.6□□□□□ -1.51
NR1H2P55055 AC009963.3-201ENST00000458090 486 ntBASIC5.6□□□□□ -1.51
NR1H2P55055 AC010343.2-201ENST00000510162 224 ntBASIC5.6□□□□□ -1.51
NR1H2P55055 SNX18P25-201ENST00000510539 758 ntBASIC5.6□□□□□ -1.51
NR1H2P55055 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC5.6□□□□□ -1.51
NR1H2P55055 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC5.6□□□□□ -1.51
NR1H2P55055 CIR1P1-201ENST00000524055 1133 ntBASIC5.6□□□□□ -1.51
NR1H2P55055 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC5.6□□□□□ -1.51
NR1H2P55055 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC5.6□□□□□ -1.51
NR1H2P55055 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC5.6□□□□□ -1.51
NR1H2P55055 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC5.6□□□□□ -1.51
NR1H2P55055 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
NR1H2P55055 UBTFL9-201ENST00000534504 1148 ntBASIC5.6□□□□□ -1.51
NR1H2P55055 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC5.6□□□□□ -1.51
NR1H2P55055 AC090709.1-201ENST00000548384 716 ntTSL 3 BASIC5.6□□□□□ -1.51
NR1H2P55055 AC139697.1-201ENST00000548429 745 ntBASIC5.6□□□□□ -1.51
NR1H2P55055 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC5.6□□□□□ -1.51
NR1H2P55055 AL163952.1-202ENST00000569625 600 ntBASIC5.6□□□□□ -1.51
NR1H2P55055 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC5.6□□□□□ -1.51
NR1H2P55055 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC5.6□□□□□ -1.51
NR1H2P55055 AC015911.5-201ENST00000587076 451 ntBASIC5.6□□□□□ -1.51
NR1H2P55055 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC5.6□□□□□ -1.51
NR1H2P55055 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
NR1H2P55055 AL138895.2-201ENST00000603019 178 ntBASIC5.6□□□□□ -1.51
NR1H2P55055 AC005034.4-201ENST00000603612 899 ntBASIC5.6□□□□□ -1.51
NR1H2P55055 AC105148.1-201ENST00000604961 409 ntBASIC5.6□□□□□ -1.51
NR1H2P55055 BX323046.1-201ENST00000610145 535 ntBASIC5.6□□□□□ -1.51
NR1H2P55055 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC5.6□□□□□ -1.51
NR1H2P55055 MIR6133-201ENST00000617057 108 ntBASIC5.6□□□□□ -1.51
NR1H2P55055 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC5.6□□□□□ -1.51
NR1H2P55055 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
NR1H2P55055 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
NR1H2P55055 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.6□□□□□ -1.51
NR1H2P55055 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
NR1H2P55055 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.6□□□□□ -1.51
NR1H2P55055 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.6□□□□□ -1.51
NR1H2P55055 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.6□□□□□ -1.51
NR1H2P55055 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
NR1H2P55055 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
NR1H2P55055 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC5.6□□□□□ -1.51
NR1H2P55055 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
NR1H2P55055 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
NR1H2P55055 AL137141.1-201ENST00000624622 4836 ntBASIC5.59□□□□□ -1.51
NR1H2P55055 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
NR1H2P55055 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC5.59□□□□□ -1.51
NR1H2P55055 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
NR1H2P55055 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC5.59□□□□□ -1.51
NR1H2P55055 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
NR1H2P55055 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 161.6 ms