Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC5.47□□□□□ -1.53
HNF4AP41235 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
HNF4AP41235 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC5.47□□□□□ -1.53
HNF4AP41235 AC046176.1-201ENST00000435260 1170 ntBASIC5.47□□□□□ -1.53
HNF4AP41235 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
HNF4AP41235 RPL10P17-201ENST00000453852 316 ntBASIC5.47□□□□□ -1.53
HNF4AP41235 NXT1P1-201ENST00000458481 316 ntBASIC5.47□□□□□ -1.53
HNF4AP41235 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC5.47□□□□□ -1.53
HNF4AP41235 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.47□□□□□ -1.53
HNF4AP41235 AC117394.1-201ENST00000477323 567 ntBASIC5.47□□□□□ -1.53
HNF4AP41235 RPS17P5-201ENST00000498293 408 ntBASIC5.47□□□□□ -1.53
HNF4AP41235 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5.47□□□□□ -1.53
HNF4AP41235 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC5.47□□□□□ -1.53
HNF4AP41235 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
HNF4AP41235 AL671862.1-201ENST00000515851 349 ntBASIC5.47□□□□□ -1.53
HNF4AP41235 PMS2P3-207ENST00000529061 717 ntBASIC5.47□□□□□ -1.53
HNF4AP41235 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC5.47□□□□□ -1.53
HNF4AP41235 AC027216.1-201ENST00000577726 685 ntBASIC5.47□□□□□ -1.53
HNF4AP41235 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC5.47□□□□□ -1.53
HNF4AP41235 PACRG-210ENST00000611387 279 ntTSL 5 BASIC5.47□□□□□ -1.53
HNF4AP41235 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
HNF4AP41235 CCL14-204ENST00000622526 472 ntTSL 3 BASIC5.47□□□□□ -1.53
HNF4AP41235 AP001962.1-201ENST00000624114 559 ntBASIC5.47□□□□□ -1.53
HNF4AP41235 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC5.47□□□□□ -1.53
HNF4AP41235 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
HNF4AP41235 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
HNF4AP41235 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC5.47□□□□□ -1.53
HNF4AP41235 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
HNF4AP41235 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
HNF4AP41235 CASC19-284ENST00000642142 1868 ntBASIC5.47□□□□□ -1.53
HNF4AP41235 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
HNF4AP41235 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
HNF4AP41235 MRE11P1-201ENST00000464884 2127 ntBASIC5.47□□□□□ -1.53
HNF4AP41235 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
HNF4AP41235 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
HNF4AP41235 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
HNF4AP41235 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
HNF4AP41235 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.46□□□□□ -1.53
HNF4AP41235 SOCS5P3-201ENST00000425115 1576 ntBASIC5.46□□□□□ -1.53
HNF4AP41235 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.53
HNF4AP41235 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
HNF4AP41235 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
HNF4AP41235 RN7SKP185-201ENST00000362813 326 ntBASIC5.46□□□□□ -1.54
HNF4AP41235 RN7SKP69-201ENST00000365390 305 ntBASIC5.46□□□□□ -1.54
HNF4AP41235 RNA5SP30-201ENST00000365552 115 ntBASIC5.46□□□□□ -1.54
HNF4AP41235 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
HNF4AP41235 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
HNF4AP41235 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC5.46□□□□□ -1.54
HNF4AP41235 VDAC2P1-201ENST00000399358 958 ntBASIC5.46□□□□□ -1.54
HNF4AP41235 HMGB1P20-201ENST00000402555 677 ntBASIC5.46□□□□□ -1.54
HNF4AP41235 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.46□□□□□ -1.54
HNF4AP41235 RPS3AP2-201ENST00000407190 754 ntBASIC5.46□□□□□ -1.54
HNF4AP41235 AC096921.1-201ENST00000411661 375 ntBASIC5.46□□□□□ -1.54
HNF4AP41235 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC5.46□□□□□ -1.54
HNF4AP41235 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC5.46□□□□□ -1.54
HNF4AP41235 RPS6P23-201ENST00000413224 722 ntBASIC5.46□□□□□ -1.54
HNF4AP41235 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
HNF4AP41235 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC5.46□□□□□ -1.54
HNF4AP41235 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC5.46□□□□□ -1.54
HNF4AP41235 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC5.46□□□□□ -1.54
HNF4AP41235 PPP2R2DP1-201ENST00000420526 637 ntBASIC5.46□□□□□ -1.54
HNF4AP41235 AC006065.1-201ENST00000422539 802 ntBASIC5.46□□□□□ -1.54
HNF4AP41235 AC127526.2-201ENST00000426436 775 ntBASIC5.46□□□□□ -1.54
HNF4AP41235 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC5.46□□□□□ -1.54
HNF4AP41235 AC138761.5-201ENST00000433967 325 ntBASIC5.46□□□□□ -1.54
HNF4AP41235 MTND2P40-201ENST00000436718 841 ntBASIC5.46□□□□□ -1.54
HNF4AP41235 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC5.46□□□□□ -1.54
HNF4AP41235 CACYBPP1-201ENST00000438592 684 ntBASIC5.46□□□□□ -1.54
HNF4AP41235 NANOGP9-201ENST00000439890 892 ntBASIC5.46□□□□□ -1.54
HNF4AP41235 LINC02210-201ENST00000444561 288 ntBASIC5.46□□□□□ -1.54
HNF4AP41235 RPL36AP39-201ENST00000445859 318 ntBASIC5.46□□□□□ -1.54
HNF4AP41235 CASP3P1-201ENST00000446037 609 ntBASIC5.46□□□□□ -1.54
HNF4AP41235 AC243772.1-201ENST00000451620 410 ntBASIC5.46□□□□□ -1.54
HNF4AP41235 EIF2S2P4-201ENST00000461070 984 ntBASIC5.46□□□□□ -1.54
HNF4AP41235 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
HNF4AP41235 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC5.46□□□□□ -1.54
HNF4AP41235 RPS3AP15-201ENST00000483874 781 ntBASIC5.46□□□□□ -1.54
HNF4AP41235 SNORD46.2-201ENST00000516021 102 ntBASIC5.46□□□□□ -1.54
HNF4AP41235 RNU6-551P-201ENST00000516661 103 ntBASIC5.46□□□□□ -1.54
HNF4AP41235 NPM1P35-201ENST00000533043 868 ntBASIC5.46□□□□□ -1.54
HNF4AP41235 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC5.46□□□□□ -1.54
HNF4AP41235 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC5.46□□□□□ -1.54
HNF4AP41235 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC5.46□□□□□ -1.54
HNF4AP41235 MIR4311-201ENST00000580794 100 ntBASIC5.46□□□□□ -1.54
HNF4AP41235 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC5.46□□□□□ -1.54
HNF4AP41235 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC5.46□□□□□ -1.54
HNF4AP41235 AC063977.5-201ENST00000601044 974 ntBASIC5.46□□□□□ -1.54
HNF4AP41235 AC022387.2-201ENST00000604050 448 ntBASIC5.46□□□□□ -1.54
HNF4AP41235 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC5.46□□□□□ -1.54
HNF4AP41235 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC5.46□□□□□ -1.54
HNF4AP41235 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC5.46□□□□□ -1.54
HNF4AP41235 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC5.46□□□□□ -1.54
HNF4AP41235 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC5.46□□□□□ -1.54
HNF4AP41235 AC087565.3-203ENST00000641018 837 ntBASIC5.46□□□□□ -1.54
HNF4AP41235 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
HNF4AP41235 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
HNF4AP41235 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC5.46□□□□□ -1.54
HNF4AP41235 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
HNF4AP41235 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.54
HNF4AP41235 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.46□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms