Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 AC135178.6-201ENST00000605314 398 ntBASIC6.1□□□□□ -1.43
COPB1P53618 AC063944.3-201ENST00000609969 533 ntBASIC6.1□□□□□ -1.43
COPB1P53618 AL096712.1-201ENST00000614561 159 ntBASIC6.1□□□□□ -1.43
COPB1P53618 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC6.1□□□□□ -1.43
COPB1P53618 AC074276.2-201ENST00000619891 348 ntBASIC6.1□□□□□ -1.43
COPB1P53618 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
COPB1P53618 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
COPB1P53618 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
COPB1P53618 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
COPB1P53618 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
COPB1P53618 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.43
COPB1P53618 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
COPB1P53618 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
COPB1P53618 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
COPB1P53618 AC100757.1-201ENST00000616872 1835 ntBASIC6.09□□□□□ -1.43
COPB1P53618 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
COPB1P53618 LARS-201ENST00000274562 2213 ntTSL 2 BASIC6.09□□□□□ -1.43
COPB1P53618 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
COPB1P53618 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
COPB1P53618 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
COPB1P53618 RN7SKP275-201ENST00000364626 301 ntBASIC6.09□□□□□ -1.43
COPB1P53618 AC004386.1-201ENST00000393214 761 ntBASIC6.09□□□□□ -1.43
COPB1P53618 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC6.09□□□□□ -1.43
COPB1P53618 PPIAP9-201ENST00000403866 498 ntBASIC6.09□□□□□ -1.43
COPB1P53618 MIR1203-201ENST00000408812 85 ntBASIC6.09□□□□□ -1.43
COPB1P53618 VN1R37P-201ENST00000419096 748 ntBASIC6.09□□□□□ -1.43
COPB1P53618 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC6.09□□□□□ -1.43
COPB1P53618 AC007161.1-204ENST00000423039 460 ntBASIC6.09□□□□□ -1.43
COPB1P53618 VTI1BP4-201ENST00000427516 527 ntBASIC6.09□□□□□ -1.43
COPB1P53618 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC6.09□□□□□ -1.43
COPB1P53618 AC006335.2-201ENST00000437993 330 ntBASIC6.09□□□□□ -1.43
COPB1P53618 MTATP6P14-201ENST00000455189 673 ntBASIC6.09□□□□□ -1.43
COPB1P53618 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC6.09□□□□□ -1.43
COPB1P53618 RN7SL583P-201ENST00000475692 287 ntBASIC6.09□□□□□ -1.43
COPB1P53618 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC6.09□□□□□ -1.43
COPB1P53618 AC112184.1-201ENST00000505179 312 ntBASIC6.09□□□□□ -1.43
COPB1P53618 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC6.09□□□□□ -1.43
COPB1P53618 RNU6-943P-201ENST00000516960 98 ntBASIC6.09□□□□□ -1.43
COPB1P53618 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC6.09□□□□□ -1.43
COPB1P53618 AP000648.1-201ENST00000529682 397 ntBASIC6.09□□□□□ -1.43
COPB1P53618 AC068339.2-201ENST00000534395 618 ntBASIC6.09□□□□□ -1.43
COPB1P53618 CKS1BP1-201ENST00000555221 240 ntBASIC6.09□□□□□ -1.43
COPB1P53618 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC6.09□□□□□ -1.43
COPB1P53618 DPPA2P4-201ENST00000563717 878 ntBASIC6.09□□□□□ -1.43
COPB1P53618 AC079148.1-201ENST00000565944 819 ntBASIC6.09□□□□□ -1.43
COPB1P53618 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC6.09□□□□□ -1.43
COPB1P53618 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC6.09□□□□□ -1.43
COPB1P53618 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC6.09□□□□□ -1.43
COPB1P53618 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC6.09□□□□□ -1.43
COPB1P53618 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC6.09□□□□□ -1.43
COPB1P53618 AL031601.1-201ENST00000605702 394 ntBASIC6.09□□□□□ -1.43
COPB1P53618 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC6.09□□□□□ -1.43
COPB1P53618 AC112503.2-201ENST00000609005 552 ntBASIC6.09□□□□□ -1.43
COPB1P53618 MIR4302-201ENST00000638058 60 ntBASIC6.09□□□□□ -1.43
COPB1P53618 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
COPB1P53618 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
COPB1P53618 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC6.09□□□□□ -1.43
COPB1P53618 MT-RNR2-201ENST00000387347 1559 ntBASIC6.09□□□□□ -1.43
COPB1P53618 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
COPB1P53618 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
COPB1P53618 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC6.09□□□□□ -1.44
COPB1P53618 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC6.08□□□□□ -1.44
COPB1P53618 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
COPB1P53618 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
COPB1P53618 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
COPB1P53618 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC6.08□□□□□ -1.44
COPB1P53618 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
COPB1P53618 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
COPB1P53618 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
COPB1P53618 AC005522.1-201ENST00000395416 346 ntBASIC6.08□□□□□ -1.44
COPB1P53618 AL356057.1-202ENST00000402263 756 ntBASIC6.08□□□□□ -1.44
COPB1P53618 AL353692.2-201ENST00000407054 335 ntBASIC6.08□□□□□ -1.44
COPB1P53618 HYALP1-201ENST00000417674 1279 ntBASIC6.08□□□□□ -1.44
COPB1P53618 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC6.08□□□□□ -1.44
COPB1P53618 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
COPB1P53618 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC6.08□□□□□ -1.44
COPB1P53618 AL136231.1-201ENST00000429407 730 ntBASIC6.08□□□□□ -1.44
COPB1P53618 HMGB3P24-201ENST00000433260 622 ntBASIC6.08□□□□□ -1.44
COPB1P53618 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC6.08□□□□□ -1.44
COPB1P53618 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC6.08□□□□□ -1.44
COPB1P53618 AC078857.1-201ENST00000469870 667 ntBASIC6.08□□□□□ -1.44
COPB1P53618 RPS3AP15-201ENST00000483874 781 ntBASIC6.08□□□□□ -1.44
COPB1P53618 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC6.08□□□□□ -1.44
COPB1P53618 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
COPB1P53618 SSR3-208ENST00000496050 579 ntTSL 4 BASIC6.08□□□□□ -1.44
COPB1P53618 NENFP3-201ENST00000503735 313 ntBASIC6.08□□□□□ -1.44
COPB1P53618 AC011411.1-201ENST00000509592 876 ntBASIC6.08□□□□□ -1.44
COPB1P53618 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC6.08□□□□□ -1.44
COPB1P53618 AC021193.1-201ENST00000511607 420 ntBASIC6.08□□□□□ -1.44
COPB1P53618 AC114781.3-201ENST00000512083 142 ntBASIC6.08□□□□□ -1.44
COPB1P53618 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC6.08□□□□□ -1.44
COPB1P53618 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
COPB1P53618 AL121594.4-201ENST00000556211 1196 ntBASIC6.08□□□□□ -1.44
COPB1P53618 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC6.08□□□□□ -1.44
COPB1P53618 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
COPB1P53618 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
COPB1P53618 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC6.08□□□□□ -1.44
COPB1P53618 H3F3BP2-201ENST00000583907 357 ntBASIC6.08□□□□□ -1.44
COPB1P53618 VN1R81P-201ENST00000602085 372 ntBASIC6.08□□□□□ -1.44
COPB1P53618 AL450270.1-201ENST00000606160 391 ntBASIC6.08□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms