Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC4.73□□□□□ -1.65
HCFC1P51610 HSPA8P14-201ENST00000552265 1805 ntBASIC4.73□□□□□ -1.65
HCFC1P51610 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
HCFC1P51610 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
HCFC1P51610 PANDAR-201ENST00000629595 1506 ntBASIC4.73□□□□□ -1.65
HCFC1P51610 AC004076.2-201ENST00000620532 3323 ntBASIC4.73□□□□□ -1.65
HCFC1P51610 AC022417.1-201ENST00000624768 1303 ntBASIC4.73□□□□□ -1.65
HCFC1P51610 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
HCFC1P51610 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
HCFC1P51610 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
HCFC1P51610 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
HCFC1P51610 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
HCFC1P51610 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
HCFC1P51610 NIT2-201ENST00000394140 7289 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
HCFC1P51610 CASC19-221ENST00000641309 1382 ntBASIC4.73□□□□□ -1.65
HCFC1P51610 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC4.73□□□□□ -1.65
HCFC1P51610 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
HCFC1P51610 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC4.73□□□□□ -1.65
HCFC1P51610 AC013442.1-201ENST00000397347 228 ntBASIC4.73□□□□□ -1.65
HCFC1P51610 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC4.73□□□□□ -1.65
HCFC1P51610 OR10T1P-201ENST00000424327 947 ntBASIC4.73□□□□□ -1.65
HCFC1P51610 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC4.73□□□□□ -1.65
HCFC1P51610 TAAR4P-201ENST00000454843 1039 ntBASIC4.73□□□□□ -1.65
HCFC1P51610 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC4.73□□□□□ -1.65
HCFC1P51610 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC4.73□□□□□ -1.65
HCFC1P51610 MIR4433B-201ENST00000581329 102 ntBASIC4.73□□□□□ -1.65
HCFC1P51610 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC4.73□□□□□ -1.65
HCFC1P51610 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC4.73□□□□□ -1.65
HCFC1P51610 AC093799.2-201ENST00000610062 578 ntBASIC4.73□□□□□ -1.65
HCFC1P51610 AC239809.3-202ENST00000628902 686 ntTSL 5 BASIC4.73□□□□□ -1.65
HCFC1P51610 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
HCFC1P51610 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC4.73□□□□□ -1.65
HCFC1P51610 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
HCFC1P51610 MFSD8-216ENST00000641147 4009 ntBASIC4.72□□□□□ -1.65
HCFC1P51610 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC4.72□□□□□ -1.65
HCFC1P51610 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC4.72□□□□□ -1.65
HCFC1P51610 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC4.72□□□□□ -1.65
HCFC1P51610 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
HCFC1P51610 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
HCFC1P51610 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC4.72□□□□□ -1.65
HCFC1P51610 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC4.72□□□□□ -1.65
HCFC1P51610 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
HCFC1P51610 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
HCFC1P51610 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
HCFC1P51610 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
HCFC1P51610 AL589826.1-201ENST00000340697 249 ntBASIC4.72□□□□□ -1.65
HCFC1P51610 SNORD56.6-201ENST00000384569 71 ntBASIC4.72□□□□□ -1.65
HCFC1P51610 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC4.72□□□□□ -1.65
HCFC1P51610 FAR2P2-201ENST00000413041 594 ntBASIC4.72□□□□□ -1.65
HCFC1P51610 RPL26P29-201ENST00000415623 438 ntBASIC4.72□□□□□ -1.65
HCFC1P51610 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC4.72□□□□□ -1.65
HCFC1P51610 FAR2P4-202ENST00000425399 584 ntBASIC4.72□□□□□ -1.65
HCFC1P51610 AC092017.2-201ENST00000427600 362 ntBASIC4.72□□□□□ -1.65
HCFC1P51610 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC4.72□□□□□ -1.65
HCFC1P51610 AL360081.1-201ENST00000428299 555 ntBASIC4.72□□□□□ -1.65
HCFC1P51610 RPS3AP38-201ENST00000435889 763 ntBASIC4.72□□□□□ -1.65
HCFC1P51610 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC4.72□□□□□ -1.65
HCFC1P51610 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC4.72□□□□□ -1.65
HCFC1P51610 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC4.72□□□□□ -1.65
HCFC1P51610 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC4.72□□□□□ -1.65
HCFC1P51610 FTH1P2-201ENST00000466086 412 ntBASIC4.72□□□□□ -1.65
HCFC1P51610 AC092905.1-201ENST00000467527 949 ntBASIC4.72□□□□□ -1.65
HCFC1P51610 AC008897.1-201ENST00000494006 347 ntBASIC4.72□□□□□ -1.65
HCFC1P51610 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC4.72□□□□□ -1.65
HCFC1P51610 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC4.72□□□□□ -1.65
HCFC1P51610 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC4.72□□□□□ -1.65
HCFC1P51610 HMGB1P40-201ENST00000525121 540 ntBASIC4.72□□□□□ -1.65
HCFC1P51610 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC4.72□□□□□ -1.65
HCFC1P51610 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC4.72□□□□□ -1.65
HCFC1P51610 NAA60-237ENST00000615865 326 ntTSL 5 BASIC4.72□□□□□ -1.65
HCFC1P51610 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC4.72□□□□□ -1.65
HCFC1P51610 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC4.72□□□□□ -1.65
HCFC1P51610 AC074101.1-201ENST00000637861 241 ntBASIC4.72□□□□□ -1.65
HCFC1P51610 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
HCFC1P51610 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC4.72□□□□□ -1.65
HCFC1P51610 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
HCFC1P51610 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
HCFC1P51610 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
HCFC1P51610 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
HCFC1P51610 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
HCFC1P51610 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
HCFC1P51610 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
HCFC1P51610 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC4.72□□□□□ -1.65
HCFC1P51610 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC4.72□□□□□ -1.65
HCFC1P51610 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
HCFC1P51610 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
HCFC1P51610 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC4.72□□□□□ -1.65
HCFC1P51610 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC4.72□□□□□ -1.65
HCFC1P51610 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
HCFC1P51610 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
HCFC1P51610 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
HCFC1P51610 SNURFL-201ENST00000309296 343 ntBASIC4.72□□□□□ -1.65
HCFC1P51610 RNA5SP455-201ENST00000365190 119 ntBASIC4.72□□□□□ -1.65
HCFC1P51610 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
HCFC1P51610 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC4.72□□□□□ -1.65
HCFC1P51610 AL133482.1-201ENST00000415988 498 ntBASIC4.72□□□□□ -1.65
HCFC1P51610 TMEM183AP1-205ENST00000432739 290 ntBASIC4.72□□□□□ -1.65
HCFC1P51610 AC091390.1-201ENST00000433904 331 ntBASIC4.72□□□□□ -1.65
HCFC1P51610 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC4.72□□□□□ -1.65
HCFC1P51610 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms